Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 SNRPEP2-201ENST00000397592 279 ntBASIC2.67□□□□□ -1.98
RETP07949 RPS4XP3-201ENST00000398541 413 ntBASIC2.67□□□□□ -1.98
RETP07949 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
RETP07949 RNU2-42P-201ENST00000410697 113 ntBASIC2.67□□□□□ -1.98
RETP07949 AC009963.1-201ENST00000417265 157 ntBASIC2.67□□□□□ -1.98
RETP07949 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.67□□□□□ -1.98
RETP07949 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.67□□□□□ -1.98
RETP07949 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.67□□□□□ -1.98
RETP07949 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.67□□□□□ -1.98
RETP07949 VN1R10P-201ENST00000447106 875 ntBASIC2.67□□□□□ -1.98
RETP07949 MTND2P19-201ENST00000449129 1012 ntBASIC2.67□□□□□ -1.98
RETP07949 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC2.67□□□□□ -1.98
RETP07949 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
RETP07949 AC113420.1-201ENST00000507903 571 ntBASIC2.67□□□□□ -1.98
RETP07949 RNU6-991P-201ENST00000516168 107 ntBASIC2.67□□□□□ -1.98
RETP07949 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.67□□□□□ -1.98
RETP07949 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.67□□□□□ -1.98
RETP07949 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
RETP07949 EEF1B2P4-201ENST00000551398 348 ntBASIC2.67□□□□□ -1.98
RETP07949 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.67□□□□□ -1.98
RETP07949 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.67□□□□□ -1.98
RETP07949 AC009063.1-201ENST00000563342 702 ntBASIC2.67□□□□□ -1.98
RETP07949 MTND1P8-201ENST00000571424 950 ntBASIC2.67□□□□□ -1.98
RETP07949 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.67□□□□□ -1.98
RETP07949 RPP40P2-201ENST00000603596 712 ntBASIC2.67□□□□□ -1.98
RETP07949 AL160237.3-201ENST00000604114 1013 ntBASIC2.67□□□□□ -1.98
RETP07949 AC009237.15-201ENST00000610252 501 ntBASIC2.67□□□□□ -1.98
RETP07949 AL158163.2-201ENST00000619110 700 ntBASIC2.67□□□□□ -1.98
RETP07949 CR381653.2-201ENST00000624041 768 ntBASIC2.67□□□□□ -1.98
RETP07949 AC026634.1-201ENST00000634369 198 ntBASIC2.67□□□□□ -1.98
RETP07949 MTCO1P9-201ENST00000505577 1534 ntBASIC2.67□□□□□ -1.98
RETP07949 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.66□□□□□ -1.98
RETP07949 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.66□□□□□ -1.98
RETP07949 AC135776.4-201ENST00000624300 1904 ntBASIC2.66□□□□□ -1.98
RETP07949 Z99496.1-201ENST00000469424 1477 ntBASIC2.66□□□□□ -1.98
RETP07949 AC011460.1-201ENST00000636268 1834 ntBASIC2.66□□□□□ -1.98
RETP07949 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.66□□□□□ -1.98
RETP07949 AP000526.1-201ENST00000603308 1388 ntBASIC2.66□□□□□ -1.98
RETP07949 RNU6-1074P-201ENST00000383995 104 ntBASIC2.66□□□□□ -1.98
RETP07949 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.66□□□□□ -1.98
RETP07949 LUZP4P1-201ENST00000415420 344 ntBASIC2.66□□□□□ -1.98
RETP07949 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC2.66□□□□□ -1.98
RETP07949 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.66□□□□□ -1.98
RETP07949 AC099677.1-201ENST00000420575 175 ntBASIC2.66□□□□□ -1.98
RETP07949 RPL36AP6-201ENST00000435770 321 ntBASIC2.66□□□□□ -1.98
RETP07949 AC129850.1-201ENST00000436203 508 ntBASIC2.66□□□□□ -1.98
RETP07949 AL513043.1-201ENST00000439124 535 ntBASIC2.66□□□□□ -1.98
RETP07949 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
RETP07949 AL353705.4-201ENST00000449661 238 ntBASIC2.66□□□□□ -1.98
RETP07949 AC027673.1-201ENST00000456245 405 ntBASIC2.66□□□□□ -1.98
RETP07949 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.66□□□□□ -1.98
RETP07949 AC003982.1-202ENST00000469928 248 ntBASIC2.66□□□□□ -1.98
RETP07949 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.66□□□□□ -1.98
RETP07949 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.66□□□□□ -1.98
RETP07949 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.66□□□□□ -1.98
RETP07949 RPL37P25-201ENST00000507308 276 ntBASIC2.66□□□□□ -1.98
RETP07949 AC006390.1-201ENST00000508068 283 ntBASIC2.66□□□□□ -1.98
RETP07949 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC2.66□□□□□ -1.98
RETP07949 AC008716.1-201ENST00000511084 513 ntBASIC2.66□□□□□ -1.98
RETP07949 Y_RNA.673-201ENST00000516306 88 ntBASIC2.66□□□□□ -1.98
RETP07949 SNRPGP16-201ENST00000533275 226 ntBASIC2.66□□□□□ -1.98
RETP07949 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.66□□□□□ -1.98
RETP07949 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
RETP07949 AC018630.1-201ENST00000541376 925 ntBASIC2.66□□□□□ -1.98
RETP07949 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.66□□□□□ -1.98
RETP07949 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.66□□□□□ -1.98
RETP07949 AL049838.1-201ENST00000563647 981 ntBASIC2.66□□□□□ -1.98
RETP07949 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.66□□□□□ -1.98
RETP07949 MIR5194-201ENST00000582634 120 ntBASIC2.66□□□□□ -1.98
RETP07949 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.66□□□□□ -1.98
RETP07949 U73023.1-201ENST00000603134 700 ntBASIC2.66□□□□□ -1.98
RETP07949 AC008277.2-201ENST00000605196 797 ntBASIC2.66□□□□□ -1.98
RETP07949 AL157392.4-201ENST00000609756 345 ntBASIC2.66□□□□□ -1.98
RETP07949 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.66□□□□□ -1.98
RETP07949 AC010975.3-201ENST00000618727 978 ntBASIC2.66□□□□□ -1.98
RETP07949 OR1S1-201ENST00000624470 978 ntBASIC2.66□□□□□ -1.98
RETP07949 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.66□□□□□ -1.98
RETP07949 MFSD8-245ENST00000641743 948 ntBASIC2.66□□□□□ -1.98
RETP07949 TAB3P1-202ENST00000452645 1634 ntBASIC2.66□□□□□ -1.98
RETP07949 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
RETP07949 MTCO1P23-201ENST00000415223 1526 ntBASIC2.66□□□□□ -1.98
RETP07949 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
RETP07949 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.66□□□□□ -1.98
RETP07949 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
RETP07949 AC092593.1-201ENST00000515413 1815 ntBASIC2.65□□□□□ -1.98
RETP07949 DBF4P1-201ENST00000412976 1892 ntBASIC2.65□□□□□ -1.98
RETP07949 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
RETP07949 Y_RNA.238-201ENST00000364441 102 ntBASIC2.65□□□□□ -1.99
RETP07949 Y_RNA.408-201ENST00000383987 102 ntBASIC2.65□□□□□ -1.99
RETP07949 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
RETP07949 AL512633.1-201ENST00000399931 655 ntBASIC2.65□□□□□ -1.99
RETP07949 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.65□□□□□ -1.99
RETP07949 AL161449.1-201ENST00000414531 1199 ntBASIC2.65□□□□□ -1.99
RETP07949 PSMA6P3-201ENST00000428242 164 ntBASIC2.65□□□□□ -1.99
RETP07949 MTCO1P3-201ENST00000429327 192 ntBASIC2.65□□□□□ -1.99
RETP07949 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.65□□□□□ -1.99
RETP07949 AL139415.2-201ENST00000431968 163 ntBASIC2.65□□□□□ -1.99
RETP07949 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.65□□□□□ -1.99
RETP07949 OR10R1P-201ENST00000441524 1141 ntBASIC2.65□□□□□ -1.99
RETP07949 AL606517.1-201ENST00000446914 387 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms