Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 RNU6-432P-201ENST00000384196 109 ntBASIC3.58□□□□□ -1.84
HOXA13P31271 SNORA54-201ENST00000384281 123 ntBASIC3.58□□□□□ -1.84
HOXA13P31271 MIR184-201ENST00000384962 84 ntBASIC3.58□□□□□ -1.84
HOXA13P31271 SNORD67-201ENST00000390833 111 ntBASIC3.58□□□□□ -1.84
HOXA13P31271 AL138878.1-201ENST00000405131 347 ntBASIC3.58□□□□□ -1.84
HOXA13P31271 CCNG1P1-201ENST00000406783 885 ntBASIC3.58□□□□□ -1.84
HOXA13P31271 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.58□□□□□ -1.84
HOXA13P31271 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXA13P31271 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXA13P31271 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXA13P31271 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.58□□□□□ -1.84
HOXA13P31271 BX679664.1-201ENST00000434429 253 ntBASIC3.58□□□□□ -1.84
HOXA13P31271 RABEPKP1-201ENST00000440529 1026 ntBASIC3.58□□□□□ -1.84
HOXA13P31271 GDI2P2-201ENST00000445131 608 ntBASIC3.58□□□□□ -1.84
HOXA13P31271 BMI1P1-201ENST00000445879 941 ntBASIC3.58□□□□□ -1.84
HOXA13P31271 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.58□□□□□ -1.84
HOXA13P31271 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXA13P31271 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXA13P31271 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.58□□□□□ -1.84
HOXA13P31271 AC078785.3-201ENST00000476607 425 ntBASIC3.58□□□□□ -1.84
HOXA13P31271 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXA13P31271 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXA13P31271 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXA13P31271 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXA13P31271 HMGB3P15-201ENST00000507326 574 ntBASIC3.58□□□□□ -1.84
HOXA13P31271 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.58□□□□□ -1.84
HOXA13P31271 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXA13P31271 AC022483.1-201ENST00000514020 567 ntBASIC3.58□□□□□ -1.84
HOXA13P31271 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXA13P31271 AP001804.3-201ENST00000525146 880 ntBASIC3.58□□□□□ -1.84
HOXA13P31271 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.58□□□□□ -1.84
HOXA13P31271 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HOXA13P31271 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXA13P31271 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXA13P31271 MED28P6-201ENST00000558776 231 ntBASIC3.58□□□□□ -1.84
HOXA13P31271 ACTR3BP3-201ENST00000565577 979 ntBASIC3.58□□□□□ -1.84
HOXA13P31271 AC091489.2-201ENST00000566263 604 ntBASIC3.58□□□□□ -1.84
HOXA13P31271 AC012414.6-201ENST00000568241 401 ntBASIC3.58□□□□□ -1.84
HOXA13P31271 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.58□□□□□ -1.84
HOXA13P31271 U73023.1-201ENST00000603134 700 ntBASIC3.58□□□□□ -1.84
HOXA13P31271 AP000403.1-201ENST00000603349 851 ntBASIC3.58□□□□□ -1.84
HOXA13P31271 AC103591.3-201ENST00000608684 209 ntBASIC3.58□□□□□ -1.84
HOXA13P31271 AC012360.2-201ENST00000609349 391 ntBASIC3.58□□□□□ -1.84
HOXA13P31271 OR10AB1P-201ENST00000609613 938 ntBASIC3.58□□□□□ -1.84
HOXA13P31271 AC011939.3-201ENST00000613686 466 ntBASIC3.58□□□□□ -1.84
HOXA13P31271 AC099506.2-201ENST00000623074 221 ntBASIC3.58□□□□□ -1.84
HOXA13P31271 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
HOXA13P31271 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HOXA13P31271 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.58□□□□□ -1.84
HOXA13P31271 AC092326.2-201ENST00000624772 1561 ntBASIC3.58□□□□□ -1.84
HOXA13P31271 TAB3P1-202ENST00000452645 1634 ntBASIC3.58□□□□□ -1.84
HOXA13P31271 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
HOXA13P31271 AL672296.1-201ENST00000427780 2158 ntBASIC3.58□□□□□ -1.84
HOXA13P31271 AC009902.3-201ENST00000606235 2172 ntBASIC3.58□□□□□ -1.84
HOXA13P31271 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HOXA13P31271 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.58□□□□□ -1.84
HOXA13P31271 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
HOXA13P31271 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
HOXA13P31271 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.57□□□□□ -1.84
HOXA13P31271 RNU6-533P-201ENST00000384144 107 ntBASIC3.57□□□□□ -1.84
HOXA13P31271 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
HOXA13P31271 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
HOXA13P31271 NDUFB4P4-201ENST00000404822 243 ntBASIC3.57□□□□□ -1.84
HOXA13P31271 AC096664.2-201ENST00000411843 406 ntBASIC3.57□□□□□ -1.84
HOXA13P31271 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.57□□□□□ -1.84
HOXA13P31271 COX6CP12-201ENST00000446748 202 ntBASIC3.57□□□□□ -1.84
HOXA13P31271 HMGN1P18-201ENST00000457642 277 ntBASIC3.57□□□□□ -1.84
HOXA13P31271 AC010401.1-201ENST00000463867 348 ntBASIC3.57□□□□□ -1.84
HOXA13P31271 S100A11P2-201ENST00000467589 312 ntBASIC3.57□□□□□ -1.84
HOXA13P31271 RPL27AP5-201ENST00000469428 449 ntBASIC3.57□□□□□ -1.84
HOXA13P31271 AC109486.1-201ENST00000486833 374 ntBASIC3.57□□□□□ -1.84
HOXA13P31271 AC010424.1-201ENST00000506336 297 ntBASIC3.57□□□□□ -1.84
HOXA13P31271 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.57□□□□□ -1.84
HOXA13P31271 SCARNA20.6-201ENST00000517251 106 ntBASIC3.57□□□□□ -1.84
HOXA13P31271 RNU6-840P-201ENST00000517275 65 ntBASIC3.57□□□□□ -1.84
HOXA13P31271 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HOXA13P31271 HIGD1AP10-201ENST00000527837 282 ntBASIC3.57□□□□□ -1.84
HOXA13P31271 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.57□□□□□ -1.84
HOXA13P31271 AC106782.4-201ENST00000568264 210 ntBASIC3.57□□□□□ -1.84
HOXA13P31271 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.57□□□□□ -1.84
HOXA13P31271 AC068790.3-201ENST00000602988 553 ntBASIC3.57□□□□□ -1.84
HOXA13P31271 AC064872.1-201ENST00000604823 1072 ntBASIC3.57□□□□□ -1.84
HOXA13P31271 AC106900.2-201ENST00000604994 317 ntBASIC3.57□□□□□ -1.84
HOXA13P31271 AC004067.1-201ENST00000608733 700 ntBASIC3.57□□□□□ -1.84
HOXA13P31271 AP002826.1-201ENST00000608835 315 ntBASIC3.57□□□□□ -1.84
HOXA13P31271 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.57□□□□□ -1.84
HOXA13P31271 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.57□□□□□ -1.84
HOXA13P31271 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.57□□□□□ -1.84
HOXA13P31271 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
HOXA13P31271 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.56□□□□□ -1.84
HOXA13P31271 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
HOXA13P31271 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
HOXA13P31271 AL355596.1-201ENST00000565399 3996 ntBASIC3.56□□□□□ -1.84
HOXA13P31271 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HOXA13P31271 MIR423-201ENST00000362201 94 ntBASIC3.56□□□□□ -1.84
HOXA13P31271 RNY4P24-201ENST00000362735 96 ntBASIC3.56□□□□□ -1.84
HOXA13P31271 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.56□□□□□ -1.84
HOXA13P31271 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.56□□□□□ -1.84
HOXA13P31271 AC006366.1-201ENST00000422002 759 ntBASIC3.56□□□□□ -1.84
HOXA13P31271 AC233728.2-201ENST00000425348 757 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms