Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 ATP6V0E1P4-201ENST00000427294 242 ntBASIC1.22□□□□□ -2.21
RPS28P62857 AL512661.1-201ENST00000434586 1253 ntBASIC1.22□□□□□ -2.21
RPS28P62857 RSU1P2-202ENST00000437884 485 ntBASIC1.22□□□□□ -2.21
RPS28P62857 HMGN1P2-201ENST00000445197 310 ntBASIC1.22□□□□□ -2.21
RPS28P62857 CYP2C59P-201ENST00000457790 269 ntBASIC1.22□□□□□ -2.21
RPS28P62857 AC005410.1-202ENST00000460347 485 ntBASIC1.22□□□□□ -2.21
RPS28P62857 BX284632.1-201ENST00000478218 541 ntBASIC1.22□□□□□ -2.21
RPS28P62857 AC096576.1-201ENST00000489014 359 ntBASIC1.22□□□□□ -2.21
RPS28P62857 AC109471.1-201ENST00000511631 612 ntBASIC1.22□□□□□ -2.21
RPS28P62857 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC1.22□□□□□ -2.21
RPS28P62857 SNORA44.1-201ENST00000517031 108 ntBASIC1.22□□□□□ -2.21
RPS28P62857 AC023632.4-201ENST00000517783 191 ntBASIC1.22□□□□□ -2.21
RPS28P62857 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC1.22□□□□□ -2.21
RPS28P62857 AP003730.1-201ENST00000524605 285 ntBASIC1.22□□□□□ -2.21
RPS28P62857 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.22□□□□□ -2.21
RPS28P62857 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC1.22□□□□□ -2.21
RPS28P62857 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC1.22□□□□□ -2.21
RPS28P62857 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.22□□□□□ -2.21
RPS28P62857 AC007225.2-201ENST00000562529 256 ntBASIC1.22□□□□□ -2.21
RPS28P62857 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC1.22□□□□□ -2.21
RPS28P62857 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC1.22□□□□□ -2.21
RPS28P62857 AC026271.5-201ENST00000577873 130 ntBASIC1.22□□□□□ -2.21
RPS28P62857 MIR1269B-201ENST00000580405 75 ntBASIC1.22□□□□□ -2.21
RPS28P62857 MIR4276-201ENST00000584832 70 ntBASIC1.22□□□□□ -2.21
RPS28P62857 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.22□□□□□ -2.21
RPS28P62857 MTCYBP22-201ENST00000603788 447 ntBASIC1.22□□□□□ -2.21
RPS28P62857 SUMO2P15-201ENST00000604285 278 ntBASIC1.22□□□□□ -2.21
RPS28P62857 AL109618.2-201ENST00000605527 211 ntBASIC1.22□□□□□ -2.21
RPS28P62857 AC103810.8-201ENST00000607347 118 ntBASIC1.22□□□□□ -2.21
RPS28P62857 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.22□□□□□ -2.21
RPS28P62857 uc_338.14-201ENST00000613162 166 ntBASIC1.22□□□□□ -2.21
RPS28P62857 AC090510.2-201ENST00000617465 629 ntBASIC1.22□□□□□ -2.21
RPS28P62857 AC091304.6-201ENST00000619761 202 ntBASIC1.22□□□□□ -2.21
RPS28P62857 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC1.22□□□□□ -2.21
RPS28P62857 AC092192.1-201ENST00000633154 1018 ntBASIC1.22□□□□□ -2.21
RPS28P62857 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.22□□□□□ -2.21
RPS28P62857 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.22□□□□□ -2.21
RPS28P62857 MTCO1P11-201ENST00000429111 1528 ntBASIC1.21□□□□□ -2.22
RPS28P62857 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.21□□□□□ -2.22
RPS28P62857 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.21□□□□□ -2.22
RPS28P62857 RN7SKP187-201ENST00000365536 330 ntBASIC1.21□□□□□ -2.22
RPS28P62857 AL033519.2-201ENST00000403958 392 ntBASIC1.21□□□□□ -2.22
RPS28P62857 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC1.21□□□□□ -2.22
RPS28P62857 RN7SKP273-201ENST00000411392 314 ntBASIC1.21□□□□□ -2.22
RPS28P62857 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.21□□□□□ -2.22
RPS28P62857 AL449283.1-202ENST00000418249 604 ntBASIC1.21□□□□□ -2.22
RPS28P62857 AC005005.2-201ENST00000420779 380 ntBASIC1.21□□□□□ -2.22
RPS28P62857 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
RPS28P62857 AL160275.3-201ENST00000423876 471 ntBASIC1.21□□□□□ -2.22
RPS28P62857 RPEP3-201ENST00000425462 676 ntBASIC1.21□□□□□ -2.22
RPS28P62857 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC1.21□□□□□ -2.22
RPS28P62857 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
RPS28P62857 AC118469.1-201ENST00000442943 488 ntBASIC1.21□□□□□ -2.22
RPS28P62857 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC1.21□□□□□ -2.22
RPS28P62857 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC1.21□□□□□ -2.22
RPS28P62857 RN7SL168P-201ENST00000463821 279 ntBASIC1.21□□□□□ -2.22
RPS28P62857 AC006445.1-201ENST00000491925 405 ntBASIC1.21□□□□□ -2.22
RPS28P62857 AK3P4-201ENST00000504283 583 ntBASIC1.21□□□□□ -2.22
RPS28P62857 AC110794.1-201ENST00000505816 425 ntBASIC1.21□□□□□ -2.22
RPS28P62857 AC104090.1-201ENST00000506341 1171 ntBASIC1.21□□□□□ -2.22
RPS28P62857 SNORA74D-201ENST00000516404 141 ntBASIC1.21□□□□□ -2.22
RPS28P62857 RNA5SP92-201ENST00000516437 110 ntBASIC1.21□□□□□ -2.22
RPS28P62857 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC1.21□□□□□ -2.22
RPS28P62857 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
RPS28P62857 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC1.21□□□□□ -2.22
RPS28P62857 AC023824.3-201ENST00000569003 562 ntBASIC1.21□□□□□ -2.22
RPS28P62857 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC1.21□□□□□ -2.22
RPS28P62857 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.21□□□□□ -2.22
RPS28P62857 RPP40P2-201ENST00000603596 712 ntBASIC1.21□□□□□ -2.22
RPS28P62857 AC104763.2-201ENST00000604179 382 ntBASIC1.21□□□□□ -2.22
RPS28P62857 AC136601.2-201ENST00000604356 474 ntBASIC1.21□□□□□ -2.22
RPS28P62857 AL159972.1-201ENST00000625150 448 ntBASIC1.21□□□□□ -2.22
RPS28P62857 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.21□□□□□ -2.22
RPS28P62857 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
RPS28P62857 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC1.2□□□□□ -2.22
RPS28P62857 SNORA48.3-201ENST00000391081 134 ntBASIC1.2□□□□□ -2.22
RPS28P62857 AL356131.1-201ENST00000405826 414 ntBASIC1.2□□□□□ -2.22
RPS28P62857 NDUFS5P4-201ENST00000412983 318 ntBASIC1.2□□□□□ -2.22
RPS28P62857 HMGB1P11-201ENST00000413899 637 ntBASIC1.2□□□□□ -2.22
RPS28P62857 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.2□□□□□ -2.22
RPS28P62857 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC1.2□□□□□ -2.22
RPS28P62857 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC1.2□□□□□ -2.22
RPS28P62857 MTND2P29-201ENST00000438595 412 ntBASIC1.2□□□□□ -2.22
RPS28P62857 AC122718.1-201ENST00000439448 744 ntBASIC1.2□□□□□ -2.22
RPS28P62857 AL513533.1-201ENST00000453728 415 ntBASIC1.2□□□□□ -2.22
RPS28P62857 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC1.2□□□□□ -2.22
RPS28P62857 RPL22P13-201ENST00000493291 347 ntBASIC1.2□□□□□ -2.22
RPS28P62857 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC1.2□□□□□ -2.22
RPS28P62857 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.2□□□□□ -2.22
RPS28P62857 RNU6-840P-201ENST00000517275 65 ntBASIC1.2□□□□□ -2.22
RPS28P62857 IGHVII-62-1-201ENST00000519283 235 ntBASIC1.2□□□□□ -2.22
RPS28P62857 AC034114.1-201ENST00000520293 285 ntBASIC1.2□□□□□ -2.22
RPS28P62857 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.2□□□□□ -2.22
RPS28P62857 AC124293.1-201ENST00000530034 493 ntBASIC1.2□□□□□ -2.22
RPS28P62857 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
RPS28P62857 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC1.2□□□□□ -2.22
RPS28P62857 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.2□□□□□ -2.22
RPS28P62857 AC022254.1-201ENST00000567857 235 ntBASIC1.2□□□□□ -2.22
RPS28P62857 MIR3167-201ENST00000579623 85 ntBASIC1.2□□□□□ -2.22
RPS28P62857 MIR4646-201ENST00000580775 63 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms