Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 RN7SKP192-201ENST00000411291 327 ntBASIC1.28□□□□□ -2.2
SSBP1Q04837 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.28□□□□□ -2.2
SSBP1Q04837 AC007560.1-201ENST00000426912 237 ntBASIC1.28□□□□□ -2.2
SSBP1Q04837 VN1R108P-201ENST00000431580 830 ntBASIC1.28□□□□□ -2.2
SSBP1Q04837 AC010881.1-201ENST00000433830 235 ntBASIC1.28□□□□□ -2.2
SSBP1Q04837 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC1.28□□□□□ -2.2
SSBP1Q04837 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC1.28□□□□□ -2.2
SSBP1Q04837 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC1.28□□□□□ -2.2
SSBP1Q04837 RPS15AP27-201ENST00000449183 343 ntBASIC1.28□□□□□ -2.2
SSBP1Q04837 TRGVB-201ENST00000453257 471 ntBASIC1.28□□□□□ -2.2
SSBP1Q04837 NDUFAF4P3-201ENST00000456468 525 ntBASIC1.28□□□□□ -2.2
SSBP1Q04837 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.28□□□□□ -2.2
SSBP1Q04837 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.28□□□□□ -2.2
SSBP1Q04837 AC008885.2-201ENST00000509506 930 ntBASIC1.28□□□□□ -2.2
SSBP1Q04837 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.28□□□□□ -2.2
SSBP1Q04837 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC1.28□□□□□ -2.2
SSBP1Q04837 AC117525.1-201ENST00000515228 503 ntBASIC1.28□□□□□ -2.2
SSBP1Q04837 RNU6-202P-201ENST00000515998 96 ntBASIC1.28□□□□□ -2.2
SSBP1Q04837 RNU6-250P-201ENST00000516958 103 ntBASIC1.28□□□□□ -2.2
SSBP1Q04837 SNORA31.18-201ENST00000517043 134 ntBASIC1.28□□□□□ -2.2
SSBP1Q04837 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.28□□□□□ -2.2
SSBP1Q04837 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.28□□□□□ -2.2
SSBP1Q04837 AC087276.1-201ENST00000529659 480 ntBASIC1.28□□□□□ -2.2
SSBP1Q04837 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.28□□□□□ -2.2
SSBP1Q04837 AC012254.4-201ENST00000588843 273 ntBASIC1.28□□□□□ -2.2
SSBP1Q04837 AC107214.2-201ENST00000608204 634 ntBASIC1.28□□□□□ -2.2
SSBP1Q04837 AC025594.3-201ENST00000613068 790 ntBASIC1.28□□□□□ -2.2
SSBP1Q04837 AP001486.3-201ENST00000615334 372 ntBASIC1.28□□□□□ -2.2
SSBP1Q04837 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC1.28□□□□□ -2.2
SSBP1Q04837 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC1.28□□□□□ -2.2
SSBP1Q04837 MIR7515-201ENST00000637837 67 ntBASIC1.28□□□□□ -2.2
SSBP1Q04837 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
SSBP1Q04837 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
SSBP1Q04837 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
SSBP1Q04837 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
SSBP1Q04837 MTND5P10-201ENST00000603719 1809 ntBASIC1.28□□□□□ -2.2
SSBP1Q04837 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.28□□□□□ -2.21
SSBP1Q04837 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.27□□□□□ -2.21
SSBP1Q04837 AC104454.1-201ENST00000421341 1401 ntBASIC1.27□□□□□ -2.21
SSBP1Q04837 AC011477.1-204ENST00000623416 1325 ntBASIC1.27□□□□□ -2.21
SSBP1Q04837 RNA5SP27-201ENST00000363839 119 ntBASIC1.27□□□□□ -2.21
SSBP1Q04837 AL136372.1-201ENST00000403060 228 ntBASIC1.27□□□□□ -2.21
SSBP1Q04837 MIR1304-201ENST00000408243 91 ntBASIC1.27□□□□□ -2.21
SSBP1Q04837 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.27□□□□□ -2.21
SSBP1Q04837 HMGB3P31-201ENST00000413333 595 ntBASIC1.27□□□□□ -2.21
SSBP1Q04837 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.27□□□□□ -2.21
SSBP1Q04837 AC098614.2-201ENST00000426040 255 ntBASIC1.27□□□□□ -2.21
SSBP1Q04837 AC234781.2-201ENST00000426370 994 ntBASIC1.27□□□□□ -2.21
SSBP1Q04837 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.27□□□□□ -2.21
SSBP1Q04837 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC1.27□□□□□ -2.21
SSBP1Q04837 MTND2P19-201ENST00000449129 1012 ntBASIC1.27□□□□□ -2.21
SSBP1Q04837 MTATP6P7-201ENST00000453315 681 ntBASIC1.27□□□□□ -2.21
SSBP1Q04837 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.27□□□□□ -2.21
SSBP1Q04837 KLF3P2-201ENST00000465138 268 ntBASIC1.27□□□□□ -2.21
SSBP1Q04837 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC1.27□□□□□ -2.21
SSBP1Q04837 KATNBL1P4-201ENST00000503545 918 ntBASIC1.27□□□□□ -2.21
SSBP1Q04837 AC118465.1-201ENST00000513820 1271 ntBASIC1.27□□□□□ -2.21
SSBP1Q04837 BTF3P12-201ENST00000519620 469 ntBASIC1.27□□□□□ -2.21
SSBP1Q04837 AC022880.1-201ENST00000534017 973 ntBASIC1.27□□□□□ -2.21
SSBP1Q04837 ARL2BPP2-201ENST00000550907 489 ntBASIC1.27□□□□□ -2.21
SSBP1Q04837 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC1.27□□□□□ -2.21
SSBP1Q04837 AL355812.1-201ENST00000603215 216 ntBASIC1.27□□□□□ -2.21
SSBP1Q04837 AL627230.6-201ENST00000611129 280 ntBASIC1.27□□□□□ -2.21
SSBP1Q04837 AC109809.1-201ENST00000619665 545 ntBASIC1.27□□□□□ -2.21
SSBP1Q04837 AC110994.2-201ENST00000635481 492 ntBASIC1.27□□□□□ -2.21
SSBP1Q04837 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC1.26□□□□□ -2.21
SSBP1Q04837 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.26□□□□□ -2.21
SSBP1Q04837 RNU1-62P-201ENST00000362599 164 ntBASIC1.26□□□□□ -2.21
SSBP1Q04837 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC1.26□□□□□ -2.21
SSBP1Q04837 MIR517C-201ENST00000385103 95 ntBASIC1.26□□□□□ -2.21
SSBP1Q04837 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.26□□□□□ -2.21
SSBP1Q04837 RNU4-74P-201ENST00000411280 161 ntBASIC1.26□□□□□ -2.21
SSBP1Q04837 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.26□□□□□ -2.21
SSBP1Q04837 AL356867.1-201ENST00000429623 299 ntBASIC1.26□□□□□ -2.21
SSBP1Q04837 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.26□□□□□ -2.21
SSBP1Q04837 HMGB1P18-201ENST00000438801 619 ntBASIC1.26□□□□□ -2.21
SSBP1Q04837 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC1.26□□□□□ -2.21
SSBP1Q04837 AC093155.1-201ENST00000440164 826 ntBASIC1.26□□□□□ -2.21
SSBP1Q04837 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC1.26□□□□□ -2.21
SSBP1Q04837 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC1.26□□□□□ -2.21
SSBP1Q04837 CABYRP1-201ENST00000465493 1045 ntBASIC1.26□□□□□ -2.21
SSBP1Q04837 RPL30P9-201ENST00000465586 330 ntBASIC1.26□□□□□ -2.21
SSBP1Q04837 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC1.26□□□□□ -2.21
SSBP1Q04837 MTCYBP35-201ENST00000503630 1137 ntBASIC1.26□□□□□ -2.21
SSBP1Q04837 MRPS17P9-201ENST00000511924 393 ntBASIC1.26□□□□□ -2.21
SSBP1Q04837 RNU6-928P-201ENST00000516876 104 ntBASIC1.26□□□□□ -2.21
SSBP1Q04837 AC022634.1-201ENST00000520765 532 ntBASIC1.26□□□□□ -2.21
SSBP1Q04837 C1DP5-201ENST00000525775 383 ntBASIC1.26□□□□□ -2.21
SSBP1Q04837 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.26□□□□□ -2.21
SSBP1Q04837 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.26□□□□□ -2.21
SSBP1Q04837 AC011260.1-201ENST00000578420 472 ntBASIC1.26□□□□□ -2.21
SSBP1Q04837 AC040174.2-201ENST00000602701 465 ntBASIC1.26□□□□□ -2.21
SSBP1Q04837 AL355297.2-201ENST00000604792 129 ntBASIC1.26□□□□□ -2.21
SSBP1Q04837 AC004908.2-201ENST00000609090 574 ntBASIC1.26□□□□□ -2.21
SSBP1Q04837 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.25□□□□□ -2.21
SSBP1Q04837 AC131280.1-202ENST00000624067 4211 ntBASIC1.25□□□□□ -2.21
SSBP1Q04837 AC111188.2-201ENST00000529697 1387 ntBASIC1.25□□□□□ -2.21
SSBP1Q04837 AC006026.1-201ENST00000444025 1803 ntBASIC1.25□□□□□ -2.21
SSBP1Q04837 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
SSBP1Q04837 RNU6-670P-201ENST00000364312 104 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms