Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC5.25□□□□□ -1.57
PRPF40AO75400 MTATP6P4-201ENST00000427725 675 ntBASIC5.25□□□□□ -1.57
PRPF40AO75400 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC5.25□□□□□ -1.57
PRPF40AO75400 AL591212.2-201ENST00000433923 257 ntBASIC5.25□□□□□ -1.57
PRPF40AO75400 HLA-N-201ENST00000437516 135 ntBASIC5.25□□□□□ -1.57
PRPF40AO75400 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.25□□□□□ -1.57
PRPF40AO75400 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.25□□□□□ -1.57
PRPF40AO75400 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PRPF40AO75400 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.25□□□□□ -1.57
PRPF40AO75400 RPS5P7-201ENST00000456664 608 ntBASIC5.25□□□□□ -1.57
PRPF40AO75400 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC5.25□□□□□ -1.57
PRPF40AO75400 RPL7P43-201ENST00000478876 753 ntBASIC5.25□□□□□ -1.57
PRPF40AO75400 MLLT10P2-201ENST00000506434 249 ntBASIC5.25□□□□□ -1.57
PRPF40AO75400 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC5.25□□□□□ -1.57
PRPF40AO75400 OR7H2P-201ENST00000513483 306 ntBASIC5.25□□□□□ -1.57
PRPF40AO75400 AC015795.1-201ENST00000513669 327 ntBASIC5.25□□□□□ -1.57
PRPF40AO75400 RN7SKP24-201ENST00000515888 284 ntBASIC5.25□□□□□ -1.57
PRPF40AO75400 RNA5SP360-201ENST00000516555 118 ntBASIC5.25□□□□□ -1.57
PRPF40AO75400 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.25□□□□□ -1.57
PRPF40AO75400 MIR3941-201ENST00000582572 103 ntBASIC5.25□□□□□ -1.57
PRPF40AO75400 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.25□□□□□ -1.57
PRPF40AO75400 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
PRPF40AO75400 AL359757.2-201ENST00000624309 274 ntBASIC5.25□□□□□ -1.57
PRPF40AO75400 AC068254.2-201ENST00000623938 3577 ntBASIC5.25□□□□□ -1.57
PRPF40AO75400 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PRPF40AO75400 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
PRPF40AO75400 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PRPF40AO75400 PRO1804-201ENST00000623780 2050 ntBASIC5.25□□□□□ -1.57
PRPF40AO75400 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PRPF40AO75400 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.24□□□□□ -1.57
PRPF40AO75400 SDAD1P1-202ENST00000524156 2051 ntBASIC5.24□□□□□ -1.57
PRPF40AO75400 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
PRPF40AO75400 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC5.24□□□□□ -1.57
PRPF40AO75400 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.24□□□□□ -1.57
PRPF40AO75400 RNU1-15P-201ENST00000353977 144 ntBASIC5.24□□□□□ -1.57
PRPF40AO75400 RNU6-43P-201ENST00000384302 107 ntBASIC5.24□□□□□ -1.57
PRPF40AO75400 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
PRPF40AO75400 SNORA16.2-201ENST00000390991 127 ntBASIC5.24□□□□□ -1.57
PRPF40AO75400 RNY4P36-201ENST00000391116 96 ntBASIC5.24□□□□□ -1.57
PRPF40AO75400 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
PRPF40AO75400 HSPE1P8-201ENST00000406997 288 ntBASIC5.24□□□□□ -1.57
PRPF40AO75400 FAR2P4-202ENST00000425399 584 ntBASIC5.24□□□□□ -1.57
PRPF40AO75400 RPS3AP52-201ENST00000435639 297 ntBASIC5.24□□□□□ -1.57
PRPF40AO75400 RPL26P6-201ENST00000440913 438 ntBASIC5.24□□□□□ -1.57
PRPF40AO75400 AC011753.3-201ENST00000443436 406 ntBASIC5.24□□□□□ -1.57
PRPF40AO75400 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC5.24□□□□□ -1.57
PRPF40AO75400 RNU7-167P-201ENST00000459160 62 ntBASIC5.24□□□□□ -1.57
PRPF40AO75400 AC010469.1-201ENST00000463864 576 ntBASIC5.24□□□□□ -1.57
PRPF40AO75400 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.24□□□□□ -1.57
PRPF40AO75400 AP002812.1-201ENST00000495378 474 ntBASIC5.24□□□□□ -1.57
PRPF40AO75400 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.24□□□□□ -1.57
PRPF40AO75400 Y_RNA.718-201ENST00000517110 102 ntBASIC5.24□□□□□ -1.57
PRPF40AO75400 RNA5SP454-201ENST00000517231 127 ntBASIC5.24□□□□□ -1.57
PRPF40AO75400 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC5.24□□□□□ -1.57
PRPF40AO75400 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.24□□□□□ -1.57
PRPF40AO75400 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.24□□□□□ -1.57
PRPF40AO75400 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC5.24□□□□□ -1.57
PRPF40AO75400 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.24□□□□□ -1.57
PRPF40AO75400 AL355836.1-201ENST00000555951 870 ntBASIC5.24□□□□□ -1.57
PRPF40AO75400 AC007151.1-201ENST00000572774 483 ntBASIC5.24□□□□□ -1.57
PRPF40AO75400 RN7SL652P-201ENST00000577769 300 ntBASIC5.24□□□□□ -1.57
PRPF40AO75400 AC138761.3-201ENST00000579993 334 ntBASIC5.24□□□□□ -1.57
PRPF40AO75400 MIR3672-201ENST00000584290 82 ntBASIC5.24□□□□□ -1.57
PRPF40AO75400 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.24□□□□□ -1.57
PRPF40AO75400 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
PRPF40AO75400 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.24□□□□□ -1.57
PRPF40AO75400 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
PRPF40AO75400 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PRPF40AO75400 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
PRPF40AO75400 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
PRPF40AO75400 AC009812.4-201ENST00000569134 1805 ntBASIC5.23□□□□□ -1.57
PRPF40AO75400 AC004925.1-201ENST00000624256 2706 ntBASIC5.23□□□□□ -1.57
PRPF40AO75400 OR14L1P-202ENST00000641545 3009 ntBASIC5.23□□□□□ -1.57
PRPF40AO75400 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PRPF40AO75400 U3.15-201ENST00000365398 212 ntBASIC5.23□□□□□ -1.57
PRPF40AO75400 Y_RNA.399-201ENST00000383955 105 ntBASIC5.23□□□□□ -1.57
PRPF40AO75400 RNA5SP87-201ENST00000384155 118 ntBASIC5.23□□□□□ -1.57
PRPF40AO75400 AC097374.1-203ENST00000400783 485 ntBASIC5.23□□□□□ -1.57
PRPF40AO75400 MIR450B-201ENST00000401182 78 ntBASIC5.23□□□□□ -1.57
PRPF40AO75400 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PRPF40AO75400 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC5.23□□□□□ -1.57
PRPF40AO75400 RN7SKP158-201ENST00000410453 326 ntBASIC5.23□□□□□ -1.57
PRPF40AO75400 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.23□□□□□ -1.57
PRPF40AO75400 AC079780.1-201ENST00000428259 207 ntBASIC5.23□□□□□ -1.57
PRPF40AO75400 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC5.23□□□□□ -1.57
PRPF40AO75400 AL162388.1-201ENST00000450912 352 ntBASIC5.23□□□□□ -1.57
PRPF40AO75400 RPL23AP2-201ENST00000471227 466 ntBASIC5.23□□□□□ -1.57
PRPF40AO75400 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC5.23□□□□□ -1.57
PRPF40AO75400 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.23□□□□□ -1.57
PRPF40AO75400 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PRPF40AO75400 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.23□□□□□ -1.57
PRPF40AO75400 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.23□□□□□ -1.57
PRPF40AO75400 COPS8P3-201ENST00000526024 482 ntBASIC5.23□□□□□ -1.57
PRPF40AO75400 AC005951.2-201ENST00000576282 495 ntBASIC5.23□□□□□ -1.57
PRPF40AO75400 MIR4737-201ENST00000583979 81 ntBASIC5.23□□□□□ -1.57
PRPF40AO75400 AC080078.3-201ENST00000605407 463 ntBASIC5.23□□□□□ -1.57
PRPF40AO75400 AC022893.3-201ENST00000607665 437 ntBASIC5.23□□□□□ -1.57
PRPF40AO75400 SMCR2_2.1-201ENST00000619783 161 ntBASIC5.23□□□□□ -1.57
PRPF40AO75400 AC019278.1-201ENST00000623516 479 ntBASIC5.23□□□□□ -1.57
PRPF40AO75400 AC134503.1-201ENST00000633048 54 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms