Protein–RNA interactions for Protein: P59942

MCCD1, Mitochondrial coiled-coil domain protein 1, humanhuman

Predicted RBP Predictions only

Length 119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCCD1P59942 MIR153-1-201ENST00000384914 90 ntBASIC5.62□□□□□ -1.51
MCCD1P59942 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
MCCD1P59942 RNU6-121P-201ENST00000410525 99 ntBASIC5.62□□□□□ -1.51
MCCD1P59942 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC5.62□□□□□ -1.51
MCCD1P59942 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.62□□□□□ -1.51
MCCD1P59942 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.62□□□□□ -1.51
MCCD1P59942 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.62□□□□□ -1.51
MCCD1P59942 AL159987.2-201ENST00000432754 307 ntBASIC5.62□□□□□ -1.51
MCCD1P59942 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.62□□□□□ -1.51
MCCD1P59942 AL359073.1-201ENST00000448036 403 ntBASIC5.62□□□□□ -1.51
MCCD1P59942 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.62□□□□□ -1.51
MCCD1P59942 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.62□□□□□ -1.51
MCCD1P59942 AC024940.3-201ENST00000538551 316 ntBASIC5.62□□□□□ -1.51
MCCD1P59942 AC011447.4-201ENST00000587562 111 ntBASIC5.62□□□□□ -1.51
MCCD1P59942 DLEU2_2.2-201ENST00000615474 90 ntBASIC5.62□□□□□ -1.51
MCCD1P59942 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
MCCD1P59942 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
MCCD1P59942 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
MCCD1P59942 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
MCCD1P59942 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.62□□□□□ -1.51
MCCD1P59942 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
MCCD1P59942 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
MCCD1P59942 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
MCCD1P59942 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
MCCD1P59942 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
MCCD1P59942 SNORA17.1-201ENST00000362945 126 ntBASIC5.61□□□□□ -1.51
MCCD1P59942 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.61□□□□□ -1.51
MCCD1P59942 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
MCCD1P59942 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.61□□□□□ -1.51
MCCD1P59942 U3.32-201ENST00000408116 212 ntBASIC5.61□□□□□ -1.51
MCCD1P59942 RNU2-25P-201ENST00000411041 191 ntBASIC5.61□□□□□ -1.51
MCCD1P59942 AL445487.1-201ENST00000415694 1580 ntBASIC5.61□□□□□ -1.51
MCCD1P59942 AC092573.2-201ENST00000434546 243 ntBASIC5.61□□□□□ -1.51
MCCD1P59942 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
MCCD1P59942 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.61□□□□□ -1.51
MCCD1P59942 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC5.61□□□□□ -1.51
MCCD1P59942 AL389915.2-201ENST00000454576 441 ntBASIC5.61□□□□□ -1.51
MCCD1P59942 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC5.61□□□□□ -1.51
MCCD1P59942 AC022493.1-201ENST00000492984 337 ntBASIC5.61□□□□□ -1.51
MCCD1P59942 SNRPCP2-201ENST00000504370 475 ntBASIC5.61□□□□□ -1.51
MCCD1P59942 RNU6-789P-201ENST00000517105 102 ntBASIC5.61□□□□□ -1.51
MCCD1P59942 SNORA81.3-201ENST00000517283 198 ntBASIC5.61□□□□□ -1.51
MCCD1P59942 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
MCCD1P59942 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC5.61□□□□□ -1.51
MCCD1P59942 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
MCCD1P59942 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.61□□□□□ -1.51
MCCD1P59942 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
MCCD1P59942 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC5.61□□□□□ -1.51
MCCD1P59942 AC109309.2-201ENST00000612597 332 ntBASIC5.61□□□□□ -1.51
MCCD1P59942 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.61□□□□□ -1.51
MCCD1P59942 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC5.61□□□□□ -1.51
MCCD1P59942 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.61□□□□□ -1.51
MCCD1P59942 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC5.61□□□□□ -1.51
MCCD1P59942 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
MCCD1P59942 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
MCCD1P59942 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
MCCD1P59942 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC5.61□□□□□ -1.51
MCCD1P59942 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
MCCD1P59942 ZNF299P-201ENST00000406845 1804 ntBASIC5.6□□□□□ -1.51
MCCD1P59942 PABPC1P6-201ENST00000445594 1829 ntBASIC5.6□□□□□ -1.51
MCCD1P59942 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
MCCD1P59942 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
MCCD1P59942 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
MCCD1P59942 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
MCCD1P59942 Y_RNA.183-201ENST00000363882 113 ntBASIC5.6□□□□□ -1.51
MCCD1P59942 Y_RNA.462-201ENST00000384268 102 ntBASIC5.6□□□□□ -1.51
MCCD1P59942 MIR215-201ENST00000384858 110 ntBASIC5.6□□□□□ -1.51
MCCD1P59942 AL591034.2-201ENST00000402839 359 ntBASIC5.6□□□□□ -1.51
MCCD1P59942 SNORA11.3-201ENST00000408471 128 ntBASIC5.6□□□□□ -1.51
MCCD1P59942 MIR548H3-201ENST00000408771 118 ntBASIC5.6□□□□□ -1.51
MCCD1P59942 RNU2-33P-201ENST00000410344 192 ntBASIC5.6□□□□□ -1.51
MCCD1P59942 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.6□□□□□ -1.51
MCCD1P59942 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC5.6□□□□□ -1.51
MCCD1P59942 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.6□□□□□ -1.51
MCCD1P59942 HSPD1P21-201ENST00000436541 245 ntBASIC5.6□□□□□ -1.51
MCCD1P59942 RPEP5-201ENST00000441137 268 ntBASIC5.6□□□□□ -1.51
MCCD1P59942 H2AFZP5-201ENST00000446960 382 ntBASIC5.6□□□□□ -1.51
MCCD1P59942 AC073587.1-201ENST00000447093 876 ntBASIC5.6□□□□□ -1.51
MCCD1P59942 RPL7P5-201ENST00000471472 736 ntBASIC5.6□□□□□ -1.51
MCCD1P59942 BX284632.1-201ENST00000478218 541 ntBASIC5.6□□□□□ -1.51
MCCD1P59942 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC5.6□□□□□ -1.51
MCCD1P59942 MIR892C-201ENST00000516410 77 ntBASIC5.6□□□□□ -1.51
MCCD1P59942 RNU6-406P-201ENST00000516470 107 ntBASIC5.6□□□□□ -1.51
MCCD1P59942 RNA5SP471-201ENST00000516971 106 ntBASIC5.6□□□□□ -1.51
MCCD1P59942 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC5.6□□□□□ -1.51
MCCD1P59942 AC109329.1-201ENST00000518744 317 ntBASIC5.6□□□□□ -1.51
MCCD1P59942 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.6□□□□□ -1.51
MCCD1P59942 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5.6□□□□□ -1.51
MCCD1P59942 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC5.6□□□□□ -1.51
MCCD1P59942 AC233702.9-201ENST00000581528 203 ntBASIC5.6□□□□□ -1.51
MCCD1P59942 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.6□□□□□ -1.51
MCCD1P59942 AC034102.8-201ENST00000615146 484 ntBASIC5.6□□□□□ -1.51
MCCD1P59942 SNORA11.6-201ENST00000619030 128 ntBASIC5.6□□□□□ -1.51
MCCD1P59942 MIR6886-201ENST00000619864 61 ntBASIC5.6□□□□□ -1.51
MCCD1P59942 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.6□□□□□ -1.51
MCCD1P59942 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
MCCD1P59942 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
MCCD1P59942 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
MCCD1P59942 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
MCCD1P59942 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms