Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.1□□□□□ -1.91
CLDN1O95832 CDC42P4-201ENST00000510507 563 ntBASIC3.1□□□□□ -1.91
CLDN1O95832 AF131216.2-201ENST00000512316 564 ntBASIC3.1□□□□□ -1.91
CLDN1O95832 IGKV2-26-201ENST00000518305 343 ntBASIC3.1□□□□□ -1.91
CLDN1O95832 MTCYBP20-201ENST00000524239 1129 ntBASIC3.1□□□□□ -1.91
CLDN1O95832 OR5D17P-201ENST00000531492 978 ntBASIC3.1□□□□□ -1.91
CLDN1O95832 AP002453.2-201ENST00000533503 320 ntBASIC3.1□□□□□ -1.91
CLDN1O95832 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.1□□□□□ -1.91
CLDN1O95832 AL391156.1-201ENST00000554965 554 ntBASIC3.1□□□□□ -1.91
CLDN1O95832 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.1□□□□□ -1.91
CLDN1O95832 AC009977.1-201ENST00000586015 570 ntBASIC3.1□□□□□ -1.91
CLDN1O95832 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.1□□□□□ -1.91
CLDN1O95832 SEPT7P9-203ENST00000604116 343 ntBASIC3.1□□□□□ -1.91
CLDN1O95832 AL359999.1-201ENST00000604513 294 ntBASIC3.1□□□□□ -1.91
CLDN1O95832 Z99129.1-201ENST00000612510 255 ntBASIC3.1□□□□□ -1.91
CLDN1O95832 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.1□□□□□ -1.91
CLDN1O95832 AP001506.1-201ENST00000615444 211 ntBASIC3.1□□□□□ -1.91
CLDN1O95832 U73479.1-201ENST00000618062 168 ntBASIC3.1□□□□□ -1.91
CLDN1O95832 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.1□□□□□ -1.91
CLDN1O95832 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CLDN1O95832 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLDN1O95832 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CLDN1O95832 MTND4P5-201ENST00000435821 1374 ntBASIC3.1□□□□□ -1.91
CLDN1O95832 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CLDN1O95832 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CLDN1O95832 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CLDN1O95832 AC244517.1-201ENST00000606030 2086 ntBASIC3.09□□□□□ -1.91
CLDN1O95832 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CLDN1O95832 SNORA31-201ENST00000362607 130 ntBASIC3.09□□□□□ -1.91
CLDN1O95832 RNU6-97P-201ENST00000363387 104 ntBASIC3.09□□□□□ -1.91
CLDN1O95832 RNU6-263P-201ENST00000363811 107 ntBASIC3.09□□□□□ -1.91
CLDN1O95832 RNA5SP189-201ENST00000364920 115 ntBASIC3.09□□□□□ -1.91
CLDN1O95832 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CLDN1O95832 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.91
CLDN1O95832 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CLDN1O95832 U3.20-201ENST00000390909 217 ntBASIC3.09□□□□□ -1.91
CLDN1O95832 RNU6-837P-201ENST00000391056 108 ntBASIC3.09□□□□□ -1.91
CLDN1O95832 AL359704.1-201ENST00000411586 781 ntBASIC3.09□□□□□ -1.91
CLDN1O95832 AC078974.1-201ENST00000411597 223 ntBASIC3.09□□□□□ -1.91
CLDN1O95832 RPS3AP3-201ENST00000411933 242 ntBASIC3.09□□□□□ -1.91
CLDN1O95832 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.09□□□□□ -1.91
CLDN1O95832 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.09□□□□□ -1.91
CLDN1O95832 AL158071.1-201ENST00000430315 461 ntBASIC3.09□□□□□ -1.91
CLDN1O95832 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.09□□□□□ -1.91
CLDN1O95832 DNAJC19P4-201ENST00000440115 345 ntBASIC3.09□□□□□ -1.91
CLDN1O95832 AL049734.2-201ENST00000441066 616 ntBASIC3.09□□□□□ -1.91
CLDN1O95832 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.09□□□□□ -1.91
CLDN1O95832 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.09□□□□□ -1.91
CLDN1O95832 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.09□□□□□ -1.91
CLDN1O95832 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.09□□□□□ -1.91
CLDN1O95832 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.09□□□□□ -1.91
CLDN1O95832 snoU109.1-201ENST00000459339 135 ntBASIC3.09□□□□□ -1.91
CLDN1O95832 AC017037.2-201ENST00000513850 890 ntBASIC3.09□□□□□ -1.91
CLDN1O95832 OR4R3P-201ENST00000525084 838 ntBASIC3.09□□□□□ -1.91
CLDN1O95832 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.09□□□□□ -1.91
CLDN1O95832 RPL21P5-201ENST00000554662 472 ntBASIC3.09□□□□□ -1.91
CLDN1O95832 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.09□□□□□ -1.91
CLDN1O95832 AL121576.1-201ENST00000556055 276 ntBASIC3.09□□□□□ -1.91
CLDN1O95832 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.09□□□□□ -1.91
CLDN1O95832 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.09□□□□□ -1.91
CLDN1O95832 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.09□□□□□ -1.91
CLDN1O95832 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.09□□□□□ -1.91
CLDN1O95832 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC3.09□□□□□ -1.91
CLDN1O95832 AC010928.3-201ENST00000587712 541 ntBASIC3.09□□□□□ -1.91
CLDN1O95832 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.09□□□□□ -1.91
CLDN1O95832 IGHV3-29-201ENST00000604817 344 ntBASIC3.09□□□□□ -1.91
CLDN1O95832 AL139286.2-201ENST00000606838 396 ntBASIC3.09□□□□□ -1.91
CLDN1O95832 AC138932.5-201ENST00000617759 563 ntBASIC3.09□□□□□ -1.91
CLDN1O95832 AC012150.2-201ENST00000621300 544 ntBASIC3.09□□□□□ -1.91
CLDN1O95832 AL356585.4-201ENST00000623078 1229 ntBASIC3.09□□□□□ -1.91
CLDN1O95832 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
CLDN1O95832 AL157700.1-201ENST00000561973 1432 ntBASIC3.09□□□□□ -1.92
CLDN1O95832 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
CLDN1O95832 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CLDN1O95832 AL645937.1-201ENST00000641739 1652 ntBASIC3.08□□□□□ -1.92
CLDN1O95832 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.08□□□□□ -1.92
CLDN1O95832 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CLDN1O95832 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.08□□□□□ -1.92
CLDN1O95832 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CLDN1O95832 FTLP6-201ENST00000355274 422 ntBASIC3.08□□□□□ -1.92
CLDN1O95832 AL391417.1-201ENST00000404100 426 ntBASIC3.08□□□□□ -1.92
CLDN1O95832 HSPE1P26-201ENST00000405341 275 ntBASIC3.08□□□□□ -1.92
CLDN1O95832 AL583834.1-201ENST00000406943 343 ntBASIC3.08□□□□□ -1.92
CLDN1O95832 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.08□□□□□ -1.92
CLDN1O95832 AC009961.2-201ENST00000435771 251 ntBASIC3.08□□□□□ -1.92
CLDN1O95832 AC244505.5-201ENST00000443639 207 ntBASIC3.08□□□□□ -1.92
CLDN1O95832 MTND1P27-201ENST00000451117 902 ntBASIC3.08□□□□□ -1.92
CLDN1O95832 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.08□□□□□ -1.92
CLDN1O95832 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.08□□□□□ -1.92
CLDN1O95832 MTND1P9-201ENST00000453775 944 ntBASIC3.08□□□□□ -1.92
CLDN1O95832 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.08□□□□□ -1.92
CLDN1O95832 RNU6-1231P-201ENST00000517185 103 ntBASIC3.08□□□□□ -1.92
CLDN1O95832 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.08□□□□□ -1.92
CLDN1O95832 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.08□□□□□ -1.92
CLDN1O95832 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.08□□□□□ -1.92
CLDN1O95832 SETP2-201ENST00000553886 926 ntBASIC3.08□□□□□ -1.92
CLDN1O95832 AC034268.2-201ENST00000571784 482 ntBASIC3.08□□□□□ -1.92
CLDN1O95832 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.08□□□□□ -1.92
CLDN1O95832 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.08□□□□□ -1.92
CLDN1O95832 AC091805.2-201ENST00000603848 235 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms