Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 SNORA48.10-201ENST00000516965 160 ntBASIC1.93□□□□□ -2.1
HOXC5Q00444 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.93□□□□□ -2.1
HOXC5Q00444 DEFB108D-201ENST00000527787 222 ntBASIC1.93□□□□□ -2.1
HOXC5Q00444 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC1.93□□□□□ -2.1
HOXC5Q00444 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HOXC5Q00444 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.93□□□□□ -2.1
HOXC5Q00444 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
HOXC5Q00444 AMZ2P1-203ENST00000565833 850 ntBASIC1.93□□□□□ -2.1
HOXC5Q00444 MIR3921-201ENST00000577308 85 ntBASIC1.93□□□□□ -2.1
HOXC5Q00444 SNORD53-201ENST00000579969 78 ntBASIC1.93□□□□□ -2.1
HOXC5Q00444 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC1.93□□□□□ -2.1
HOXC5Q00444 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC1.93□□□□□ -2.1
HOXC5Q00444 AC079791.1-201ENST00000605356 973 ntBASIC1.93□□□□□ -2.1
HOXC5Q00444 VN1R74P-201ENST00000613259 503 ntBASIC1.93□□□□□ -2.1
HOXC5Q00444 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
HOXC5Q00444 AC010378.1-201ENST00000619270 362 ntBASIC1.93□□□□□ -2.1
HOXC5Q00444 CU459211.1-201ENST00000635667 749 ntBASIC1.93□□□□□ -2.1
HOXC5Q00444 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
HOXC5Q00444 AC008669.1-201ENST00000565823 2178 ntBASIC1.93□□□□□ -2.1
HOXC5Q00444 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.93□□□□□ -2.1
HOXC5Q00444 AL022578.1-201ENST00000439330 1433 ntBASIC1.92□□□□□ -2.1
HOXC5Q00444 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
HOXC5Q00444 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.92□□□□□ -2.1
HOXC5Q00444 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
HOXC5Q00444 ANKRD26P2-201ENST00000445530 1710 ntBASIC1.92□□□□□ -2.1
HOXC5Q00444 HSPE1P11-201ENST00000339579 310 ntBASIC1.92□□□□□ -2.1
HOXC5Q00444 OR56A5-201ENST00000340110 738 ntBASIC1.92□□□□□ -2.1
HOXC5Q00444 MIR449A-201ENST00000362113 91 ntBASIC1.92□□□□□ -2.1
HOXC5Q00444 RNU6-839P-201ENST00000363347 108 ntBASIC1.92□□□□□ -2.1
HOXC5Q00444 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HOXC5Q00444 RNU6-878P-201ENST00000384578 110 ntBASIC1.92□□□□□ -2.1
HOXC5Q00444 RNU2-28P-201ENST00000410457 189 ntBASIC1.92□□□□□ -2.1
HOXC5Q00444 SFR1P2-201ENST00000421841 730 ntBASIC1.92□□□□□ -2.1
HOXC5Q00444 AL121882.1-201ENST00000422893 417 ntBASIC1.92□□□□□ -2.1
HOXC5Q00444 SDR42E1P3-201ENST00000438345 502 ntBASIC1.92□□□□□ -2.1
HOXC5Q00444 USP9YP8-201ENST00000441913 500 ntBASIC1.92□□□□□ -2.1
HOXC5Q00444 AC092798.1-201ENST00000458542 409 ntBASIC1.92□□□□□ -2.1
HOXC5Q00444 RPL32P14-201ENST00000463196 378 ntBASIC1.92□□□□□ -2.1
HOXC5Q00444 AC092757.1-201ENST00000467293 467 ntBASIC1.92□□□□□ -2.1
HOXC5Q00444 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC1.92□□□□□ -2.1
HOXC5Q00444 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.92□□□□□ -2.1
HOXC5Q00444 AC008413.1-201ENST00000511864 177 ntBASIC1.92□□□□□ -2.1
HOXC5Q00444 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC1.92□□□□□ -2.1
HOXC5Q00444 RNA5SP364-201ENST00000516938 78 ntBASIC1.92□□□□□ -2.1
HOXC5Q00444 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HOXC5Q00444 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC1.92□□□□□ -2.1
HOXC5Q00444 HMGB1P14-201ENST00000557424 591 ntBASIC1.92□□□□□ -2.1
HOXC5Q00444 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
HOXC5Q00444 AC013553.2-201ENST00000604244 589 ntBASIC1.92□□□□□ -2.1
HOXC5Q00444 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.92□□□□□ -2.1
HOXC5Q00444 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.92□□□□□ -2.1
HOXC5Q00444 AC090132.2-201ENST00000615881 347 ntBASIC1.92□□□□□ -2.1
HOXC5Q00444 AL445493.3-201ENST00000619568 477 ntBASIC1.92□□□□□ -2.1
HOXC5Q00444 MIR6852-201ENST00000621699 66 ntBASIC1.92□□□□□ -2.1
HOXC5Q00444 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.92□□□□□ -2.1
HOXC5Q00444 MIR6873-201ENST00000622788 63 ntBASIC1.92□□□□□ -2.1
HOXC5Q00444 AL512506.2-201ENST00000624472 458 ntBASIC1.92□□□□□ -2.1
HOXC5Q00444 SCARNA15.3-201ENST00000626315 122 ntBASIC1.92□□□□□ -2.1
HOXC5Q00444 SCARNA4.1-201ENST00000628597 123 ntBASIC1.92□□□□□ -2.1
HOXC5Q00444 AL109809.4-201ENST00000603520 2185 ntBASIC1.92□□□□□ -2.1
HOXC5Q00444 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.91□□□□□ -2.1
HOXC5Q00444 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.91□□□□□ -2.1
HOXC5Q00444 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
HOXC5Q00444 AL596028.1-201ENST00000326971 197 ntBASIC1.91□□□□□ -2.1
HOXC5Q00444 RNU1-73P-201ENST00000383971 164 ntBASIC1.91□□□□□ -2.1
HOXC5Q00444 SNORA67.3-201ENST00000384366 140 ntBASIC1.91□□□□□ -2.1
HOXC5Q00444 RNU6-1035P-201ENST00000384477 107 ntBASIC1.91□□□□□ -2.1
HOXC5Q00444 SNORA48.3-201ENST00000391081 134 ntBASIC1.91□□□□□ -2.1
HOXC5Q00444 TMSB4XP8-201ENST00000402089 135 ntBASIC1.91□□□□□ -2.1
HOXC5Q00444 RNU6-575P-201ENST00000411326 105 ntBASIC1.91□□□□□ -2.1
HOXC5Q00444 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.91□□□□□ -2.1
HOXC5Q00444 TMSB4XP6-201ENST00000415187 135 ntBASIC1.91□□□□□ -2.1
HOXC5Q00444 AC099548.1-201ENST00000421443 426 ntBASIC1.91□□□□□ -2.1
HOXC5Q00444 MTCO3P1-205ENST00000422088 832 ntBASIC1.91□□□□□ -2.1
HOXC5Q00444 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.91□□□□□ -2.1
HOXC5Q00444 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.91□□□□□ -2.1
HOXC5Q00444 TMSB4XP1-201ENST00000424567 135 ntBASIC1.91□□□□□ -2.1
HOXC5Q00444 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC1.91□□□□□ -2.1
HOXC5Q00444 AC027124.2-201ENST00000428249 105 ntBASIC1.91□□□□□ -2.1
HOXC5Q00444 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.91□□□□□ -2.1
HOXC5Q00444 AL512844.2-201ENST00000433990 593 ntBASIC1.91□□□□□ -2.1
HOXC5Q00444 AC241584.1-201ENST00000438469 1241 ntBASIC1.91□□□□□ -2.1
HOXC5Q00444 AL714022.1-201ENST00000439897 151 ntBASIC1.91□□□□□ -2.1
HOXC5Q00444 AL445687.1-201ENST00000439946 251 ntBASIC1.91□□□□□ -2.1
HOXC5Q00444 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.91□□□□□ -2.1
HOXC5Q00444 RPS15AP27-201ENST00000449183 343 ntBASIC1.91□□□□□ -2.1
HOXC5Q00444 TPRKBP1-201ENST00000456243 481 ntBASIC1.91□□□□□ -2.1
HOXC5Q00444 AC087588.1-201ENST00000462203 316 ntBASIC1.91□□□□□ -2.1
HOXC5Q00444 AC116337.2-201ENST00000477662 156 ntBASIC1.91□□□□□ -2.1
HOXC5Q00444 AC108734.3-201ENST00000481241 1165 ntBASIC1.91□□□□□ -2.1
HOXC5Q00444 AL049874.1-201ENST00000489560 388 ntBASIC1.91□□□□□ -2.1
HOXC5Q00444 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC1.91□□□□□ -2.1
HOXC5Q00444 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.91□□□□□ -2.1
HOXC5Q00444 AC114322.1-201ENST00000506771 926 ntBASIC1.91□□□□□ -2.1
HOXC5Q00444 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.91□□□□□ -2.1
HOXC5Q00444 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.91□□□□□ -2.1
HOXC5Q00444 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.91□□□□□ -2.1
HOXC5Q00444 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC1.91□□□□□ -2.1
HOXC5Q00444 AC027309.2-201ENST00000520566 192 ntBASIC1.91□□□□□ -2.1
HOXC5Q00444 MIR3117-201ENST00000584034 78 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms