Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 MRPS17P3-201ENST00000465453 385 ntBASIC2.69□□□□□ -1.98
AP3B1O00203 AC090525.1-201ENST00000479116 478 ntBASIC2.69□□□□□ -1.98
AP3B1O00203 AC011825.1-201ENST00000484967 388 ntBASIC2.69□□□□□ -1.98
AP3B1O00203 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.69□□□□□ -1.98
AP3B1O00203 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.69□□□□□ -1.98
AP3B1O00203 MTCYBP16-201ENST00000509187 1129 ntBASIC2.69□□□□□ -1.98
AP3B1O00203 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.69□□□□□ -1.98
AP3B1O00203 AC093677.1-201ENST00000514414 678 ntBASIC2.69□□□□□ -1.98
AP3B1O00203 AP003355.1-201ENST00000518956 587 ntBASIC2.69□□□□□ -1.98
AP3B1O00203 OR5BN1P-201ENST00000532955 829 ntBASIC2.69□□□□□ -1.98
AP3B1O00203 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.69□□□□□ -1.98
AP3B1O00203 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.69□□□□□ -1.98
AP3B1O00203 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
AP3B1O00203 AL136520.1-202ENST00000555494 763 ntBASIC2.69□□□□□ -1.98
AP3B1O00203 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC2.69□□□□□ -1.98
AP3B1O00203 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.69□□□□□ -1.98
AP3B1O00203 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.69□□□□□ -1.98
AP3B1O00203 AC069304.2-201ENST00000605154 435 ntBASIC2.69□□□□□ -1.98
AP3B1O00203 AC018926.1-201ENST00000616335 435 ntBASIC2.69□□□□□ -1.98
AP3B1O00203 AL357080.1-201ENST00000617394 239 ntBASIC2.69□□□□□ -1.98
AP3B1O00203 AL603758.1-201ENST00000618654 241 ntBASIC2.69□□□□□ -1.98
AP3B1O00203 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.69□□□□□ -1.98
AP3B1O00203 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.69□□□□□ -1.98
AP3B1O00203 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
AP3B1O00203 RNU5E-8P-201ENST00000363502 116 ntBASIC2.68□□□□□ -1.98
AP3B1O00203 Y_RNA.234-201ENST00000364409 97 ntBASIC2.68□□□□□ -1.98
AP3B1O00203 RNU6-1078P-201ENST00000364522 103 ntBASIC2.68□□□□□ -1.98
AP3B1O00203 SNORA67.1-201ENST00000364749 141 ntBASIC2.68□□□□□ -1.98
AP3B1O00203 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.68□□□□□ -1.98
AP3B1O00203 RNU2-72P-201ENST00000411175 163 ntBASIC2.68□□□□□ -1.98
AP3B1O00203 AC080125.1-201ENST00000414888 684 ntBASIC2.68□□□□□ -1.98
AP3B1O00203 AC007919.1-201ENST00000429380 217 ntBASIC2.68□□□□□ -1.98
AP3B1O00203 GTF2IP7-202ENST00000436677 309 ntBASIC2.68□□□□□ -1.98
AP3B1O00203 PTGES3P1-201ENST00000439531 483 ntBASIC2.68□□□□□ -1.98
AP3B1O00203 COX6CP12-201ENST00000446748 202 ntBASIC2.68□□□□□ -1.98
AP3B1O00203 RPS20P22-201ENST00000473700 357 ntBASIC2.68□□□□□ -1.98
AP3B1O00203 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.68□□□□□ -1.98
AP3B1O00203 FAM172BP-201ENST00000487497 1089 ntBASIC2.68□□□□□ -1.98
AP3B1O00203 AC090096.1-201ENST00000489168 390 ntBASIC2.68□□□□□ -1.98
AP3B1O00203 AC093801.2-201ENST00000503966 1050 ntBASIC2.68□□□□□ -1.98
AP3B1O00203 AC026427.2-201ENST00000506228 536 ntBASIC2.68□□□□□ -1.98
AP3B1O00203 SLC25A15P5-201ENST00000508033 253 ntBASIC2.68□□□□□ -1.98
AP3B1O00203 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.68□□□□□ -1.98
AP3B1O00203 MTCO3P27-201ENST00000514397 196 ntBASIC2.68□□□□□ -1.98
AP3B1O00203 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.68□□□□□ -1.98
AP3B1O00203 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
AP3B1O00203 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.68□□□□□ -1.98
AP3B1O00203 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.68□□□□□ -1.98
AP3B1O00203 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
AP3B1O00203 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
AP3B1O00203 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
AP3B1O00203 Z82209.1-201ENST00000422141 2135 ntBASIC2.68□□□□□ -1.98
AP3B1O00203 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.67□□□□□ -1.98
AP3B1O00203 AC010329.5-201ENST00000623497 2174 ntBASIC2.67□□□□□ -1.98
AP3B1O00203 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
AP3B1O00203 RNU6-140P-201ENST00000384566 108 ntBASIC2.67□□□□□ -1.98
AP3B1O00203 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
AP3B1O00203 TPMTP2-201ENST00000414372 726 ntBASIC2.67□□□□□ -1.98
AP3B1O00203 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.67□□□□□ -1.98
AP3B1O00203 AC007435.1-201ENST00000421086 415 ntBASIC2.67□□□□□ -1.98
AP3B1O00203 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.67□□□□□ -1.98
AP3B1O00203 ZNF736P7Y-201ENST00000425158 820 ntBASIC2.67□□□□□ -1.98
AP3B1O00203 MTCO3P30-201ENST00000426425 670 ntBASIC2.67□□□□□ -1.98
AP3B1O00203 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.67□□□□□ -1.98
AP3B1O00203 AC011816.1-201ENST00000441346 546 ntBASIC2.67□□□□□ -1.98
AP3B1O00203 AL135938.1-201ENST00000443141 297 ntBASIC2.67□□□□□ -1.98
AP3B1O00203 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
AP3B1O00203 TRGVB-201ENST00000453257 471 ntBASIC2.67□□□□□ -1.98
AP3B1O00203 MTND1P9-201ENST00000453775 944 ntBASIC2.67□□□□□ -1.98
AP3B1O00203 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.67□□□□□ -1.98
AP3B1O00203 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.67□□□□□ -1.98
AP3B1O00203 RPL26P9-201ENST00000457466 433 ntBASIC2.67□□□□□ -1.98
AP3B1O00203 KC877373.1-201ENST00000479066 408 ntBASIC2.67□□□□□ -1.98
AP3B1O00203 AC105252.1-201ENST00000503089 286 ntBASIC2.67□□□□□ -1.98
AP3B1O00203 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.67□□□□□ -1.98
AP3B1O00203 HMGB1P28-201ENST00000507778 552 ntBASIC2.67□□□□□ -1.98
AP3B1O00203 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.67□□□□□ -1.98
AP3B1O00203 AC022447.1-201ENST00000515358 464 ntBASIC2.67□□□□□ -1.98
AP3B1O00203 RNA5SP282-201ENST00000516355 108 ntBASIC2.67□□□□□ -1.98
AP3B1O00203 HMGN1P28-201ENST00000521340 364 ntBASIC2.67□□□□□ -1.98
AP3B1O00203 DEFB130C-202ENST00000530001 230 ntBASIC2.67□□□□□ -1.98
AP3B1O00203 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
AP3B1O00203 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.67□□□□□ -1.98
AP3B1O00203 AC087897.1-201ENST00000550134 156 ntBASIC2.67□□□□□ -1.98
AP3B1O00203 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.67□□□□□ -1.98
AP3B1O00203 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.67□□□□□ -1.98
AP3B1O00203 AC023824.2-201ENST00000566185 400 ntBASIC2.67□□□□□ -1.98
AP3B1O00203 MIR3912-201ENST00000577566 105 ntBASIC2.67□□□□□ -1.98
AP3B1O00203 ELOCP29-201ENST00000588193 334 ntBASIC2.67□□□□□ -1.98
AP3B1O00203 AC004987.4-201ENST00000603383 338 ntBASIC2.67□□□□□ -1.98
AP3B1O00203 DUXAP3-201ENST00000603616 594 ntBASIC2.67□□□□□ -1.98
AP3B1O00203 AC099785.1-201ENST00000605697 437 ntBASIC2.67□□□□□ -1.98
AP3B1O00203 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.67□□□□□ -1.98
AP3B1O00203 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
AP3B1O00203 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
AP3B1O00203 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.67□□□□□ -1.98
AP3B1O00203 AP005901.5-201ENST00000545779 1796 ntBASIC2.66□□□□□ -1.98
AP3B1O00203 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
AP3B1O00203 AC009902.3-201ENST00000606235 2172 ntBASIC2.66□□□□□ -1.98
AP3B1O00203 RNU6-359P-201ENST00000365466 108 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms