Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.66□□□□□ -1.82
NR1H2P55055 AC005951.1-201ENST00000576706 485 ntBASIC3.66□□□□□ -1.82
NR1H2P55055 MIR3913-1-201ENST00000577744 102 ntBASIC3.66□□□□□ -1.82
NR1H2P55055 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.66□□□□□ -1.82
NR1H2P55055 AC002545.1-201ENST00000592511 181 ntBASIC3.66□□□□□ -1.82
NR1H2P55055 AC024220.1-201ENST00000603675 484 ntBASIC3.66□□□□□ -1.82
NR1H2P55055 AC108747.1-201ENST00000609508 535 ntBASIC3.66□□□□□ -1.82
NR1H2P55055 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.66□□□□□ -1.82
NR1H2P55055 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.66□□□□□ -1.82
NR1H2P55055 AC027309.3-201ENST00000623419 351 ntBASIC3.66□□□□□ -1.82
NR1H2P55055 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NR1H2P55055 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NR1H2P55055 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NR1H2P55055 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.66□□□□□ -1.82
NR1H2P55055 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
NR1H2P55055 RLIMP1-201ENST00000339626 1680 ntBASIC3.65□□□□□ -1.82
NR1H2P55055 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.65□□□□□ -1.82
NR1H2P55055 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
NR1H2P55055 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
NR1H2P55055 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.65□□□□□ -1.83
NR1H2P55055 U8.3-201ENST00000363321 132 ntBASIC3.65□□□□□ -1.83
NR1H2P55055 RNY3P13-201ENST00000365542 102 ntBASIC3.65□□□□□ -1.83
NR1H2P55055 RPS3AP36-201ENST00000398190 775 ntBASIC3.65□□□□□ -1.83
NR1H2P55055 RNU6-1077P-201ENST00000410506 102 ntBASIC3.65□□□□□ -1.83
NR1H2P55055 RNU2-66P-201ENST00000410650 161 ntBASIC3.65□□□□□ -1.83
NR1H2P55055 RPS15AP6-201ENST00000420703 385 ntBASIC3.65□□□□□ -1.83
NR1H2P55055 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.65□□□□□ -1.83
NR1H2P55055 AC073614.1-201ENST00000438690 650 ntBASIC3.65□□□□□ -1.83
NR1H2P55055 CBWD4P-201ENST00000445695 655 ntBASIC3.65□□□□□ -1.83
NR1H2P55055 VN1R34P-201ENST00000447387 883 ntBASIC3.65□□□□□ -1.83
NR1H2P55055 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.65□□□□□ -1.83
NR1H2P55055 GAPDHP17-201ENST00000449858 1001 ntBASIC3.65□□□□□ -1.83
NR1H2P55055 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.65□□□□□ -1.83
NR1H2P55055 AC006539.3-201ENST00000454258 129 ntBASIC3.65□□□□□ -1.83
NR1H2P55055 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.65□□□□□ -1.83
NR1H2P55055 RNU6-420P-201ENST00000458780 107 ntBASIC3.65□□□□□ -1.83
NR1H2P55055 SNORD97-201ENST00000459187 142 ntBASIC3.65□□□□□ -1.83
NR1H2P55055 snoU13.22-201ENST00000459428 104 ntBASIC3.65□□□□□ -1.83
NR1H2P55055 RPL38P1-201ENST00000460914 211 ntBASIC3.65□□□□□ -1.83
NR1H2P55055 AC010631.1-201ENST00000474150 156 ntBASIC3.65□□□□□ -1.83
NR1H2P55055 AC020893.1-201ENST00000502452 580 ntBASIC3.65□□□□□ -1.83
NR1H2P55055 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NR1H2P55055 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.65□□□□□ -1.83
NR1H2P55055 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.65□□□□□ -1.83
NR1H2P55055 Y_RNA.672-201ENST00000516289 104 ntBASIC3.65□□□□□ -1.83
NR1H2P55055 RNU2-10P-201ENST00000516375 211 ntBASIC3.65□□□□□ -1.83
NR1H2P55055 RNU6-1256P-201ENST00000516539 103 ntBASIC3.65□□□□□ -1.83
NR1H2P55055 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.65□□□□□ -1.83
NR1H2P55055 MIR3118-1-201ENST00000581787 76 ntBASIC3.65□□□□□ -1.83
NR1H2P55055 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.65□□□□□ -1.83
NR1H2P55055 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.65□□□□□ -1.83
NR1H2P55055 AC068790.6-201ENST00000602558 258 ntBASIC3.65□□□□□ -1.83
NR1H2P55055 NDUFA8P1-201ENST00000605525 367 ntBASIC3.65□□□□□ -1.83
NR1H2P55055 AC005332.10-201ENST00000612725 619 ntBASIC3.65□□□□□ -1.83
NR1H2P55055 AC015540.1-201ENST00000615828 501 ntBASIC3.65□□□□□ -1.83
NR1H2P55055 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NR1H2P55055 AC092628.2-201ENST00000622492 339 ntBASIC3.65□□□□□ -1.83
NR1H2P55055 AC110801.1-201ENST00000623590 212 ntBASIC3.65□□□□□ -1.83
NR1H2P55055 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.65□□□□□ -1.83
NR1H2P55055 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.65□□□□□ -1.83
NR1H2P55055 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
NR1H2P55055 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NR1H2P55055 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.65□□□□□ -1.83
NR1H2P55055 PWAR6-201ENST00000552334 4618 ntBASIC3.64□□□□□ -1.83
NR1H2P55055 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NR1H2P55055 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
NR1H2P55055 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NR1H2P55055 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NR1H2P55055 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.64□□□□□ -1.83
NR1H2P55055 AC092447.7-201ENST00000422212 1621 ntBASIC3.64□□□□□ -1.83
NR1H2P55055 GNG5P1-201ENST00000255500 204 ntBASIC3.64□□□□□ -1.83
NR1H2P55055 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NR1H2P55055 RNA5SP387-201ENST00000364226 106 ntBASIC3.64□□□□□ -1.83
NR1H2P55055 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NR1H2P55055 U1.1-201ENST00000384101 164 ntBASIC3.64□□□□□ -1.83
NR1H2P55055 AL359634.1-202ENST00000404721 284 ntBASIC3.64□□□□□ -1.83
NR1H2P55055 RNU6-195P-201ENST00000411352 109 ntBASIC3.64□□□□□ -1.83
NR1H2P55055 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.64□□□□□ -1.83
NR1H2P55055 C1DP2-201ENST00000418167 426 ntBASIC3.64□□□□□ -1.83
NR1H2P55055 AC019097.1-201ENST00000424783 735 ntBASIC3.64□□□□□ -1.83
NR1H2P55055 GOT2P5-201ENST00000433995 546 ntBASIC3.64□□□□□ -1.83
NR1H2P55055 AC119618.1-201ENST00000434191 222 ntBASIC3.64□□□□□ -1.83
NR1H2P55055 HMGB1P37-201ENST00000439613 609 ntBASIC3.64□□□□□ -1.83
NR1H2P55055 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
NR1H2P55055 AL358232.1-201ENST00000448030 501 ntBASIC3.64□□□□□ -1.83
NR1H2P55055 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.64□□□□□ -1.83
NR1H2P55055 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.64□□□□□ -1.83
NR1H2P55055 VN1R105P-201ENST00000486595 910 ntBASIC3.64□□□□□ -1.83
NR1H2P55055 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC3.64□□□□□ -1.83
NR1H2P55055 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.64□□□□□ -1.83
NR1H2P55055 AC107934.1-201ENST00000522215 217 ntBASIC3.64□□□□□ -1.83
NR1H2P55055 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.64□□□□□ -1.83
NR1H2P55055 AC004024.1-201ENST00000549244 247 ntBASIC3.64□□□□□ -1.83
NR1H2P55055 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.64□□□□□ -1.83
NR1H2P55055 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.64□□□□□ -1.83
NR1H2P55055 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.64□□□□□ -1.83
NR1H2P55055 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.64□□□□□ -1.83
NR1H2P55055 AL136363.2-201ENST00000604173 851 ntBASIC3.64□□□□□ -1.83
NR1H2P55055 AC109347.2-201ENST00000610220 349 ntBASIC3.64□□□□□ -1.83
NR1H2P55055 AC013562.2-201ENST00000611632 603 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms