Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 AL590002.1-201ENST00000406554 418 ntBASIC3.66□□□□□ -1.82
RAI2Q9Y5P3 CCNG1P1-201ENST00000406783 885 ntBASIC3.66□□□□□ -1.82
RAI2Q9Y5P3 MTND1P21-201ENST00000412991 285 ntBASIC3.66□□□□□ -1.82
RAI2Q9Y5P3 AC127526.1-201ENST00000417526 366 ntBASIC3.66□□□□□ -1.82
RAI2Q9Y5P3 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
RAI2Q9Y5P3 AC005517.2-201ENST00000424673 553 ntBASIC3.66□□□□□ -1.82
RAI2Q9Y5P3 USP9YP18-201ENST00000425912 695 ntBASIC3.66□□□□□ -1.82
RAI2Q9Y5P3 TIMM9P3-201ENST00000428659 274 ntBASIC3.66□□□□□ -1.82
RAI2Q9Y5P3 AC133104.1-201ENST00000429100 218 ntBASIC3.66□□□□□ -1.82
RAI2Q9Y5P3 AL596276.1-201ENST00000434465 418 ntBASIC3.66□□□□□ -1.82
RAI2Q9Y5P3 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.66□□□□□ -1.82
RAI2Q9Y5P3 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.66□□□□□ -1.82
RAI2Q9Y5P3 AL136380.1-201ENST00000447970 162 ntBASIC3.66□□□□□ -1.82
RAI2Q9Y5P3 AL353691.1-201ENST00000451332 387 ntBASIC3.66□□□□□ -1.82
RAI2Q9Y5P3 C1DP4-201ENST00000455429 424 ntBASIC3.66□□□□□ -1.82
RAI2Q9Y5P3 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.66□□□□□ -1.82
RAI2Q9Y5P3 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.66□□□□□ -1.82
RAI2Q9Y5P3 AC007182.2-201ENST00000489251 402 ntBASIC3.66□□□□□ -1.82
RAI2Q9Y5P3 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.66□□□□□ -1.82
RAI2Q9Y5P3 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.66□□□□□ -1.82
RAI2Q9Y5P3 RANP9-201ENST00000519957 271 ntBASIC3.66□□□□□ -1.82
RAI2Q9Y5P3 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.66□□□□□ -1.82
RAI2Q9Y5P3 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.66□□□□□ -1.82
RAI2Q9Y5P3 AC008489.1-201ENST00000524271 483 ntBASIC3.66□□□□□ -1.82
RAI2Q9Y5P3 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.66□□□□□ -1.82
RAI2Q9Y5P3 AC007458.1-201ENST00000542812 373 ntBASIC3.66□□□□□ -1.82
RAI2Q9Y5P3 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.66□□□□□ -1.82
RAI2Q9Y5P3 MTCO3P24-201ENST00000572729 782 ntBASIC3.66□□□□□ -1.82
RAI2Q9Y5P3 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.66□□□□□ -1.82
RAI2Q9Y5P3 AC006504.3-201ENST00000586818 523 ntBASIC3.66□□□□□ -1.82
RAI2Q9Y5P3 LLPHP1-201ENST00000603571 367 ntBASIC3.66□□□□□ -1.82
RAI2Q9Y5P3 AC006077.1-201ENST00000604746 343 ntBASIC3.66□□□□□ -1.82
RAI2Q9Y5P3 AC011816.2-201ENST00000607089 556 ntBASIC3.66□□□□□ -1.82
RAI2Q9Y5P3 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.66□□□□□ -1.82
RAI2Q9Y5P3 AL590282.1-201ENST00000610379 1136 ntBASIC3.66□□□□□ -1.82
RAI2Q9Y5P3 MIR8058-201ENST00000615737 89 ntBASIC3.66□□□□□ -1.82
RAI2Q9Y5P3 MIR8057-201ENST00000620957 69 ntBASIC3.66□□□□□ -1.82
RAI2Q9Y5P3 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.66□□□□□ -1.82
RAI2Q9Y5P3 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.66□□□□□ -1.82
RAI2Q9Y5P3 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
RAI2Q9Y5P3 AL732372.2-225ENST00000642124 456 ntBASIC3.66□□□□□ -1.82
RAI2Q9Y5P3 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.66□□□□□ -1.82
RAI2Q9Y5P3 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.66□□□□□ -1.82
RAI2Q9Y5P3 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RAI2Q9Y5P3 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.65□□□□□ -1.82
RAI2Q9Y5P3 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
RAI2Q9Y5P3 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.82
RAI2Q9Y5P3 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.65□□□□□ -1.82
RAI2Q9Y5P3 AC009902.3-201ENST00000606235 2172 ntBASIC3.65□□□□□ -1.82
RAI2Q9Y5P3 AC007823.1-201ENST00000569932 1566 ntBASIC3.65□□□□□ -1.82
RAI2Q9Y5P3 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.65□□□□□ -1.83
RAI2Q9Y5P3 Y_RNA.9-201ENST00000362354 101 ntBASIC3.65□□□□□ -1.83
RAI2Q9Y5P3 SNORA38.1-201ENST00000364172 131 ntBASIC3.65□□□□□ -1.83
RAI2Q9Y5P3 Y_RNA.554-201ENST00000384672 102 ntBASIC3.65□□□□□ -1.83
RAI2Q9Y5P3 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
RAI2Q9Y5P3 MTCO3P40-201ENST00000392516 676 ntBASIC3.65□□□□□ -1.83
RAI2Q9Y5P3 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.65□□□□□ -1.83
RAI2Q9Y5P3 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.65□□□□□ -1.83
RAI2Q9Y5P3 RPS15AP12-201ENST00000419498 388 ntBASIC3.65□□□□□ -1.83
RAI2Q9Y5P3 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.65□□□□□ -1.83
RAI2Q9Y5P3 AC019097.1-201ENST00000424783 735 ntBASIC3.65□□□□□ -1.83
RAI2Q9Y5P3 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
RAI2Q9Y5P3 AL049734.2-201ENST00000441066 616 ntBASIC3.65□□□□□ -1.83
RAI2Q9Y5P3 RPL23AP33-201ENST00000442301 452 ntBASIC3.65□□□□□ -1.83
RAI2Q9Y5P3 AL590399.6-201ENST00000446396 307 ntBASIC3.65□□□□□ -1.83
RAI2Q9Y5P3 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.65□□□□□ -1.83
RAI2Q9Y5P3 Z99127.3-201ENST00000448158 395 ntBASIC3.65□□□□□ -1.83
RAI2Q9Y5P3 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.65□□□□□ -1.83
RAI2Q9Y5P3 AC104308.1-201ENST00000454621 333 ntBASIC3.65□□□□□ -1.83
RAI2Q9Y5P3 AL359385.1-201ENST00000456509 365 ntBASIC3.65□□□□□ -1.83
RAI2Q9Y5P3 MTAPP1-201ENST00000489154 819 ntBASIC3.65□□□□□ -1.83
RAI2Q9Y5P3 AC010587.1-201ENST00000505809 469 ntBASIC3.65□□□□□ -1.83
RAI2Q9Y5P3 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.65□□□□□ -1.83
RAI2Q9Y5P3 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.65□□□□□ -1.83
RAI2Q9Y5P3 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.65□□□□□ -1.83
RAI2Q9Y5P3 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.65□□□□□ -1.83
RAI2Q9Y5P3 AC107954.1-201ENST00000565906 727 ntBASIC3.65□□□□□ -1.83
RAI2Q9Y5P3 AL669831.4-202ENST00000590817 238 ntBASIC3.65□□□□□ -1.83
RAI2Q9Y5P3 MIR6715B-201ENST00000637172 77 ntBASIC3.65□□□□□ -1.83
RAI2Q9Y5P3 AC244258.1-201ENST00000637553 1071 ntBASIC3.65□□□□□ -1.83
RAI2Q9Y5P3 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
RAI2Q9Y5P3 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.65□□□□□ -1.83
RAI2Q9Y5P3 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.65□□□□□ -1.83
RAI2Q9Y5P3 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.65□□□□□ -1.83
RAI2Q9Y5P3 AC058791.1-201ENST00000608412 3198 ntBASIC3.65□□□□□ -1.83
RAI2Q9Y5P3 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RAI2Q9Y5P3 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RAI2Q9Y5P3 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.64□□□□□ -1.83
RAI2Q9Y5P3 AC007656.2-201ENST00000624902 4547 ntBASIC3.64□□□□□ -1.83
RAI2Q9Y5P3 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RAI2Q9Y5P3 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.64□□□□□ -1.83
RAI2Q9Y5P3 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RAI2Q9Y5P3 SNORD9-201ENST00000362566 104 ntBASIC3.64□□□□□ -1.83
RAI2Q9Y5P3 Y_RNA.372-201ENST00000365599 102 ntBASIC3.64□□□□□ -1.83
RAI2Q9Y5P3 RNU6-114P-201ENST00000384704 105 ntBASIC3.64□□□□□ -1.83
RAI2Q9Y5P3 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
RAI2Q9Y5P3 SNORD115-47-201ENST00000391226 86 ntBASIC3.64□□□□□ -1.83
RAI2Q9Y5P3 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
RAI2Q9Y5P3 UBA52P6-201ENST00000399822 382 ntBASIC3.64□□□□□ -1.83
RAI2Q9Y5P3 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms