Protein–RNA interactions for Protein: P25940

COL5A3, Collagen alpha-3(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3P25940 AC098483.2-201ENST00000603158 454 ntBASIC2.03□□□□□ -2.09
COL5A3P25940 RPL21P136-201ENST00000605378 396 ntBASIC2.03□□□□□ -2.09
COL5A3P25940 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC2.03□□□□□ -2.09
COL5A3P25940 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
COL5A3P25940 AL391987.6-201ENST00000305671 199 ntBASIC2.02□□□□□ -2.09
COL5A3P25940 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
COL5A3P25940 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
COL5A3P25940 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
COL5A3P25940 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC2.02□□□□□ -2.09
COL5A3P25940 DNAJC19P6-201ENST00000401853 280 ntBASIC2.02□□□□□ -2.09
COL5A3P25940 RNU4-27P-201ENST00000410889 139 ntBASIC2.02□□□□□ -2.09
COL5A3P25940 AC007000.2-201ENST00000442564 487 ntBASIC2.02□□□□□ -2.09
COL5A3P25940 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC2.02□□□□□ -2.09
COL5A3P25940 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC2.02□□□□□ -2.09
COL5A3P25940 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC2.02□□□□□ -2.09
COL5A3P25940 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.02□□□□□ -2.09
COL5A3P25940 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC2.02□□□□□ -2.09
COL5A3P25940 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
COL5A3P25940 RN7SKP40-201ENST00000517211 242 ntBASIC2.02□□□□□ -2.09
COL5A3P25940 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
COL5A3P25940 CENPUP2-201ENST00000555897 1186 ntBASIC2.02□□□□□ -2.09
COL5A3P25940 MTND4LP25-201ENST00000570218 163 ntBASIC2.02□□□□□ -2.09
COL5A3P25940 AC098848.2-201ENST00000588023 330 ntBASIC2.02□□□□□ -2.09
COL5A3P25940 AC115085.1-201ENST00000588924 229 ntBASIC2.02□□□□□ -2.09
COL5A3P25940 AL158211.2-201ENST00000607282 395 ntBASIC2.02□□□□□ -2.09
COL5A3P25940 AC126118.1-201ENST00000607744 628 ntBASIC2.02□□□□□ -2.09
COL5A3P25940 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC2.02□□□□□ -2.09
COL5A3P25940 AL136164.4-201ENST00000625013 2135 ntBASIC2.02□□□□□ -2.09
COL5A3P25940 AC095038.3-201ENST00000634439 195 ntBASIC2.02□□□□□ -2.09
COL5A3P25940 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.01□□□□□ -2.09
COL5A3P25940 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.01□□□□□ -2.09
COL5A3P25940 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
COL5A3P25940 RNU6-252P-201ENST00000363232 107 ntBASIC2.01□□□□□ -2.09
COL5A3P25940 SNORD114-26-201ENST00000363543 72 ntBASIC2.01□□□□□ -2.09
COL5A3P25940 SNORD48-201ENST00000364953 64 ntBASIC2.01□□□□□ -2.09
COL5A3P25940 MTND1P23-201ENST00000416931 372 ntBASIC2.01□□□□□ -2.09
COL5A3P25940 RPS3AP9-201ENST00000417027 792 ntBASIC2.01□□□□□ -2.09
COL5A3P25940 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC2.01□□□□□ -2.09
COL5A3P25940 AC114973.1-201ENST00000429057 632 ntBASIC2.01□□□□□ -2.09
COL5A3P25940 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.01□□□□□ -2.09
COL5A3P25940 TRIM60P3Y-201ENST00000432201 673 ntBASIC2.01□□□□□ -2.09
COL5A3P25940 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.01□□□□□ -2.09
COL5A3P25940 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
COL5A3P25940 AC080013.2-201ENST00000460866 323 ntBASIC2.01□□□□□ -2.09
COL5A3P25940 MTND3P24-201ENST00000506306 329 ntBASIC2.01□□□□□ -2.09
COL5A3P25940 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
COL5A3P25940 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.01□□□□□ -2.09
COL5A3P25940 MTND1P36-201ENST00000522384 936 ntBASIC2.01□□□□□ -2.09
COL5A3P25940 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC2.01□□□□□ -2.09
COL5A3P25940 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC2.01□□□□□ -2.09
COL5A3P25940 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC2.01□□□□□ -2.09
COL5A3P25940 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.01□□□□□ -2.09
COL5A3P25940 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.01□□□□□ -2.09
COL5A3P25940 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC2.01□□□□□ -2.09
COL5A3P25940 CBX3P2-202ENST00000583365 535 ntBASIC2.01□□□□□ -2.09
COL5A3P25940 AC026741.1-201ENST00000605892 482 ntBASIC2.01□□□□□ -2.09
COL5A3P25940 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC2.01□□□□□ -2.09
COL5A3P25940 AC097460.3-201ENST00000623099 442 ntBASIC2.01□□□□□ -2.09
COL5A3P25940 AP002371.2-201ENST00000624450 503 ntBASIC2.01□□□□□ -2.09
COL5A3P25940 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC2.01□□□□□ -2.09
COL5A3P25940 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
COL5A3P25940 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC2□□□□□ -2.09
COL5A3P25940 RNU6-1005P-201ENST00000384519 107 ntBASIC2□□□□□ -2.09
COL5A3P25940 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2□□□□□ -2.09
COL5A3P25940 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC2□□□□□ -2.09
COL5A3P25940 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC2□□□□□ -2.09
COL5A3P25940 AC108729.2-201ENST00000476543 840 ntBASIC2□□□□□ -2.09
COL5A3P25940 RPS15AP36-201ENST00000492022 382 ntBASIC2□□□□□ -2.09
COL5A3P25940 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2□□□□□ -2.09
COL5A3P25940 IGLV3-17-201ENST00000519099 244 ntBASIC2□□□□□ -2.09
COL5A3P25940 AC087441.2-201ENST00000529141 262 ntBASIC2□□□□□ -2.09
COL5A3P25940 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2□□□□□ -2.09
COL5A3P25940 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2□□□□□ -2.09
COL5A3P25940 SYF2P1-201ENST00000550658 413 ntBASIC2□□□□□ -2.09
COL5A3P25940 AP001180.3-201ENST00000582221 145 ntBASIC2□□□□□ -2.09
COL5A3P25940 AC091057.2-201ENST00000602594 792 ntBASIC2□□□□□ -2.09
COL5A3P25940 AC011374.2-201ENST00000607135 526 ntBASIC2□□□□□ -2.09
COL5A3P25940 AC092574.1-201ENST00000609771 420 ntBASIC2□□□□□ -2.09
COL5A3P25940 AP000943.4-201ENST00000622912 357 ntBASIC2□□□□□ -2.09
COL5A3P25940 AL138960.2-201ENST00000625145 535 ntBASIC2□□□□□ -2.09
COL5A3P25940 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2□□□□□ -2.09
COL5A3P25940 PSMD5-AS1-215ENST00000640622 205 ntBASIC2□□□□□ -2.09
COL5A3P25940 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC2□□□□□ -2.09
COL5A3P25940 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2□□□□□ -2.09
COL5A3P25940 SNORA7.1-201ENST00000363750 139 ntBASIC2□□□□□ -2.09
COL5A3P25940 RNU6-98P-201ENST00000384173 107 ntBASIC2□□□□□ -2.09
COL5A3P25940 SSXP9-201ENST00000417503 292 ntBASIC2□□□□□ -2.09
COL5A3P25940 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC2□□□□□ -2.09
COL5A3P25940 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC2□□□□□ -2.09
COL5A3P25940 AP000949.1-201ENST00000438328 629 ntBASIC2□□□□□ -2.09
COL5A3P25940 PIGFP3-201ENST00000441918 722 ntBASIC2□□□□□ -2.09
COL5A3P25940 ZNF736P6Y-201ENST00000447526 1213 ntBASIC2□□□□□ -2.09
COL5A3P25940 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2□□□□□ -2.09
COL5A3P25940 AC135721.1-201ENST00000497954 479 ntBASIC2□□□□□ -2.09
COL5A3P25940 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2□□□□□ -2.09
COL5A3P25940 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2□□□□□ -2.09
COL5A3P25940 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC2□□□□□ -2.09
COL5A3P25940 C1DP5-201ENST00000525775 383 ntBASIC2□□□□□ -2.09
COL5A3P25940 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC2□□□□□ -2.09
COL5A3P25940 AC090079.2-201ENST00000575289 768 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms