Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
SRRM4A7MD48 CCNG1P1-201ENST00000406783 885 ntBASIC2.82□□□□□ -1.96
SRRM4A7MD48 SNX10-203ENST00000409367 746 ntTSL 5 BASIC2.82□□□□□ -1.96
SRRM4A7MD48 RPL31P12-201ENST00000422587 358 ntBASIC2.82□□□□□ -1.96
SRRM4A7MD48 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.82□□□□□ -1.96
SRRM4A7MD48 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.82□□□□□ -1.96
SRRM4A7MD48 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC2.82□□□□□ -1.96
SRRM4A7MD48 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC2.82□□□□□ -1.96
SRRM4A7MD48 AC016696.1-201ENST00000446949 318 ntBASIC2.82□□□□□ -1.96
SRRM4A7MD48 RPS3AP46-201ENST00000448352 682 ntBASIC2.82□□□□□ -1.96
SRRM4A7MD48 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC2.82□□□□□ -1.96
SRRM4A7MD48 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.82□□□□□ -1.96
SRRM4A7MD48 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.82□□□□□ -1.96
SRRM4A7MD48 MTCO2P18-201ENST00000457151 658 ntBASIC2.82□□□□□ -1.96
SRRM4A7MD48 RNA5SP269-201ENST00000459032 137 ntBASIC2.82□□□□□ -1.96
SRRM4A7MD48 SNORD97-201ENST00000459187 142 ntBASIC2.82□□□□□ -1.96
SRRM4A7MD48 MTCO2P29-201ENST00000465212 189 ntBASIC2.82□□□□□ -1.96
SRRM4A7MD48 RPL7L1P8-201ENST00000469911 741 ntBASIC2.82□□□□□ -1.96
SRRM4A7MD48 AC023598.1-201ENST00000472521 361 ntBASIC2.82□□□□□ -1.96
SRRM4A7MD48 AC020893.1-201ENST00000502452 580 ntBASIC2.82□□□□□ -1.96
SRRM4A7MD48 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SRRM4A7MD48 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC2.82□□□□□ -1.96
SRRM4A7MD48 FABP5P5-201ENST00000515537 406 ntBASIC2.82□□□□□ -1.96
SRRM4A7MD48 RNU6-1256P-201ENST00000516539 103 ntBASIC2.82□□□□□ -1.96
SRRM4A7MD48 NDUFB9P3-201ENST00000521269 501 ntBASIC2.82□□□□□ -1.96
SRRM4A7MD48 AC007115.1-201ENST00000546853 234 ntBASIC2.82□□□□□ -1.96
SRRM4A7MD48 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.82□□□□□ -1.96
SRRM4A7MD48 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.82□□□□□ -1.96
SRRM4A7MD48 ACTR3BP3-201ENST00000565577 979 ntBASIC2.82□□□□□ -1.96
SRRM4A7MD48 HMGB1P6-201ENST00000569046 646 ntBASIC2.82□□□□□ -1.96
SRRM4A7MD48 MIR5697-201ENST00000578045 78 ntBASIC2.82□□□□□ -1.96
SRRM4A7MD48 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.82□□□□□ -1.96
SRRM4A7MD48 AC112191.3-201ENST00000604371 277 ntBASIC2.82□□□□□ -1.96
SRRM4A7MD48 AC068276.1-201ENST00000605793 379 ntBASIC2.82□□□□□ -1.96
SRRM4A7MD48 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.82□□□□□ -1.96
SRRM4A7MD48 AL121772.2-201ENST00000614331 297 ntBASIC2.82□□□□□ -1.96
SRRM4A7MD48 AC110801.1-201ENST00000623590 212 ntBASIC2.82□□□□□ -1.96
SRRM4A7MD48 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC2.82□□□□□ -1.96
SRRM4A7MD48 AC103988.1-201ENST00000566382 2177 ntBASIC2.82□□□□□ -1.96
SRRM4A7MD48 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SRRM4A7MD48 AL390237.1-201ENST00000404226 1415 ntBASIC2.82□□□□□ -1.96
SRRM4A7MD48 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
SRRM4A7MD48 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SRRM4A7MD48 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
SRRM4A7MD48 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.81□□□□□ -1.96
SRRM4A7MD48 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.81□□□□□ -1.96
SRRM4A7MD48 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC2.81□□□□□ -1.96
SRRM4A7MD48 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.81□□□□□ -1.96
SRRM4A7MD48 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SRRM4A7MD48 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SRRM4A7MD48 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SRRM4A7MD48 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
SRRM4A7MD48 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
SRRM4A7MD48 MIR30E-201ENST00000362104 92 ntBASIC2.81□□□□□ -1.96
SRRM4A7MD48 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SRRM4A7MD48 RPL21P17-201ENST00000397467 475 ntBASIC2.81□□□□□ -1.96
SRRM4A7MD48 AL356967.1-201ENST00000406305 431 ntBASIC2.81□□□□□ -1.96
SRRM4A7MD48 NPM1P11-201ENST00000417106 855 ntBASIC2.81□□□□□ -1.96
SRRM4A7MD48 RPL17P36-201ENST00000420302 549 ntBASIC2.81□□□□□ -1.96
SRRM4A7MD48 AC244035.1-201ENST00000430042 390 ntBASIC2.81□□□□□ -1.96
SRRM4A7MD48 DLGAP5P1-201ENST00000430307 464 ntBASIC2.81□□□□□ -1.96
SRRM4A7MD48 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.81□□□□□ -1.96
SRRM4A7MD48 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC2.81□□□□□ -1.96
SRRM4A7MD48 AL445584.1-201ENST00000431451 330 ntBASIC2.81□□□□□ -1.96
SRRM4A7MD48 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC2.81□□□□□ -1.96
SRRM4A7MD48 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SRRM4A7MD48 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC2.81□□□□□ -1.96
SRRM4A7MD48 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.81□□□□□ -1.96
SRRM4A7MD48 Z82210.1-201ENST00000440037 231 ntBASIC2.81□□□□□ -1.96
SRRM4A7MD48 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC2.81□□□□□ -1.96
SRRM4A7MD48 AC020550.1-201ENST00000447385 163 ntBASIC2.81□□□□□ -1.96
SRRM4A7MD48 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.81□□□□□ -1.96
SRRM4A7MD48 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC2.81□□□□□ -1.96
SRRM4A7MD48 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SRRM4A7MD48 AC006539.3-201ENST00000454258 129 ntBASIC2.81□□□□□ -1.96
SRRM4A7MD48 MTND1P12-201ENST00000455231 147 ntBASIC2.81□□□□□ -1.96
SRRM4A7MD48 snoU109.1-201ENST00000459339 135 ntBASIC2.81□□□□□ -1.96
SRRM4A7MD48 AC010401.1-201ENST00000463867 348 ntBASIC2.81□□□□□ -1.96
SRRM4A7MD48 AC068587.1-201ENST00000483613 781 ntBASIC2.81□□□□□ -1.96
SRRM4A7MD48 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.81□□□□□ -1.96
SRRM4A7MD48 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
SRRM4A7MD48 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
SRRM4A7MD48 HMGN1P11-201ENST00000508668 303 ntBASIC2.81□□□□□ -1.96
SRRM4A7MD48 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.81□□□□□ -1.96
SRRM4A7MD48 RNU6-927P-201ENST00000516199 100 ntBASIC2.81□□□□□ -1.96
SRRM4A7MD48 RNU2-10P-201ENST00000516375 211 ntBASIC2.81□□□□□ -1.96
SRRM4A7MD48 RNU6-64P-201ENST00000517119 105 ntBASIC2.81□□□□□ -1.96
SRRM4A7MD48 IGKV3OR22-2-201ENST00000517943 313 ntBASIC2.81□□□□□ -1.96
SRRM4A7MD48 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC2.81□□□□□ -1.96
SRRM4A7MD48 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC2.81□□□□□ -1.96
SRRM4A7MD48 AC004024.1-201ENST00000549244 247 ntBASIC2.81□□□□□ -1.96
SRRM4A7MD48 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC2.81□□□□□ -1.96
SRRM4A7MD48 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.81□□□□□ -1.96
SRRM4A7MD48 ZNF519P3-201ENST00000557158 1032 ntBASIC2.81□□□□□ -1.96
SRRM4A7MD48 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.81□□□□□ -1.96
SRRM4A7MD48 AC067852.3-201ENST00000589177 561 ntBASIC2.81□□□□□ -1.96
SRRM4A7MD48 AL670379.6-201ENST00000603753 252 ntBASIC2.81□□□□□ -1.96
SRRM4A7MD48 AC010591.1-201ENST00000603941 649 ntBASIC2.81□□□□□ -1.96
SRRM4A7MD48 AL670379.11-201ENST00000604059 253 ntBASIC2.81□□□□□ -1.96
SRRM4A7MD48 AC013553.2-201ENST00000604244 589 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms