Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
NUBP1P53384 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
NUBP1P53384 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NUBP1P53384 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
NUBP1P53384 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.39□□□□□ -1.39
NUBP1P53384 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NUBP1P53384 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NUBP1P53384 GAPVD1-207ENST00000394105 5207 ntAPPRIS P3 TSL 5 BASIC6.39□□□□□ -1.39
NUBP1P53384 AC005332.5-201ENST00000591222 2919 ntBASIC6.39□□□□□ -1.39
NUBP1P53384 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NUBP1P53384 RNU1-134P-201ENST00000362935 165 ntBASIC6.39□□□□□ -1.39
NUBP1P53384 RNA5SP346-201ENST00000363541 121 ntBASIC6.39□□□□□ -1.39
NUBP1P53384 SNORD115-30-201ENST00000364117 82 ntBASIC6.39□□□□□ -1.39
NUBP1P53384 RNU6-1082P-201ENST00000364574 107 ntBASIC6.39□□□□□ -1.39
NUBP1P53384 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.39□□□□□ -1.39
NUBP1P53384 AC245096.1-201ENST00000413104 546 ntBASIC6.39□□□□□ -1.39
NUBP1P53384 AC245884.2-201ENST00000426257 404 ntBASIC6.39□□□□□ -1.39
NUBP1P53384 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC6.39□□□□□ -1.39
NUBP1P53384 AC009237.8-201ENST00000445492 379 ntBASIC6.39□□□□□ -1.39
NUBP1P53384 RNU7-141P-201ENST00000459304 62 ntBASIC6.39□□□□□ -1.39
NUBP1P53384 RN7SL870P-201ENST00000460111 296 ntBASIC6.39□□□□□ -1.39
NUBP1P53384 RNU1-103P-201ENST00000516502 125 ntBASIC6.39□□□□□ -1.39
NUBP1P53384 RNA5SP434-201ENST00000516647 121 ntBASIC6.39□□□□□ -1.39
NUBP1P53384 SNORA31.20-201ENST00000517111 133 ntBASIC6.39□□□□□ -1.39
NUBP1P53384 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC6.39□□□□□ -1.39
NUBP1P53384 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.39□□□□□ -1.39
NUBP1P53384 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NUBP1P53384 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC6.39□□□□□ -1.39
NUBP1P53384 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC6.39□□□□□ -1.39
NUBP1P53384 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
NUBP1P53384 MFSD8-218ENST00000641186 4448 ntBASIC6.39□□□□□ -1.39
NUBP1P53384 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC6.39□□□□□ -1.39
NUBP1P53384 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NUBP1P53384 AC034111.1-201ENST00000562143 3770 ntBASIC6.39□□□□□ -1.39
NUBP1P53384 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.39□□□□□ -1.39
NUBP1P53384 AC138915.1-201ENST00000565427 1685 ntBASIC6.39□□□□□ -1.39
NUBP1P53384 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC6.39□□□□□ -1.39
NUBP1P53384 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
NUBP1P53384 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NUBP1P53384 AC018555.1-201ENST00000567548 1980 ntBASIC6.38□□□□□ -1.39
NUBP1P53384 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC6.38□□□□□ -1.39
NUBP1P53384 THOC1-201ENST00000261600 2087 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
NUBP1P53384 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NUBP1P53384 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
NUBP1P53384 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NUBP1P53384 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NUBP1P53384 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NUBP1P53384 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NUBP1P53384 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
NUBP1P53384 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NUBP1P53384 MIR375-201ENST00000362103 64 ntBASIC6.38□□□□□ -1.39
NUBP1P53384 RNU1-150P-201ENST00000362491 162 ntBASIC6.38□□□□□ -1.39
NUBP1P53384 RNA5SP65-201ENST00000363166 119 ntBASIC6.38□□□□□ -1.39
NUBP1P53384 RNA5SP514-201ENST00000363717 111 ntBASIC6.38□□□□□ -1.39
NUBP1P53384 RNU1-146P-201ENST00000364015 165 ntBASIC6.38□□□□□ -1.39
NUBP1P53384 RNU6-140P-201ENST00000384566 108 ntBASIC6.38□□□□□ -1.39
NUBP1P53384 Y_RNA.630-201ENST00000411370 108 ntBASIC6.38□□□□□ -1.39
NUBP1P53384 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC6.38□□□□□ -1.39
NUBP1P53384 RN7SL329P-201ENST00000467740 299 ntBASIC6.38□□□□□ -1.39
NUBP1P53384 AL122020.1-201ENST00000472287 459 ntBASIC6.38□□□□□ -1.39
NUBP1P53384 CKS1BP7-201ENST00000522230 235 ntBASIC6.38□□□□□ -1.39
NUBP1P53384 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.38□□□□□ -1.39
NUBP1P53384 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC6.38□□□□□ -1.39
NUBP1P53384 AC087575.1-201ENST00000585087 229 ntBASIC6.38□□□□□ -1.39
NUBP1P53384 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.38□□□□□ -1.39
NUBP1P53384 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC6.38□□□□□ -1.39
NUBP1P53384 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
NUBP1P53384 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NUBP1P53384 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
NUBP1P53384 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
NUBP1P53384 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
NUBP1P53384 AC012254.3-201ENST00000591183 2117 ntBASIC6.38□□□□□ -1.39
NUBP1P53384 AL512662.1-201ENST00000624850 2251 ntBASIC6.38□□□□□ -1.39
NUBP1P53384 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NUBP1P53384 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NUBP1P53384 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NUBP1P53384 AC022819.1-201ENST00000563495 3910 ntBASIC6.38□□□□□ -1.39
NUBP1P53384 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC6.38□□□□□ -1.39
NUBP1P53384 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC6.38□□□□□ -1.39
NUBP1P53384 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC6.37□□□□□ -1.39
NUBP1P53384 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.37□□□□□ -1.39
NUBP1P53384 TTC41P-205ENST00000551270 3963 ntBASIC6.37□□□□□ -1.39
NUBP1P53384 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.37□□□□□ -1.39
NUBP1P53384 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
NUBP1P53384 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
NUBP1P53384 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.37□□□□□ -1.39
NUBP1P53384 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC6.37□□□□□ -1.39
NUBP1P53384 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.37□□□□□ -1.39
NUBP1P53384 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
NUBP1P53384 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC6.37□□□□□ -1.39
NUBP1P53384 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
NUBP1P53384 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
NUBP1P53384 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
NUBP1P53384 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
NUBP1P53384 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NUBP1P53384 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.37□□□□□ -1.39
NUBP1P53384 Y_RNA.280-201ENST00000364765 112 ntBASIC6.37□□□□□ -1.39
NUBP1P53384 RNU1-100P-201ENST00000365255 165 ntBASIC6.37□□□□□ -1.39
NUBP1P53384 RPS4XP23-201ENST00000487801 237 ntBASIC6.37□□□□□ -1.39
NUBP1P53384 AP004371.1-201ENST00000525240 214 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms