Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.6□□□□□ -1.51
VARSP26640 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VARSP26640 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.6□□□□□ -1.51
VARSP26640 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
VARSP26640 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VARSP26640 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VARSP26640 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.6□□□□□ -1.51
VARSP26640 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.6□□□□□ -1.51
VARSP26640 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VARSP26640 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.6□□□□□ -1.51
VARSP26640 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
VARSP26640 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.6□□□□□ -1.51
VARSP26640 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.6□□□□□ -1.51
VARSP26640 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.59□□□□□ -1.51
VARSP26640 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VARSP26640 THAP12P5-201ENST00000405864 2275 ntBASIC5.59□□□□□ -1.51
VARSP26640 PRO1804-201ENST00000623780 2050 ntBASIC5.59□□□□□ -1.51
VARSP26640 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VARSP26640 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VARSP26640 RNU6-923P-201ENST00000364753 107 ntBASIC5.59□□□□□ -1.51
VARSP26640 RNU6-827P-201ENST00000365553 106 ntBASIC5.59□□□□□ -1.51
VARSP26640 Y_RNA.418-201ENST00000384029 102 ntBASIC5.59□□□□□ -1.51
VARSP26640 Y_RNA.504-201ENST00000384481 104 ntBASIC5.59□□□□□ -1.51
VARSP26640 RNA5SP91-201ENST00000390902 119 ntBASIC5.59□□□□□ -1.51
VARSP26640 SNORD78.2-201ENST00000391076 69 ntBASIC5.59□□□□□ -1.51
VARSP26640 RPL21P67-201ENST00000402896 478 ntBASIC5.59□□□□□ -1.51
VARSP26640 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.59□□□□□ -1.51
VARSP26640 PPP1R11P2-201ENST00000423543 382 ntBASIC5.59□□□□□ -1.51
VARSP26640 AC126120.1-201ENST00000431082 470 ntBASIC5.59□□□□□ -1.51
VARSP26640 AC138761.5-201ENST00000433967 325 ntBASIC5.59□□□□□ -1.51
VARSP26640 RPL36AP39-201ENST00000445859 318 ntBASIC5.59□□□□□ -1.51
VARSP26640 RPL7L1P1-201ENST00000448259 785 ntBASIC5.59□□□□□ -1.51
VARSP26640 BX276092.4-201ENST00000452056 248 ntBASIC5.59□□□□□ -1.51
VARSP26640 AC079354.2-201ENST00000453523 154 ntBASIC5.59□□□□□ -1.51
VARSP26640 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.59□□□□□ -1.51
VARSP26640 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.59□□□□□ -1.51
VARSP26640 GLUD1P3-202ENST00000508551 200 ntBASIC5.59□□□□□ -1.51
VARSP26640 Y_RNA.706-201ENST00000516933 99 ntBASIC5.59□□□□□ -1.51
VARSP26640 AC025755.1-201ENST00000521306 278 ntBASIC5.59□□□□□ -1.51
VARSP26640 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC5.59□□□□□ -1.51
VARSP26640 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.59□□□□□ -1.51
VARSP26640 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.59□□□□□ -1.51
VARSP26640 AC011921.3-201ENST00000605540 361 ntBASIC5.59□□□□□ -1.51
VARSP26640 AC091895.1-201ENST00000624494 256 ntBASIC5.59□□□□□ -1.51
VARSP26640 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC5.59□□□□□ -1.51
VARSP26640 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VARSP26640 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.59□□□□□ -1.51
VARSP26640 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
VARSP26640 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
VARSP26640 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.59□□□□□ -1.51
VARSP26640 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VARSP26640 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.59□□□□□ -1.52
VARSP26640 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
VARSP26640 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
VARSP26640 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VARSP26640 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VARSP26640 ABCC13-202ENST00000463099 3842 ntBASIC5.58□□□□□ -1.52
VARSP26640 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
VARSP26640 RNU6-326P-201ENST00000365480 107 ntBASIC5.58□□□□□ -1.52
VARSP26640 Y_RNA.497-201ENST00000384447 98 ntBASIC5.58□□□□□ -1.52
VARSP26640 RNU6-1168P-201ENST00000390831 104 ntBASIC5.58□□□□□ -1.52
VARSP26640 RNU2-61P-201ENST00000411069 191 ntBASIC5.58□□□□□ -1.52
VARSP26640 TMSB10P2-201ENST00000416049 131 ntBASIC5.58□□□□□ -1.52
VARSP26640 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC5.58□□□□□ -1.52
VARSP26640 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.58□□□□□ -1.52
VARSP26640 AP001324.2-201ENST00000461163 319 ntBASIC5.58□□□□□ -1.52
VARSP26640 RPL23AP65-201ENST00000475608 468 ntBASIC5.58□□□□□ -1.52
VARSP26640 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC5.58□□□□□ -1.52
VARSP26640 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.58□□□□□ -1.52
VARSP26640 AC074133.1-201ENST00000515696 183 ntBASIC5.58□□□□□ -1.52
VARSP26640 RNU2-31P-201ENST00000516954 155 ntBASIC5.58□□□□□ -1.52
VARSP26640 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.58□□□□□ -1.52
VARSP26640 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.58□□□□□ -1.52
VARSP26640 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.58□□□□□ -1.52
VARSP26640 AC104581.2-201ENST00000572227 430 ntBASIC5.58□□□□□ -1.52
VARSP26640 SNORD95-201ENST00000579879 68 ntBASIC5.58□□□□□ -1.52
VARSP26640 MIR4512-201ENST00000583257 77 ntBASIC5.58□□□□□ -1.52
VARSP26640 AL589674.2-201ENST00000604304 337 ntBASIC5.58□□□□□ -1.52
VARSP26640 AC037487.3-201ENST00000606668 112 ntBASIC5.58□□□□□ -1.52
VARSP26640 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.58□□□□□ -1.52
VARSP26640 AC108706.1-201ENST00000611053 297 ntBASIC5.58□□□□□ -1.52
VARSP26640 AL512624.1-201ENST00000613638 469 ntBASIC5.58□□□□□ -1.52
VARSP26640 RMST_4.1-201ENST00000616886 107 ntBASIC5.58□□□□□ -1.52
VARSP26640 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VARSP26640 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VARSP26640 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.58□□□□□ -1.52
VARSP26640 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
VARSP26640 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VARSP26640 RBBP8P1-201ENST00000449447 1844 ntBASIC5.58□□□□□ -1.52
VARSP26640 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
VARSP26640 AC100778.3-201ENST00000580060 1750 ntBASIC5.57□□□□□ -1.52
VARSP26640 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
VARSP26640 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
VARSP26640 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
VARSP26640 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
VARSP26640 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VARSP26640 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
VARSP26640 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
VARSP26640 RNU1-150P-201ENST00000362491 162 ntBASIC5.57□□□□□ -1.52
VARSP26640 U3.6-201ENST00000363622 211 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms