Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 HMGB1P14-201ENST00000557424 591 ntBASIC6.65□□□□□ -1.34
ATN1P54259 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC6.65□□□□□ -1.34
ATN1P54259 CU639417.4-201ENST00000623928 207 ntBASIC6.65□□□□□ -1.34
ATN1P54259 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
ATN1P54259 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
ATN1P54259 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
ATN1P54259 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.65□□□□□ -1.35
ATN1P54259 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.65□□□□□ -1.35
ATN1P54259 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.65□□□□□ -1.35
ATN1P54259 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.65□□□□□ -1.35
ATN1P54259 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.65□□□□□ -1.35
ATN1P54259 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.65□□□□□ -1.35
ATN1P54259 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
ATN1P54259 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.65□□□□□ -1.35
ATN1P54259 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
ATN1P54259 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.65□□□□□ -1.35
ATN1P54259 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
ATN1P54259 AC138915.1-201ENST00000565427 1685 ntBASIC6.65□□□□□ -1.35
ATN1P54259 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
ATN1P54259 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.64□□□□□ -1.35
ATN1P54259 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
ATN1P54259 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.64□□□□□ -1.35
ATN1P54259 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.64□□□□□ -1.35
ATN1P54259 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
ATN1P54259 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
ATN1P54259 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.64□□□□□ -1.35
ATN1P54259 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
ATN1P54259 RNU105B-201ENST00000364478 208 ntBASIC6.64□□□□□ -1.35
ATN1P54259 SNORD14B-201ENST00000364533 90 ntBASIC6.64□□□□□ -1.35
ATN1P54259 Y_RNA.281-201ENST00000364774 94 ntBASIC6.64□□□□□ -1.35
ATN1P54259 RNU6-336P-201ENST00000364891 107 ntBASIC6.64□□□□□ -1.35
ATN1P54259 RNU6-1296P-201ENST00000383879 107 ntBASIC6.64□□□□□ -1.35
ATN1P54259 SNORA20B-201ENST00000384220 132 ntBASIC6.64□□□□□ -1.35
ATN1P54259 CYB5AP4-201ENST00000396692 399 ntBASIC6.64□□□□□ -1.35
ATN1P54259 AL133388.1-201ENST00000404509 287 ntBASIC6.64□□□□□ -1.35
ATN1P54259 AC016739.1-201ENST00000405359 345 ntBASIC6.64□□□□□ -1.35
ATN1P54259 RNA5SP225-201ENST00000410874 135 ntBASIC6.64□□□□□ -1.35
ATN1P54259 RPL31P2-201ENST00000413849 377 ntBASIC6.64□□□□□ -1.35
ATN1P54259 RPL21P66-201ENST00000426566 466 ntBASIC6.64□□□□□ -1.35
ATN1P54259 AC004386.2-201ENST00000441858 148 ntBASIC6.64□□□□□ -1.35
ATN1P54259 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC6.64□□□□□ -1.35
ATN1P54259 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC6.64□□□□□ -1.35
ATN1P54259 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC6.64□□□□□ -1.35
ATN1P54259 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC6.64□□□□□ -1.35
ATN1P54259 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC6.64□□□□□ -1.35
ATN1P54259 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC6.64□□□□□ -1.35
ATN1P54259 AL357075.2-201ENST00000614906 189 ntBASIC6.64□□□□□ -1.35
ATN1P54259 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
ATN1P54259 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
ATN1P54259 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
ATN1P54259 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.64□□□□□ -1.35
ATN1P54259 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
ATN1P54259 MAPK10-261ENST00000641050 3109 ntBASIC6.64□□□□□ -1.35
ATN1P54259 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
ATN1P54259 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
ATN1P54259 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
ATN1P54259 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC6.64□□□□□ -1.35
ATN1P54259 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
ATN1P54259 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
ATN1P54259 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
ATN1P54259 SAGE4P-201ENST00000442271 3381 ntBASIC6.63□□□□□ -1.35
ATN1P54259 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
ATN1P54259 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
ATN1P54259 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
ATN1P54259 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
ATN1P54259 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.63□□□□□ -1.35
ATN1P54259 RNU6-728P-201ENST00000365375 104 ntBASIC6.63□□□□□ -1.35
ATN1P54259 MIR488-201ENST00000365739 83 ntBASIC6.63□□□□□ -1.35
ATN1P54259 RNU6-729P-201ENST00000384399 107 ntBASIC6.63□□□□□ -1.35
ATN1P54259 Y_RNA.572-201ENST00000384757 98 ntBASIC6.63□□□□□ -1.35
ATN1P54259 AC013442.1-201ENST00000397347 228 ntBASIC6.63□□□□□ -1.35
ATN1P54259 Y_RNA.617-201ENST00000410920 90 ntBASIC6.63□□□□□ -1.35
ATN1P54259 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.63□□□□□ -1.35
ATN1P54259 AC245047.8-201ENST00000456455 284 ntBASIC6.63□□□□□ -1.35
ATN1P54259 RN7SL860P-201ENST00000473738 223 ntBASIC6.63□□□□□ -1.35
ATN1P54259 AF186996.7-201ENST00000492781 209 ntBASIC6.63□□□□□ -1.35
ATN1P54259 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.63□□□□□ -1.35
ATN1P54259 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.63□□□□□ -1.35
ATN1P54259 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.63□□□□□ -1.35
ATN1P54259 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.63□□□□□ -1.35
ATN1P54259 AC024255.1-201ENST00000614376 102 ntBASIC6.63□□□□□ -1.35
ATN1P54259 AL450472.3-201ENST00000615578 367 ntBASIC6.63□□□□□ -1.35
ATN1P54259 MIR6864-201ENST00000617935 70 ntBASIC6.63□□□□□ -1.35
ATN1P54259 AP001541.1-201ENST00000623322 1904 ntBASIC6.63□□□□□ -1.35
ATN1P54259 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.63□□□□□ -1.35
ATN1P54259 MAPK10-287ENST00000641217 3037 ntBASIC6.63□□□□□ -1.35
ATN1P54259 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.63□□□□□ -1.35
ATN1P54259 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
ATN1P54259 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
ATN1P54259 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
ATN1P54259 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
ATN1P54259 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.63□□□□□ -1.35
ATN1P54259 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
ATN1P54259 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
ATN1P54259 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
ATN1P54259 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
ATN1P54259 AC018529.3-201ENST00000624212 2254 ntBASIC6.62□□□□□ -1.35
ATN1P54259 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
ATN1P54259 Z82209.1-201ENST00000422141 2135 ntBASIC6.62□□□□□ -1.35
ATN1P54259 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 238.2 ms