Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
CD44P16070 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CD44P16070 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
CD44P16070 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CD44P16070 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC6.77□□□□□ -1.33
CD44P16070 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC6.77□□□□□ -1.33
CD44P16070 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
CD44P16070 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CD44P16070 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CD44P16070 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
CD44P16070 AL359693.1-201ENST00000614959 2407 ntBASIC6.76□□□□□ -1.33
CD44P16070 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CD44P16070 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
CD44P16070 Y_RNA.17-201ENST00000362433 111 ntBASIC6.76□□□□□ -1.33
CD44P16070 RNA5SP110-201ENST00000362638 115 ntBASIC6.76□□□□□ -1.33
CD44P16070 RNU6-105P-201ENST00000363909 104 ntBASIC6.76□□□□□ -1.33
CD44P16070 RNU6-309P-201ENST00000364573 106 ntBASIC6.76□□□□□ -1.33
CD44P16070 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.76□□□□□ -1.33
CD44P16070 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CD44P16070 POU5F1P5-201ENST00000445059 658 ntBASIC6.76□□□□□ -1.33
CD44P16070 AL162739.1-201ENST00000450606 307 ntBASIC6.76□□□□□ -1.33
CD44P16070 RPL23AP24-201ENST00000458203 385 ntBASIC6.76□□□□□ -1.33
CD44P16070 AC087588.1-201ENST00000462203 316 ntBASIC6.76□□□□□ -1.33
CD44P16070 AC010531.2-201ENST00000465012 153 ntBASIC6.76□□□□□ -1.33
CD44P16070 RNU6-857P-201ENST00000515893 110 ntBASIC6.76□□□□□ -1.33
CD44P16070 CYCSP25-201ENST00000525280 316 ntBASIC6.76□□□□□ -1.33
CD44P16070 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC6.76□□□□□ -1.33
CD44P16070 MIR4724-201ENST00000579485 89 ntBASIC6.76□□□□□ -1.33
CD44P16070 SNORA74.4-201ENST00000607595 199 ntBASIC6.76□□□□□ -1.33
CD44P16070 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.76□□□□□ -1.33
CD44P16070 MIR3674-201ENST00000636576 68 ntBASIC6.76□□□□□ -1.33
CD44P16070 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.76□□□□□ -1.33
CD44P16070 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.76□□□□□ -1.33
CD44P16070 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
CD44P16070 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CD44P16070 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CD44P16070 OR5M2P-202ENST00000641241 4242 ntBASIC6.75□□□□□ -1.33
CD44P16070 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.75□□□□□ -1.33
CD44P16070 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CD44P16070 OFD1P17-201ENST00000437639 3018 ntBASIC6.75□□□□□ -1.33
CD44P16070 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CD44P16070 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CD44P16070 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CD44P16070 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.75□□□□□ -1.33
CD44P16070 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
CD44P16070 RNU6-78P-201ENST00000362897 107 ntBASIC6.75□□□□□ -1.33
CD44P16070 SNORD45.3-201ENST00000363836 72 ntBASIC6.75□□□□□ -1.33
CD44P16070 MIR34A-201ENST00000385130 110 ntBASIC6.75□□□□□ -1.33
CD44P16070 CBX3P9-201ENST00000402326 552 ntBASIC6.75□□□□□ -1.33
CD44P16070 AC074117.2-201ENST00000417130 397 ntBASIC6.75□□□□□ -1.33
CD44P16070 TOMM22P4-201ENST00000511318 336 ntBASIC6.75□□□□□ -1.33
CD44P16070 AC091874.1-201ENST00000511402 339 ntBASIC6.75□□□□□ -1.33
CD44P16070 RNU2-12P-201ENST00000517216 168 ntBASIC6.75□□□□□ -1.33
CD44P16070 AC051619.2-201ENST00000559063 397 ntBASIC6.75□□□□□ -1.33
CD44P16070 AC136624.4-201ENST00000573044 370 ntBASIC6.75□□□□□ -1.33
CD44P16070 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC6.75□□□□□ -1.33
CD44P16070 MIR6823-201ENST00000622118 61 ntBASIC6.75□□□□□ -1.33
CD44P16070 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.75□□□□□ -1.33
CD44P16070 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CD44P16070 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC6.75□□□□□ -1.33
CD44P16070 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CD44P16070 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.75□□□□□ -1.33
CD44P16070 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.75□□□□□ -1.33
CD44P16070 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC6.75□□□□□ -1.33
CD44P16070 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CD44P16070 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
CD44P16070 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.74□□□□□ -1.33
CD44P16070 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
CD44P16070 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CD44P16070 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.74□□□□□ -1.33
CD44P16070 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.74□□□□□ -1.33
CD44P16070 AC022325.1-201ENST00000502748 2199 ntBASIC6.74□□□□□ -1.33
CD44P16070 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.74□□□□□ -1.33
CD44P16070 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CD44P16070 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CD44P16070 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CD44P16070 Y_RNA.49-201ENST00000362714 112 ntBASIC6.74□□□□□ -1.33
CD44P16070 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CD44P16070 RNA5SP44-201ENST00000410446 133 ntBASIC6.74□□□□□ -1.33
CD44P16070 RN7SKP53-201ENST00000411337 315 ntBASIC6.74□□□□□ -1.33
CD44P16070 AC096649.2-201ENST00000416186 393 ntBASIC6.74□□□□□ -1.33
CD44P16070 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.74□□□□□ -1.33
CD44P16070 AC013403.1-201ENST00000436954 263 ntBASIC6.74□□□□□ -1.33
CD44P16070 RNU6-1218P-201ENST00000458990 108 ntBASIC6.74□□□□□ -1.33
CD44P16070 UTP23-205ENST00000520733 369 ntTSL 3 BASIC6.74□□□□□ -1.33
CD44P16070 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC6.74□□□□□ -1.33
CD44P16070 AC090022.1-201ENST00000546569 311 ntBASIC6.74□□□□□ -1.33
CD44P16070 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC6.74□□□□□ -1.33
CD44P16070 RPSAP75-201ENST00000605848 301 ntBASIC6.74□□□□□ -1.33
CD44P16070 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.74□□□□□ -1.33
CD44P16070 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
CD44P16070 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CD44P16070 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.74□□□□□ -1.33
CD44P16070 AL359955.1-201ENST00000455242 3275 ntBASIC6.74□□□□□ -1.33
CD44P16070 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
CD44P16070 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
CD44P16070 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.74□□□□□ -1.33
CD44P16070 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
CD44P16070 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CD44P16070 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms