Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 RPL31P12-201ENST00000422587 358 ntBASIC4.46□□□□□ -1.7
HOXC12P31275 COX6CP13-201ENST00000428703 226 ntBASIC4.46□□□□□ -1.7
HOXC12P31275 DNAJC19P7-201ENST00000428811 344 ntBASIC4.46□□□□□ -1.7
HOXC12P31275 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXC12P31275 AC009238.2-201ENST00000431026 355 ntBASIC4.46□□□□□ -1.7
HOXC12P31275 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.46□□□□□ -1.7
HOXC12P31275 KNOP1P3-201ENST00000446933 426 ntBASIC4.46□□□□□ -1.7
HOXC12P31275 AC008264.1-201ENST00000447612 367 ntBASIC4.46□□□□□ -1.7
HOXC12P31275 ELOCP24-201ENST00000456370 334 ntBASIC4.46□□□□□ -1.7
HOXC12P31275 RPL21P41-201ENST00000459863 264 ntBASIC4.46□□□□□ -1.7
HOXC12P31275 AL049874.1-201ENST00000489560 388 ntBASIC4.46□□□□□ -1.7
HOXC12P31275 AC025164.1-201ENST00000496249 478 ntBASIC4.46□□□□□ -1.7
HOXC12P31275 RNU6-914P-201ENST00000516749 109 ntBASIC4.46□□□□□ -1.7
HOXC12P31275 RNU6-1213P-201ENST00000517075 94 ntBASIC4.46□□□□□ -1.7
HOXC12P31275 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC4.46□□□□□ -1.7
HOXC12P31275 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.46□□□□□ -1.7
HOXC12P31275 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.46□□□□□ -1.7
HOXC12P31275 SNRPGP18-201ENST00000553000 214 ntBASIC4.46□□□□□ -1.7
HOXC12P31275 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXC12P31275 MIR5692A1-201ENST00000580523 69 ntBASIC4.46□□□□□ -1.7
HOXC12P31275 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXC12P31275 AC068790.4-201ENST00000602474 263 ntBASIC4.46□□□□□ -1.7
HOXC12P31275 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.46□□□□□ -1.7
HOXC12P31275 MIR6780A-201ENST00000615089 68 ntBASIC4.46□□□□□ -1.7
HOXC12P31275 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
HOXC12P31275 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
HOXC12P31275 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.7
HOXC12P31275 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HOXC12P31275 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
HOXC12P31275 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HOXC12P31275 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HOXC12P31275 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.45□□□□□ -1.7
HOXC12P31275 MTND5P19-201ENST00000424872 1794 ntBASIC4.45□□□□□ -1.7
HOXC12P31275 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC4.45□□□□□ -1.7
HOXC12P31275 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.45□□□□□ -1.7
HOXC12P31275 AC011755.1-201ENST00000623763 2049 ntBASIC4.45□□□□□ -1.7
HOXC12P31275 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HOXC12P31275 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.45□□□□□ -1.7
HOXC12P31275 AC126755.2-208ENST00000327792 462 ntBASIC4.45□□□□□ -1.7
HOXC12P31275 AC138969.1-213ENST00000331436 462 ntBASIC4.45□□□□□ -1.7
HOXC12P31275 RN7SKP95-201ENST00000362860 303 ntBASIC4.45□□□□□ -1.7
HOXC12P31275 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
HOXC12P31275 SNORA22B-201ENST00000383876 138 ntBASIC4.45□□□□□ -1.7
HOXC12P31275 RNU6-308P-201ENST00000390957 107 ntBASIC4.45□□□□□ -1.7
HOXC12P31275 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC4.45□□□□□ -1.7
HOXC12P31275 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.45□□□□□ -1.7
HOXC12P31275 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.45□□□□□ -1.7
HOXC12P31275 AL590632.1-201ENST00000424289 371 ntBASIC4.45□□□□□ -1.7
HOXC12P31275 AL451062.2-201ENST00000427515 271 ntBASIC4.45□□□□□ -1.7
HOXC12P31275 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.45□□□□□ -1.7
HOXC12P31275 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.45□□□□□ -1.7
HOXC12P31275 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.45□□□□□ -1.7
HOXC12P31275 CYCSP24-201ENST00000445119 316 ntBASIC4.45□□□□□ -1.7
HOXC12P31275 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.45□□□□□ -1.7
HOXC12P31275 RNA5SP103-201ENST00000459503 118 ntBASIC4.45□□□□□ -1.7
HOXC12P31275 AC108860.1-201ENST00000484521 383 ntBASIC4.45□□□□□ -1.7
HOXC12P31275 RPS15AP34-201ENST00000487776 387 ntBASIC4.45□□□□□ -1.7
HOXC12P31275 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.45□□□□□ -1.7
HOXC12P31275 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.45□□□□□ -1.7
HOXC12P31275 OR7H2P-201ENST00000513483 306 ntBASIC4.45□□□□□ -1.7
HOXC12P31275 RNU4ATAC7P-201ENST00000516280 125 ntBASIC4.45□□□□□ -1.7
HOXC12P31275 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.45□□□□□ -1.7
HOXC12P31275 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
HOXC12P31275 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.45□□□□□ -1.7
HOXC12P31275 NDUFB4P11-201ENST00000560510 395 ntBASIC4.45□□□□□ -1.7
HOXC12P31275 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.45□□□□□ -1.7
HOXC12P31275 AC022884.2-201ENST00000578535 580 ntBASIC4.45□□□□□ -1.7
HOXC12P31275 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.45□□□□□ -1.7
HOXC12P31275 AP000942.4-201ENST00000604811 241 ntBASIC4.45□□□□□ -1.7
HOXC12P31275 AC034102.8-201ENST00000615146 484 ntBASIC4.45□□□□□ -1.7
HOXC12P31275 AC133104.2-201ENST00000615272 193 ntBASIC4.45□□□□□ -1.7
HOXC12P31275 MIR7703-201ENST00000620784 77 ntBASIC4.45□□□□□ -1.7
HOXC12P31275 uc_338.22-201ENST00000622722 187 ntBASIC4.45□□□□□ -1.7
HOXC12P31275 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
HOXC12P31275 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.45□□□□□ -1.7
HOXC12P31275 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HOXC12P31275 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
HOXC12P31275 AC092376.2-201ENST00000622621 4116 ntBASIC4.45□□□□□ -1.7
HOXC12P31275 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HOXC12P31275 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HOXC12P31275 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HOXC12P31275 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
HOXC12P31275 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
HOXC12P31275 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HOXC12P31275 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.44□□□□□ -1.7
HOXC12P31275 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HOXC12P31275 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.44□□□□□ -1.7
HOXC12P31275 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
HOXC12P31275 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HOXC12P31275 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HOXC12P31275 RNU6-310P-201ENST00000384655 107 ntBASIC4.44□□□□□ -1.7
HOXC12P31275 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
HOXC12P31275 AL513331.1-201ENST00000411908 397 ntBASIC4.44□□□□□ -1.7
HOXC12P31275 AC079809.1-201ENST00000415468 276 ntBASIC4.44□□□□□ -1.7
HOXC12P31275 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.44□□□□□ -1.7
HOXC12P31275 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.44□□□□□ -1.7
HOXC12P31275 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HOXC12P31275 AC068287.1-201ENST00000430283 295 ntBASIC4.44□□□□□ -1.7
HOXC12P31275 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.44□□□□□ -1.7
HOXC12P31275 HSFY6P-201ENST00000445573 403 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms