Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.61□□□□□ -1.99
RAB40BQ12829 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC2.61□□□□□ -1.99
RAB40BQ12829 AC022447.3-201ENST00000506865 495 ntBASIC2.61□□□□□ -1.99
RAB40BQ12829 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC2.61□□□□□ -1.99
RAB40BQ12829 AP002748.2-201ENST00000528671 348 ntBASIC2.61□□□□□ -1.99
RAB40BQ12829 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
RAB40BQ12829 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.61□□□□□ -1.99
RAB40BQ12829 AC107016.2-201ENST00000547968 190 ntBASIC2.61□□□□□ -1.99
RAB40BQ12829 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.61□□□□□ -1.99
RAB40BQ12829 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.61□□□□□ -1.99
RAB40BQ12829 AL354943.1-201ENST00000572103 781 ntBASIC2.61□□□□□ -1.99
RAB40BQ12829 AC136618.2-201ENST00000575091 400 ntBASIC2.61□□□□□ -1.99
RAB40BQ12829 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.61□□□□□ -1.99
RAB40BQ12829 BNIP3P23-201ENST00000599655 511 ntBASIC2.61□□□□□ -1.99
RAB40BQ12829 AC006539.2-201ENST00000601729 572 ntBASIC2.61□□□□□ -1.99
RAB40BQ12829 TUG1_2.1-201ENST00000614234 87 ntBASIC2.61□□□□□ -1.99
RAB40BQ12829 AC013476.2-201ENST00000614456 459 ntBASIC2.61□□□□□ -1.99
RAB40BQ12829 AC091953.5-201ENST00000622919 233 ntBASIC2.61□□□□□ -1.99
RAB40BQ12829 AL049641.1-201ENST00000441055 1948 ntBASIC2.61□□□□□ -1.99
RAB40BQ12829 AC007785.2-201ENST00000598627 1916 ntBASIC2.61□□□□□ -1.99
RAB40BQ12829 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
RAB40BQ12829 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
RAB40BQ12829 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.61□□□□□ -1.99
RAB40BQ12829 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.61□□□□□ -1.99
RAB40BQ12829 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
RAB40BQ12829 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.6□□□□□ -1.99
RAB40BQ12829 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.6□□□□□ -1.99
RAB40BQ12829 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.6□□□□□ -1.99
RAB40BQ12829 SNORA9.2-201ENST00000365361 133 ntBASIC2.6□□□□□ -1.99
RAB40BQ12829 RNA5SP88-201ENST00000365560 109 ntBASIC2.6□□□□□ -1.99
RAB40BQ12829 RNU6-198P-201ENST00000384258 104 ntBASIC2.6□□□□□ -1.99
RAB40BQ12829 MIR1305-201ENST00000408300 86 ntBASIC2.6□□□□□ -1.99
RAB40BQ12829 RPS3AP25-201ENST00000411660 793 ntBASIC2.6□□□□□ -1.99
RAB40BQ12829 Z85995.1-201ENST00000415547 335 ntBASIC2.6□□□□□ -1.99
RAB40BQ12829 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC2.6□□□□□ -1.99
RAB40BQ12829 RPL22P18-201ENST00000417197 377 ntBASIC2.6□□□□□ -1.99
RAB40BQ12829 AL022400.1-201ENST00000423946 935 ntBASIC2.6□□□□□ -1.99
RAB40BQ12829 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.6□□□□□ -1.99
RAB40BQ12829 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.6□□□□□ -1.99
RAB40BQ12829 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.6□□□□□ -1.99
RAB40BQ12829 CBWD4P-201ENST00000445695 655 ntBASIC2.6□□□□□ -1.99
RAB40BQ12829 Z75741.1-201ENST00000446793 314 ntBASIC2.6□□□□□ -1.99
RAB40BQ12829 AC093392.2-201ENST00000450682 337 ntBASIC2.6□□□□□ -1.99
RAB40BQ12829 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.6□□□□□ -1.99
RAB40BQ12829 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.6□□□□□ -1.99
RAB40BQ12829 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.6□□□□□ -1.99
RAB40BQ12829 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.6□□□□□ -1.99
RAB40BQ12829 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.6□□□□□ -1.99
RAB40BQ12829 snoU13.28-201ENST00000459235 104 ntBASIC2.6□□□□□ -1.99
RAB40BQ12829 AC008155.2-201ENST00000464337 397 ntBASIC2.6□□□□□ -1.99
RAB40BQ12829 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.6□□□□□ -1.99
RAB40BQ12829 RN7SL601P-201ENST00000471221 293 ntBASIC2.6□□□□□ -1.99
RAB40BQ12829 AC117440.1-201ENST00000474107 571 ntBASIC2.6□□□□□ -1.99
RAB40BQ12829 LARP1BP2-201ENST00000486594 519 ntBASIC2.6□□□□□ -1.99
RAB40BQ12829 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RAB40BQ12829 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.6□□□□□ -1.99
RAB40BQ12829 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC2.6□□□□□ -1.99
RAB40BQ12829 AC074250.1-201ENST00000511117 192 ntBASIC2.6□□□□□ -1.99
RAB40BQ12829 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.6□□□□□ -1.99
RAB40BQ12829 RN7SKP272-201ENST00000516988 232 ntBASIC2.6□□□□□ -1.99
RAB40BQ12829 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.6□□□□□ -1.99
RAB40BQ12829 AC068587.4-201ENST00000533893 186 ntBASIC2.6□□□□□ -1.99
RAB40BQ12829 AC023538.1-201ENST00000534576 736 ntBASIC2.6□□□□□ -1.99
RAB40BQ12829 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC2.6□□□□□ -1.99
RAB40BQ12829 ELOCP31-201ENST00000540463 467 ntBASIC2.6□□□□□ -1.99
RAB40BQ12829 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.6□□□□□ -1.99
RAB40BQ12829 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.6□□□□□ -1.99
RAB40BQ12829 AMZ2P1-203ENST00000565833 850 ntBASIC2.6□□□□□ -1.99
RAB40BQ12829 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.6□□□□□ -1.99
RAB40BQ12829 HMGB1P6-201ENST00000569046 646 ntBASIC2.6□□□□□ -1.99
RAB40BQ12829 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.6□□□□□ -1.99
RAB40BQ12829 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.6□□□□□ -1.99
RAB40BQ12829 MIR3605-201ENST00000583214 100 ntBASIC2.6□□□□□ -1.99
RAB40BQ12829 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.6□□□□□ -1.99
RAB40BQ12829 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.6□□□□□ -1.99
RAB40BQ12829 SRGNP1-201ENST00000603392 451 ntBASIC2.6□□□□□ -1.99
RAB40BQ12829 AC010133.1-201ENST00000615809 842 ntBASIC2.6□□□□□ -1.99
RAB40BQ12829 AC073308.1-201ENST00000623696 305 ntBASIC2.6□□□□□ -1.99
RAB40BQ12829 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.6□□□□□ -1.99
RAB40BQ12829 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
RAB40BQ12829 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.6□□□□□ -1.99
RAB40BQ12829 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RAB40BQ12829 AC091564.4-201ENST00000533934 2194 ntBASIC2.6□□□□□ -1.99
RAB40BQ12829 MTND5P1-201ENST00000445440 1375 ntBASIC2.6□□□□□ -1.99
RAB40BQ12829 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
RAB40BQ12829 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.59□□□□□ -1.99
RAB40BQ12829 RNU6-223P-201ENST00000362830 107 ntBASIC2.59□□□□□ -1.99
RAB40BQ12829 RNU6-270P-201ENST00000364131 105 ntBASIC2.59□□□□□ -1.99
RAB40BQ12829 SNORD46.1-201ENST00000364139 104 ntBASIC2.59□□□□□ -1.99
RAB40BQ12829 RNA5SP267-201ENST00000364893 126 ntBASIC2.59□□□□□ -1.99
RAB40BQ12829 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.59□□□□□ -1.99
RAB40BQ12829 RNU6-741P-201ENST00000383889 107 ntBASIC2.59□□□□□ -1.99
RAB40BQ12829 RNU6-1035P-201ENST00000384477 107 ntBASIC2.59□□□□□ -1.99
RAB40BQ12829 TXNP7-201ENST00000406296 293 ntBASIC2.59□□□□□ -1.99
RAB40BQ12829 RPS24P7-201ENST00000416921 246 ntBASIC2.59□□□□□ -1.99
RAB40BQ12829 AL158156.1-201ENST00000422509 473 ntBASIC2.59□□□□□ -1.99
RAB40BQ12829 AL445669.1-201ENST00000426743 755 ntBASIC2.59□□□□□ -1.99
RAB40BQ12829 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.59□□□□□ -1.99
RAB40BQ12829 SAR1AP4-201ENST00000429225 591 ntBASIC2.59□□□□□ -1.99
RAB40BQ12829 FAM103A2P-201ENST00000444122 354 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms