Protein–RNA interactions for Protein: Q16384

SSX1, Protein SSX1, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1Q16384 AP002802.2-201ENST00000605877 235 ntBASIC2.08□□□□□ -2.08
SSX1Q16384 AL390208.1-201ENST00000605885 644 ntBASIC2.08□□□□□ -2.08
SSX1Q16384 AL158211.2-201ENST00000607282 395 ntBASIC2.08□□□□□ -2.08
SSX1Q16384 AC004067.1-201ENST00000608733 700 ntBASIC2.08□□□□□ -2.08
SSX1Q16384 AC243773.3-201ENST00000613270 256 ntBASIC2.08□□□□□ -2.08
SSX1Q16384 MIR6895-201ENST00000613497 78 ntBASIC2.08□□□□□ -2.08
SSX1Q16384 AL590099.1-201ENST00000615276 138 ntBASIC2.08□□□□□ -2.08
SSX1Q16384 AC018926.1-201ENST00000616335 435 ntBASIC2.08□□□□□ -2.08
SSX1Q16384 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.08□□□□□ -2.08
SSX1Q16384 AP000943.4-201ENST00000622912 357 ntBASIC2.08□□□□□ -2.08
SSX1Q16384 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.08□□□□□ -2.08
SSX1Q16384 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.08□□□□□ -2.08
SSX1Q16384 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.08□□□□□ -2.08
SSX1Q16384 AC016717.2-201ENST00000609089 5141 ntBASIC2.08□□□□□ -2.08
SSX1Q16384 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
SSX1Q16384 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.08□□□□□ -2.08
SSX1Q16384 AC005832.2-201ENST00000538921 1430 ntBASIC2.08□□□□□ -2.08
SSX1Q16384 CDR1-202ENST00000625883 1485 ntBASIC2.07□□□□□ -2.08
SSX1Q16384 SET-203ENST00000372688 801 ntTSL 2 BASIC2.07□□□□□ -2.08
SSX1Q16384 SNORA51.11-201ENST00000384442 131 ntBASIC2.07□□□□□ -2.08
SSX1Q16384 TAS2R15P-201ENST00000390674 928 ntBASIC2.07□□□□□ -2.08
SSX1Q16384 RNA5SP171-201ENST00000391071 115 ntBASIC2.07□□□□□ -2.08
SSX1Q16384 RNA5SP354-201ENST00000391247 136 ntBASIC2.07□□□□□ -2.08
SSX1Q16384 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
SSX1Q16384 RNU6-193P-201ENST00000410977 107 ntBASIC2.07□□□□□ -2.08
SSX1Q16384 AC007064.1-201ENST00000412238 351 ntBASIC2.07□□□□□ -2.08
SSX1Q16384 Z85995.1-201ENST00000415547 335 ntBASIC2.07□□□□□ -2.08
SSX1Q16384 USP9YP21-201ENST00000420603 432 ntBASIC2.07□□□□□ -2.08
SSX1Q16384 AC099548.1-201ENST00000421443 426 ntBASIC2.07□□□□□ -2.08
SSX1Q16384 MTCO2P5-201ENST00000422621 426 ntBASIC2.07□□□□□ -2.08
SSX1Q16384 AC019097.1-201ENST00000424783 735 ntBASIC2.07□□□□□ -2.08
SSX1Q16384 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2.07□□□□□ -2.08
SSX1Q16384 FCF1P1-201ENST00000432690 571 ntBASIC2.07□□□□□ -2.08
SSX1Q16384 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
SSX1Q16384 USP9YP22-201ENST00000438971 294 ntBASIC2.07□□□□□ -2.08
SSX1Q16384 AC107083.1-201ENST00000439643 279 ntBASIC2.07□□□□□ -2.08
SSX1Q16384 AC104389.3-201ENST00000445629 235 ntBASIC2.07□□□□□ -2.08
SSX1Q16384 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.07□□□□□ -2.08
SSX1Q16384 AC092155.2-201ENST00000454675 477 ntBASIC2.07□□□□□ -2.08
SSX1Q16384 RNU7-23P-201ENST00000459465 62 ntBASIC2.07□□□□□ -2.08
SSX1Q16384 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.07□□□□□ -2.08
SSX1Q16384 AL049874.1-201ENST00000489560 388 ntBASIC2.07□□□□□ -2.08
SSX1Q16384 AC114981.1-201ENST00000503897 678 ntBASIC2.07□□□□□ -2.08
SSX1Q16384 OR5BM1P-201ENST00000512021 366 ntBASIC2.07□□□□□ -2.08
SSX1Q16384 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.07□□□□□ -2.08
SSX1Q16384 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC2.07□□□□□ -2.08
SSX1Q16384 RN7SKP24-201ENST00000515888 284 ntBASIC2.07□□□□□ -2.08
SSX1Q16384 SCARNA15.2-201ENST00000516409 127 ntBASIC2.07□□□□□ -2.08
SSX1Q16384 RNU6-1256P-201ENST00000516539 103 ntBASIC2.07□□□□□ -2.08
SSX1Q16384 RNU6-528P-201ENST00000516926 100 ntBASIC2.07□□□□□ -2.08
SSX1Q16384 RNA5SP471-201ENST00000516971 106 ntBASIC2.07□□□□□ -2.08
SSX1Q16384 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.07□□□□□ -2.08
SSX1Q16384 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SSX1Q16384 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SSX1Q16384 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.07□□□□□ -2.08
SSX1Q16384 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.07□□□□□ -2.08
SSX1Q16384 AC025281.1-201ENST00000567026 265 ntBASIC2.07□□□□□ -2.08
SSX1Q16384 AC090615.1-201ENST00000577519 154 ntBASIC2.07□□□□□ -2.08
SSX1Q16384 MIR3912-201ENST00000577566 105 ntBASIC2.07□□□□□ -2.08
SSX1Q16384 AC090616.3-201ENST00000582184 217 ntBASIC2.07□□□□□ -2.08
SSX1Q16384 VN1R78P-201ENST00000597393 564 ntBASIC2.07□□□□□ -2.08
SSX1Q16384 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SSX1Q16384 UCA1.1-201ENST00000620952 75 ntBASIC2.07□□□□□ -2.08
SSX1Q16384 AC092608.2-201ENST00000624427 218 ntBASIC2.07□□□□□ -2.08
SSX1Q16384 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.07□□□□□ -2.08
SSX1Q16384 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
SSX1Q16384 OR4G2P-202ENST00000641004 1759 ntBASIC2.07□□□□□ -2.08
SSX1Q16384 AL356473.1-201ENST00000406203 1408 ntBASIC2.07□□□□□ -2.08
SSX1Q16384 AL049641.1-201ENST00000441055 1948 ntBASIC2.07□□□□□ -2.08
SSX1Q16384 AC005539.1-201ENST00000443768 1479 ntBASIC2.07□□□□□ -2.08
SSX1Q16384 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.06□□□□□ -2.08
SSX1Q16384 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SSX1Q16384 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
SSX1Q16384 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SSX1Q16384 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.06□□□□□ -2.08
SSX1Q16384 RNU6-28P-201ENST00000362378 107 ntBASIC2.06□□□□□ -2.08
SSX1Q16384 RNU1-105P-201ENST00000363470 161 ntBASIC2.06□□□□□ -2.08
SSX1Q16384 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.06□□□□□ -2.08
SSX1Q16384 MIR518C-201ENST00000384822 101 ntBASIC2.06□□□□□ -2.08
SSX1Q16384 AL139039.1-201ENST00000401900 692 ntBASIC2.06□□□□□ -2.08
SSX1Q16384 HMGB1P17-201ENST00000403495 628 ntBASIC2.06□□□□□ -2.08
SSX1Q16384 HMGB3P2-201ENST00000411913 584 ntBASIC2.06□□□□□ -2.08
SSX1Q16384 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.06□□□□□ -2.08
SSX1Q16384 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC2.06□□□□□ -2.08
SSX1Q16384 AC007435.1-201ENST00000421086 415 ntBASIC2.06□□□□□ -2.08
SSX1Q16384 AL139421.1-201ENST00000423010 169 ntBASIC2.06□□□□□ -2.08
SSX1Q16384 AL590383.1-201ENST00000428602 75 ntBASIC2.06□□□□□ -2.08
SSX1Q16384 MTCYBP3-201ENST00000445588 1137 ntBASIC2.06□□□□□ -2.08
SSX1Q16384 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.06□□□□□ -2.08
SSX1Q16384 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.06□□□□□ -2.08
SSX1Q16384 RPL31P41-201ENST00000477967 372 ntBASIC2.06□□□□□ -2.08
SSX1Q16384 LARP1BP2-201ENST00000486594 519 ntBASIC2.06□□□□□ -2.08
SSX1Q16384 AC079804.2-201ENST00000490376 200 ntBASIC2.06□□□□□ -2.08
SSX1Q16384 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
SSX1Q16384 HMGB1P28-201ENST00000507778 552 ntBASIC2.06□□□□□ -2.08
SSX1Q16384 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SSX1Q16384 AC034159.1-201ENST00000513885 583 ntBASIC2.06□□□□□ -2.08
SSX1Q16384 RNU6-1225P-201ENST00000516336 65 ntBASIC2.06□□□□□ -2.08
SSX1Q16384 IGLV3-17-201ENST00000519099 244 ntBASIC2.06□□□□□ -2.08
SSX1Q16384 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 164.8 ms