Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 AL392048.1-201ENST00000613946 534 ntBASIC2.97□□□□□ -1.93
CDX1P47902 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.97□□□□□ -1.93
CDX1P47902 uc_338.12-201ENST00000616344 181 ntBASIC2.97□□□□□ -1.93
CDX1P47902 AC116165.2-201ENST00000616705 206 ntBASIC2.97□□□□□ -1.93
CDX1P47902 AC022079.1-201ENST00000621546 602 ntBASIC2.97□□□□□ -1.93
CDX1P47902 AC091953.2-201ENST00000623979 160 ntBASIC2.97□□□□□ -1.93
CDX1P47902 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC2.97□□□□□ -1.93
CDX1P47902 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.97□□□□□ -1.93
CDX1P47902 MIR3974-201ENST00000637126 96 ntBASIC2.97□□□□□ -1.93
CDX1P47902 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CDX1P47902 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CDX1P47902 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CDX1P47902 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
CDX1P47902 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.96□□□□□ -1.94
CDX1P47902 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.96□□□□□ -1.94
CDX1P47902 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC2.96□□□□□ -1.94
CDX1P47902 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC2.96□□□□□ -1.94
CDX1P47902 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CDX1P47902 OR1S2-201ENST00000302592 978 ntBASIC2.96□□□□□ -1.94
CDX1P47902 SNORA14A-201ENST00000364773 135 ntBASIC2.96□□□□□ -1.94
CDX1P47902 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC2.96□□□□□ -1.94
CDX1P47902 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CDX1P47902 RPL21P17-201ENST00000397467 475 ntBASIC2.96□□□□□ -1.94
CDX1P47902 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
CDX1P47902 Z85995.1-201ENST00000415547 335 ntBASIC2.96□□□□□ -1.94
CDX1P47902 AC245291.1-201ENST00000419501 328 ntBASIC2.96□□□□□ -1.94
CDX1P47902 HSPE1P1-201ENST00000421494 318 ntBASIC2.96□□□□□ -1.94
CDX1P47902 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.96□□□□□ -1.94
CDX1P47902 AC019097.1-201ENST00000424783 735 ntBASIC2.96□□□□□ -1.94
CDX1P47902 AP000907.1-201ENST00000428428 510 ntBASIC2.96□□□□□ -1.94
CDX1P47902 FCF1P1-201ENST00000432690 571 ntBASIC2.96□□□□□ -1.94
CDX1P47902 OR2B8P-201ENST00000432841 938 ntBASIC2.96□□□□□ -1.94
CDX1P47902 Z82210.1-201ENST00000440037 231 ntBASIC2.96□□□□□ -1.94
CDX1P47902 AC093156.1-201ENST00000440382 670 ntBASIC2.96□□□□□ -1.94
CDX1P47902 MTATP6P30-201ENST00000443540 664 ntBASIC2.96□□□□□ -1.94
CDX1P47902 AC010099.1-201ENST00000455434 375 ntBASIC2.96□□□□□ -1.94
CDX1P47902 SNRPFP4-201ENST00000456366 242 ntBASIC2.96□□□□□ -1.94
CDX1P47902 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC2.96□□□□□ -1.94
CDX1P47902 AL133162.1-201ENST00000463228 453 ntBASIC2.96□□□□□ -1.94
CDX1P47902 AC104472.2-201ENST00000469035 601 ntBASIC2.96□□□□□ -1.94
CDX1P47902 RPL7P5-201ENST00000471472 736 ntBASIC2.96□□□□□ -1.94
CDX1P47902 AL135752.1-201ENST00000479477 471 ntBASIC2.96□□□□□ -1.94
CDX1P47902 HMGN1P11-201ENST00000508668 303 ntBASIC2.96□□□□□ -1.94
CDX1P47902 AC010486.3-201ENST00000511602 785 ntBASIC2.96□□□□□ -1.94
CDX1P47902 SNORA67.7-201ENST00000516664 135 ntBASIC2.96□□□□□ -1.94
CDX1P47902 RNU6-352P-201ENST00000516908 107 ntBASIC2.96□□□□□ -1.94
CDX1P47902 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC2.96□□□□□ -1.94
CDX1P47902 AC128657.1-201ENST00000549459 145 ntBASIC2.96□□□□□ -1.94
CDX1P47902 HIGD1AP1-201ENST00000550979 275 ntBASIC2.96□□□□□ -1.94
CDX1P47902 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.96□□□□□ -1.94
CDX1P47902 HMGB1P6-201ENST00000569046 646 ntBASIC2.96□□□□□ -1.94
CDX1P47902 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.96□□□□□ -1.94
CDX1P47902 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC2.96□□□□□ -1.94
CDX1P47902 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.96□□□□□ -1.94
CDX1P47902 BNIP3P8-201ENST00000597863 560 ntBASIC2.96□□□□□ -1.94
CDX1P47902 DPPA3P3-201ENST00000603842 430 ntBASIC2.96□□□□□ -1.94
CDX1P47902 AP000860.1-201ENST00000605250 559 ntBASIC2.96□□□□□ -1.94
CDX1P47902 AC068276.1-201ENST00000605793 379 ntBASIC2.96□□□□□ -1.94
CDX1P47902 AC006133.1-201ENST00000617106 264 ntBASIC2.96□□□□□ -1.94
CDX1P47902 CR392039.5-201ENST00000623201 510 ntBASIC2.96□□□□□ -1.94
CDX1P47902 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.96□□□□□ -1.94
CDX1P47902 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
CDX1P47902 AC233263.6-201ENST00000631132 1963 ntBASIC2.96□□□□□ -1.94
CDX1P47902 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CDX1P47902 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
CDX1P47902 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CDX1P47902 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
CDX1P47902 MIR30E-201ENST00000362104 92 ntBASIC2.95□□□□□ -1.94
CDX1P47902 MIR148B-201ENST00000362252 99 ntBASIC2.95□□□□□ -1.94
CDX1P47902 RNU4-21P-201ENST00000362802 126 ntBASIC2.95□□□□□ -1.94
CDX1P47902 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CDX1P47902 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
CDX1P47902 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CDX1P47902 AC009518.2-201ENST00000418056 731 ntBASIC2.95□□□□□ -1.94
CDX1P47902 AC090960.1-201ENST00000421072 306 ntBASIC2.95□□□□□ -1.94
CDX1P47902 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.95□□□□□ -1.94
CDX1P47902 RPL23AP82-202ENST00000427528 469 ntBASIC2.95□□□□□ -1.94
CDX1P47902 AL445584.1-201ENST00000431451 330 ntBASIC2.95□□□□□ -1.94
CDX1P47902 AC119618.1-201ENST00000434191 222 ntBASIC2.95□□□□□ -1.94
CDX1P47902 Z74696.2-201ENST00000436514 498 ntBASIC2.95□□□□□ -1.94
CDX1P47902 ISCA1P2-201ENST00000438679 421 ntBASIC2.95□□□□□ -1.94
CDX1P47902 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.95□□□□□ -1.94
CDX1P47902 AC016696.1-201ENST00000446949 318 ntBASIC2.95□□□□□ -1.94
CDX1P47902 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC2.95□□□□□ -1.94
CDX1P47902 RPS27AP8-201ENST00000452665 445 ntBASIC2.95□□□□□ -1.94
CDX1P47902 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.95□□□□□ -1.94
CDX1P47902 SNRPGP9-201ENST00000456025 225 ntBASIC2.95□□□□□ -1.94
CDX1P47902 snoU13.28-201ENST00000459235 104 ntBASIC2.95□□□□□ -1.94
CDX1P47902 RPL37P6-201ENST00000460682 294 ntBASIC2.95□□□□□ -1.94
CDX1P47902 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.95□□□□□ -1.94
CDX1P47902 ACTR3P3-201ENST00000480448 893 ntBASIC2.95□□□□□ -1.94
CDX1P47902 RN7SL283P-201ENST00000489055 303 ntBASIC2.95□□□□□ -1.94
CDX1P47902 AL160314.1-201ENST00000490836 438 ntBASIC2.95□□□□□ -1.94
CDX1P47902 FCF1P3-201ENST00000496394 590 ntBASIC2.95□□□□□ -1.94
CDX1P47902 SCARNA14-201ENST00000516903 136 ntBASIC2.95□□□□□ -1.94
CDX1P47902 AC022695.1-201ENST00000522089 237 ntBASIC2.95□□□□□ -1.94
CDX1P47902 AP003181.2-201ENST00000528941 181 ntBASIC2.95□□□□□ -1.94
CDX1P47902 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CDX1P47902 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.95□□□□□ -1.94
CDX1P47902 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms