Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 DUXAP1-201ENST00000556632 463 ntBASIC3.01□□□□□ -1.93
SRP54P61011 AMZ2P1-203ENST00000565833 850 ntBASIC3.01□□□□□ -1.93
SRP54P61011 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.01□□□□□ -1.93
SRP54P61011 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.01□□□□□ -1.93
SRP54P61011 NUTF2P8-201ENST00000604593 363 ntBASIC3.01□□□□□ -1.93
SRP54P61011 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SRP54P61011 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.01□□□□□ -1.93
SRP54P61011 AC009039.2-201ENST00000624524 529 ntBASIC3.01□□□□□ -1.93
SRP54P61011 SCARNA15.3-201ENST00000626315 122 ntBASIC3.01□□□□□ -1.93
SRP54P61011 SCARNA4.1-201ENST00000628597 123 ntBASIC3.01□□□□□ -1.93
SRP54P61011 AL137790.1-201ENST00000634283 177 ntBASIC3.01□□□□□ -1.93
SRP54P61011 OR5H6-203ENST00000642105 978 ntBASIC3.01□□□□□ -1.93
SRP54P61011 OR4G2P-202ENST00000641004 1759 ntBASIC3.01□□□□□ -1.93
SRP54P61011 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.01□□□□□ -1.93
SRP54P61011 AC009902.3-201ENST00000606235 2172 ntBASIC3.01□□□□□ -1.93
SRP54P61011 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
SRP54P61011 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.01□□□□□ -1.93
SRP54P61011 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3□□□□□ -1.93
SRP54P61011 FAM133CP-201ENST00000332869 704 ntBASIC3□□□□□ -1.93
SRP54P61011 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3□□□□□ -1.93
SRP54P61011 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3□□□□□ -1.93
SRP54P61011 AL672167.1-206ENST00000356293 943 ntBASIC3□□□□□ -1.93
SRP54P61011 RNU6-1027P-201ENST00000383998 107 ntBASIC3□□□□□ -1.93
SRP54P61011 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3□□□□□ -1.93
SRP54P61011 AL590084.2-201ENST00000401481 382 ntBASIC3□□□□□ -1.93
SRP54P61011 HIST1H2APS3-201ENST00000403259 134 ntBASIC3□□□□□ -1.93
SRP54P61011 MTCO1P17-201ENST00000411522 491 ntBASIC3□□□□□ -1.93
SRP54P61011 SPA17P1-201ENST00000416656 452 ntBASIC3□□□□□ -1.93
SRP54P61011 AC109583.1-201ENST00000432156 268 ntBASIC3□□□□□ -1.93
SRP54P61011 AP000542.1-201ENST00000448473 371 ntBASIC3□□□□□ -1.93
SRP54P61011 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3□□□□□ -1.93
SRP54P61011 OR6K1P-201ENST00000456766 971 ntBASIC3□□□□□ -1.93
SRP54P61011 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3□□□□□ -1.93
SRP54P61011 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
SRP54P61011 RNU6-1282P-201ENST00000516735 96 ntBASIC3□□□□□ -1.93
SRP54P61011 MTND2P32-201ENST00000521584 1038 ntBASIC3□□□□□ -1.93
SRP54P61011 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3□□□□□ -1.93
SRP54P61011 UBTFL10-201ENST00000528532 562 ntBASIC3□□□□□ -1.93
SRP54P61011 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3□□□□□ -1.93
SRP54P61011 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC3□□□□□ -1.93
SRP54P61011 HMGB1P6-201ENST00000569046 646 ntBASIC3□□□□□ -1.93
SRP54P61011 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3□□□□□ -1.93
SRP54P61011 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3□□□□□ -1.93
SRP54P61011 AL450336.1-201ENST00000605180 586 ntBASIC3□□□□□ -1.93
SRP54P61011 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3□□□□□ -1.93
SRP54P61011 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3□□□□□ -1.93
SRP54P61011 AC019226.1-201ENST00000625666 515 ntBASIC3□□□□□ -1.93
SRP54P61011 PCMTD1P7-201ENST00000634506 357 ntBASIC3□□□□□ -1.93
SRP54P61011 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3□□□□□ -1.93
SRP54P61011 AL365361.1-201ENST00000566942 3481 ntBASIC3□□□□□ -1.93
SRP54P61011 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3□□□□□ -1.93
SRP54P61011 AC010680.1-201ENST00000590024 3590 ntBASIC3□□□□□ -1.93
SRP54P61011 AC092435.3-201ENST00000565538 3654 ntBASIC2.99□□□□□ -1.93
SRP54P61011 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SRP54P61011 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.99□□□□□ -1.93
SRP54P61011 RNU6-223P-201ENST00000362830 107 ntBASIC2.99□□□□□ -1.93
SRP54P61011 RNU6-853P-201ENST00000364306 107 ntBASIC2.99□□□□□ -1.93
SRP54P61011 RNU6-7-201ENST00000364784 107 ntBASIC2.99□□□□□ -1.93
SRP54P61011 SNORA23-201ENST00000365128 182 ntBASIC2.99□□□□□ -1.93
SRP54P61011 RNU6-8-201ENST00000365467 107 ntBASIC2.99□□□□□ -1.93
SRP54P61011 MIR513B-201ENST00000385136 84 ntBASIC2.99□□□□□ -1.93
SRP54P61011 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SRP54P61011 PIGPP2-201ENST00000411569 458 ntBASIC2.99□□□□□ -1.93
SRP54P61011 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.99□□□□□ -1.93
SRP54P61011 ZNF736P11Y-201ENST00000442535 1213 ntBASIC2.99□□□□□ -1.93
SRP54P61011 ZNF736P12Y-201ENST00000443152 1243 ntBASIC2.99□□□□□ -1.93
SRP54P61011 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.99□□□□□ -1.93
SRP54P61011 SNORD11.1-201ENST00000459482 85 ntBASIC2.99□□□□□ -1.93
SRP54P61011 AC147055.4-201ENST00000504399 745 ntBASIC2.99□□□□□ -1.93
SRP54P61011 AC097462.2-201ENST00000504623 481 ntBASIC2.99□□□□□ -1.93
SRP54P61011 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.99□□□□□ -1.93
SRP54P61011 TTC39CP1-201ENST00000512513 755 ntBASIC2.99□□□□□ -1.93
SRP54P61011 RNU5A-4P-201ENST00000516588 111 ntBASIC2.99□□□□□ -1.93
SRP54P61011 RNU6-56P-201ENST00000516986 93 ntBASIC2.99□□□□□ -1.93
SRP54P61011 SCARNA20.6-201ENST00000517251 106 ntBASIC2.99□□□□□ -1.93
SRP54P61011 RNU6-840P-201ENST00000517275 65 ntBASIC2.99□□□□□ -1.93
SRP54P61011 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.99□□□□□ -1.93
SRP54P61011 AC023050.2-201ENST00000544968 387 ntBASIC2.99□□□□□ -1.93
SRP54P61011 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.99□□□□□ -1.93
SRP54P61011 AL355836.1-201ENST00000555951 870 ntBASIC2.99□□□□□ -1.93
SRP54P61011 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.99□□□□□ -1.93
SRP54P61011 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.99□□□□□ -1.93
SRP54P61011 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.99□□□□□ -1.93
SRP54P61011 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.99□□□□□ -1.93
SRP54P61011 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
SRP54P61011 AL138713.1-201ENST00000624026 2130 ntBASIC2.99□□□□□ -1.93
SRP54P61011 AC093831.2-201ENST00000624393 3427 ntBASIC2.98□□□□□ -1.93
SRP54P61011 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SRP54P61011 AL049641.1-201ENST00000441055 1948 ntBASIC2.98□□□□□ -1.93
SRP54P61011 AC007785.2-201ENST00000598627 1916 ntBASIC2.98□□□□□ -1.93
SRP54P61011 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
SRP54P61011 RNU6-931P-201ENST00000363850 107 ntBASIC2.98□□□□□ -1.93
SRP54P61011 SNORA80A-201ENST00000363922 136 ntBASIC2.98□□□□□ -1.93
SRP54P61011 RNA5SP139-201ENST00000364340 117 ntBASIC2.98□□□□□ -1.93
SRP54P61011 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SRP54P61011 RNU6-1035P-201ENST00000384477 107 ntBASIC2.98□□□□□ -1.93
SRP54P61011 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.98□□□□□ -1.93
SRP54P61011 Z85995.1-201ENST00000415547 335 ntBASIC2.98□□□□□ -1.93
SRP54P61011 MTCO2P21-201ENST00000419780 677 ntBASIC2.98□□□□□ -1.93
SRP54P61011 MTND1P32-201ENST00000433043 938 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms