Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SOX2P48431 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SOX2P48431 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SOX2P48431 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SOX2P48431 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.55□□□□□ -1.84
SOX2P48431 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SOX2P48431 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SOX2P48431 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SOX2P48431 AL354685.2-201ENST00000448218 1447 ntBASIC3.55□□□□□ -1.84
SOX2P48431 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
SOX2P48431 RN7SKP103-201ENST00000363848 320 ntBASIC3.55□□□□□ -1.84
SOX2P48431 SNORA24.1-201ENST00000384401 135 ntBASIC3.55□□□□□ -1.84
SOX2P48431 MIR129-1-201ENST00000384972 72 ntBASIC3.55□□□□□ -1.84
SOX2P48431 RNU2-41P-201ENST00000410991 178 ntBASIC3.55□□□□□ -1.84
SOX2P48431 RPL23AP1-201ENST00000428990 471 ntBASIC3.55□□□□□ -1.84
SOX2P48431 AC024082.2-201ENST00000434771 238 ntBASIC3.55□□□□□ -1.84
SOX2P48431 AF228730.2-201ENST00000438784 848 ntBASIC3.55□□□□□ -1.84
SOX2P48431 AC006011.1-201ENST00000442758 349 ntBASIC3.55□□□□□ -1.84
SOX2P48431 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.55□□□□□ -1.84
SOX2P48431 CBWD4P-201ENST00000445695 655 ntBASIC3.55□□□□□ -1.84
SOX2P48431 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.55□□□□□ -1.84
SOX2P48431 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.55□□□□□ -1.84
SOX2P48431 AP000873.1-201ENST00000463987 400 ntBASIC3.55□□□□□ -1.84
SOX2P48431 VN1R105P-201ENST00000486595 910 ntBASIC3.55□□□□□ -1.84
SOX2P48431 RN7SL810P-201ENST00000493031 276 ntBASIC3.55□□□□□ -1.84
SOX2P48431 RPL23AP55-201ENST00000498163 452 ntBASIC3.55□□□□□ -1.84
SOX2P48431 MLLT10P2-201ENST00000506434 249 ntBASIC3.55□□□□□ -1.84
SOX2P48431 AC111000.3-201ENST00000508057 576 ntBASIC3.55□□□□□ -1.84
SOX2P48431 KLHL2P1-201ENST00000508691 521 ntBASIC3.55□□□□□ -1.84
SOX2P48431 AC010486.1-201ENST00000511793 424 ntBASIC3.55□□□□□ -1.84
SOX2P48431 RNU4-29P-201ENST00000515943 174 ntBASIC3.55□□□□□ -1.84
SOX2P48431 RNA5SP143-201ENST00000516936 115 ntBASIC3.55□□□□□ -1.84
SOX2P48431 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.55□□□□□ -1.84
SOX2P48431 ERHP1-201ENST00000523006 310 ntBASIC3.55□□□□□ -1.84
SOX2P48431 OR5B19P-201ENST00000531766 928 ntBASIC3.55□□□□□ -1.84
SOX2P48431 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.55□□□□□ -1.84
SOX2P48431 AC107016.1-201ENST00000550463 337 ntBASIC3.55□□□□□ -1.84
SOX2P48431 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SOX2P48431 AL138976.2-201ENST00000563989 694 ntBASIC3.55□□□□□ -1.84
SOX2P48431 MIR4703-201ENST00000577728 79 ntBASIC3.55□□□□□ -1.84
SOX2P48431 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.55□□□□□ -1.84
SOX2P48431 AC024619.4-201ENST00000580924 316 ntBASIC3.55□□□□□ -1.84
SOX2P48431 AC011712.1-201ENST00000588959 234 ntBASIC3.55□□□□□ -1.84
SOX2P48431 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.55□□□□□ -1.84
SOX2P48431 MIR486-1-201ENST00000612171 68 ntBASIC3.55□□□□□ -1.84
SOX2P48431 MIR6780A-201ENST00000615089 68 ntBASIC3.55□□□□□ -1.84
SOX2P48431 AP001486.3-201ENST00000615334 372 ntBASIC3.55□□□□□ -1.84
SOX2P48431 AC010338.1-201ENST00000621823 717 ntBASIC3.55□□□□□ -1.84
SOX2P48431 AL137003.2-201ENST00000606924 2538 ntBASIC3.55□□□□□ -1.84
SOX2P48431 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.55□□□□□ -1.84
SOX2P48431 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
SOX2P48431 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.55□□□□□ -1.84
SOX2P48431 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SOX2P48431 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SOX2P48431 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.55□□□□□ -1.84
SOX2P48431 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SOX2P48431 AC073544.1-201ENST00000600110 1595 ntBASIC3.55□□□□□ -1.84
SOX2P48431 AC092326.2-201ENST00000624772 1561 ntBASIC3.55□□□□□ -1.84
SOX2P48431 MAPK10-373ENST00000641983 6772 ntBASIC3.55□□□□□ -1.84
SOX2P48431 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SOX2P48431 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SOX2P48431 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SOX2P48431 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.54□□□□□ -1.84
SOX2P48431 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
SOX2P48431 ASNSP3-201ENST00000451989 1306 ntBASIC3.54□□□□□ -1.84
SOX2P48431 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.54□□□□□ -1.84
SOX2P48431 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
SOX2P48431 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
SOX2P48431 RNU6-552P-201ENST00000362869 119 ntBASIC3.54□□□□□ -1.84
SOX2P48431 RNA5SP322-201ENST00000363617 119 ntBASIC3.54□□□□□ -1.84
SOX2P48431 RNU6-173P-201ENST00000364215 104 ntBASIC3.54□□□□□ -1.84
SOX2P48431 SNORA58B-201ENST00000364259 136 ntBASIC3.54□□□□□ -1.84
SOX2P48431 RNU6-61P-201ENST00000365528 109 ntBASIC3.54□□□□□ -1.84
SOX2P48431 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
SOX2P48431 RNU6-701P-201ENST00000384059 107 ntBASIC3.54□□□□□ -1.84
SOX2P48431 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.54□□□□□ -1.84
SOX2P48431 NDUFS5P1-201ENST00000405668 289 ntBASIC3.54□□□□□ -1.84
SOX2P48431 RNU6-193P-201ENST00000410977 107 ntBASIC3.54□□□□□ -1.84
SOX2P48431 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.54□□□□□ -1.84
SOX2P48431 MTCO1P39-201ENST00000426148 480 ntBASIC3.54□□□□□ -1.84
SOX2P48431 MTATP6P4-201ENST00000427725 675 ntBASIC3.54□□□□□ -1.84
SOX2P48431 AC079780.1-201ENST00000428259 207 ntBASIC3.54□□□□□ -1.84
SOX2P48431 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.54□□□□□ -1.84
SOX2P48431 MTND3P23-201ENST00000431980 347 ntBASIC3.54□□□□□ -1.84
SOX2P48431 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.54□□□□□ -1.84
SOX2P48431 RPL7P28-201ENST00000437739 740 ntBASIC3.54□□□□□ -1.84
SOX2P48431 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.54□□□□□ -1.84
SOX2P48431 RN7SL610P-201ENST00000463845 291 ntBASIC3.54□□□□□ -1.84
SOX2P48431 RPL9P32-201ENST00000464118 620 ntBASIC3.54□□□□□ -1.84
SOX2P48431 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SOX2P48431 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.54□□□□□ -1.84
SOX2P48431 RN7SL691P-201ENST00000494487 301 ntBASIC3.54□□□□□ -1.84
SOX2P48431 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.54□□□□□ -1.84
SOX2P48431 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.54□□□□□ -1.84
SOX2P48431 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.54□□□□□ -1.84
SOX2P48431 AC092436.1-201ENST00000506450 503 ntBASIC3.54□□□□□ -1.84
SOX2P48431 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.54□□□□□ -1.84
SOX2P48431 AC004062.1-201ENST00000509926 645 ntBASIC3.54□□□□□ -1.84
SOX2P48431 AC108078.2-201ENST00000510750 236 ntBASIC3.54□□□□□ -1.84
SOX2P48431 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 156.7 ms