Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
CLIP1P30622 MIR627-201ENST00000384979 97 ntBASIC2.03□□□□□ -2.08
CLIP1P30622 MIR758-201ENST00000390227 88 ntBASIC2.03□□□□□ -2.08
CLIP1P30622 AL355497.1-201ENST00000406262 551 ntBASIC2.03□□□□□ -2.08
CLIP1P30622 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.03□□□□□ -2.08
CLIP1P30622 AL358075.3-201ENST00000426289 226 ntBASIC2.03□□□□□ -2.08
CLIP1P30622 NCOR1P1-202ENST00000486162 291 ntBASIC2.03□□□□□ -2.08
CLIP1P30622 RNU4-60P-201ENST00000517239 135 ntBASIC2.03□□□□□ -2.08
CLIP1P30622 AC008962.1-201ENST00000605729 304 ntBASIC2.03□□□□□ -2.08
CLIP1P30622 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.03□□□□□ -2.08
CLIP1P30622 AL133216.2-202ENST00000634512 349 ntBASIC2.03□□□□□ -2.08
CLIP1P30622 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CLIP1P30622 AC073055.1-201ENST00000456901 1621 ntBASIC2.03□□□□□ -2.08
CLIP1P30622 CDC27P3-201ENST00000635418 1910 ntBASIC2.03□□□□□ -2.08
CLIP1P30622 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.02□□□□□ -2.09
CLIP1P30622 SNORA7.2-201ENST00000364446 145 ntBASIC2.02□□□□□ -2.09
CLIP1P30622 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.02□□□□□ -2.09
CLIP1P30622 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.02□□□□□ -2.09
CLIP1P30622 UBE2FP3-201ENST00000436366 524 ntBASIC2.02□□□□□ -2.09
CLIP1P30622 AL353898.1-201ENST00000444055 238 ntBASIC2.02□□□□□ -2.09
CLIP1P30622 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.02□□□□□ -2.09
CLIP1P30622 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.02□□□□□ -2.09
CLIP1P30622 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.02□□□□□ -2.09
CLIP1P30622 RNU4ATAC11P-201ENST00000515939 126 ntBASIC2.02□□□□□ -2.09
CLIP1P30622 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC2.02□□□□□ -2.09
CLIP1P30622 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.02□□□□□ -2.09
CLIP1P30622 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
CLIP1P30622 MIR96-201ENST00000362288 78 ntBASIC2.01□□□□□ -2.09
CLIP1P30622 AC241520.1-201ENST00000422654 1099 ntBASIC2.01□□□□□ -2.09
CLIP1P30622 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.01□□□□□ -2.09
CLIP1P30622 AC093801.2-201ENST00000503966 1050 ntBASIC2.01□□□□□ -2.09
CLIP1P30622 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.01□□□□□ -2.09
CLIP1P30622 ATP5EP1-201ENST00000510257 156 ntBASIC2.01□□□□□ -2.09
CLIP1P30622 RNU2-44P-201ENST00000516795 194 ntBASIC2.01□□□□□ -2.09
CLIP1P30622 MTND2P13-201ENST00000577438 1039 ntBASIC2.01□□□□□ -2.09
CLIP1P30622 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.01□□□□□ -2.09
CLIP1P30622 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.01□□□□□ -2.09
CLIP1P30622 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.01□□□□□ -2.09
CLIP1P30622 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2□□□□□ -2.09
CLIP1P30622 SNORD114-22-201ENST00000365423 72 ntBASIC2□□□□□ -2.09
CLIP1P30622 RNU4-72P-201ENST00000410754 173 ntBASIC2□□□□□ -2.09
CLIP1P30622 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC2□□□□□ -2.09
CLIP1P30622 MTND5P25-201ENST00000430499 799 ntBASIC2□□□□□ -2.09
CLIP1P30622 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2□□□□□ -2.09
CLIP1P30622 HMGN2P18-201ENST00000450680 270 ntBASIC2□□□□□ -2.09
CLIP1P30622 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC2□□□□□ -2.09
CLIP1P30622 AC010627.1-201ENST00000503819 1294 ntBASIC2□□□□□ -2.09
CLIP1P30622 IGHVII-53-1-201ENST00000519538 255 ntBASIC2□□□□□ -2.09
CLIP1P30622 SETP7-201ENST00000552169 453 ntBASIC2□□□□□ -2.09
CLIP1P30622 MTCO1P40-201ENST00000574371 625 ntBASIC2□□□□□ -2.09
CLIP1P30622 RPS15AP11-201ENST00000594193 385 ntBASIC2□□□□□ -2.09
CLIP1P30622 BNIP3P4-201ENST00000604946 565 ntBASIC2□□□□□ -2.09
CLIP1P30622 AC007620.3-201ENST00000608131 497 ntBASIC2□□□□□ -2.09
CLIP1P30622 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CLIP1P30622 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2□□□□□ -2.09
CLIP1P30622 MIR613-201ENST00000385248 95 ntBASIC2□□□□□ -2.09
CLIP1P30622 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2□□□□□ -2.09
CLIP1P30622 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2□□□□□ -2.09
CLIP1P30622 AC136443.5-201ENST00000603741 370 ntBASIC2□□□□□ -2.09
CLIP1P30622 AC080078.3-201ENST00000605407 463 ntBASIC2□□□□□ -2.09
CLIP1P30622 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC2□□□□□ -2.09
CLIP1P30622 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2□□□□□ -2.09
CLIP1P30622 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CLIP1P30622 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CLIP1P30622 RNU1-93P-201ENST00000364704 169 ntBASIC1.99□□□□□ -2.09
CLIP1P30622 RPS20P15-201ENST00000412792 311 ntBASIC1.99□□□□□ -2.09
CLIP1P30622 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC1.99□□□□□ -2.09
CLIP1P30622 SDCBPP1-201ENST00000440192 890 ntBASIC1.99□□□□□ -2.09
CLIP1P30622 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.99□□□□□ -2.09
CLIP1P30622 HMGB1P26-201ENST00000452520 628 ntBASIC1.99□□□□□ -2.09
CLIP1P30622 CALM1P2-201ENST00000452941 448 ntBASIC1.99□□□□□ -2.09
CLIP1P30622 MTND3P24-201ENST00000506306 329 ntBASIC1.99□□□□□ -2.09
CLIP1P30622 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
CLIP1P30622 UBE2L4-201ENST00000587688 464 ntBASIC1.99□□□□□ -2.09
CLIP1P30622 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CLIP1P30622 DEFB109C-201ENST00000382575 264 ntBASIC1.98□□□□□ -2.09
CLIP1P30622 DEFB109B-201ENST00000382656 264 ntBASIC1.98□□□□□ -2.09
CLIP1P30622 RPS12P24-201ENST00000412619 387 ntBASIC1.98□□□□□ -2.09
CLIP1P30622 UBE2V1P5-201ENST00000440070 405 ntBASIC1.98□□□□□ -2.09
CLIP1P30622 AL139109.1-201ENST00000455491 297 ntBASIC1.98□□□□□ -2.09
CLIP1P30622 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CLIP1P30622 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.98□□□□□ -2.09
CLIP1P30622 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.98□□□□□ -2.09
CLIP1P30622 OR6C73P-201ENST00000546432 358 ntBASIC1.98□□□□□ -2.09
CLIP1P30622 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.98□□□□□ -2.09
CLIP1P30622 PSMA3P-201ENST00000555485 635 ntBASIC1.98□□□□□ -2.09
CLIP1P30622 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC1.98□□□□□ -2.09
CLIP1P30622 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CLIP1P30622 AC008568.2-201ENST00000623862 2313 ntBASIC1.98□□□□□ -2.09
CLIP1P30622 MIR3199-2-201ENST00000636243 86 ntBASIC1.98□□□□□ -2.09
CLIP1P30622 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CLIP1P30622 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
CLIP1P30622 MTND5P3-201ENST00000438536 1800 ntBASIC1.97□□□□□ -2.09
CLIP1P30622 RNY1-201ENST00000364228 113 ntBASIC1.97□□□□□ -2.09
CLIP1P30622 AC096632.1-201ENST00000427395 310 ntBASIC1.97□□□□□ -2.09
CLIP1P30622 COX6CP14-201ENST00000469580 174 ntBASIC1.97□□□□□ -2.09
CLIP1P30622 AC113155.1-201ENST00000511141 769 ntBASIC1.97□□□□□ -2.09
CLIP1P30622 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.97□□□□□ -2.09
CLIP1P30622 TRAV28-201ENST00000557548 323 ntBASIC1.97□□□□□ -2.09
CLIP1P30622 AC009090.3-201ENST00000616553 565 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms