Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 RNA5SP52-201ENST00000362448 134 ntBASIC5.78□□□□□ -1.48
PCDHB3Q9Y5E6 RNU6-1155P-201ENST00000363554 107 ntBASIC5.78□□□□□ -1.48
PCDHB3Q9Y5E6 RNU4-9P-201ENST00000364951 139 ntBASIC5.78□□□□□ -1.48
PCDHB3Q9Y5E6 RNU6-395P-201ENST00000365662 106 ntBASIC5.78□□□□□ -1.48
PCDHB3Q9Y5E6 Y_RNA.412-201ENST00000384001 104 ntBASIC5.78□□□□□ -1.48
PCDHB3Q9Y5E6 Y_RNA.570-201ENST00000384750 101 ntBASIC5.78□□□□□ -1.48
PCDHB3Q9Y5E6 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.78□□□□□ -1.48
PCDHB3Q9Y5E6 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDHB3Q9Y5E6 AL592148.1-201ENST00000413568 445 ntBASIC5.78□□□□□ -1.48
PCDHB3Q9Y5E6 AL354868.1-201ENST00000417077 482 ntBASIC5.78□□□□□ -1.48
PCDHB3Q9Y5E6 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDHB3Q9Y5E6 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDHB3Q9Y5E6 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.78□□□□□ -1.48
PCDHB3Q9Y5E6 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.78□□□□□ -1.48
PCDHB3Q9Y5E6 AL512844.2-201ENST00000433990 593 ntBASIC5.78□□□□□ -1.48
PCDHB3Q9Y5E6 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.78□□□□□ -1.48
PCDHB3Q9Y5E6 IFNA11P-201ENST00000446352 526 ntBASIC5.78□□□□□ -1.48
PCDHB3Q9Y5E6 AL445665.1-202ENST00000452436 324 ntBASIC5.78□□□□□ -1.48
PCDHB3Q9Y5E6 AC124945.1-201ENST00000485133 188 ntBASIC5.78□□□□□ -1.48
PCDHB3Q9Y5E6 RN7SL193P-201ENST00000491708 276 ntBASIC5.78□□□□□ -1.48
PCDHB3Q9Y5E6 RN7SL284P-201ENST00000498823 275 ntBASIC5.78□□□□□ -1.48
PCDHB3Q9Y5E6 CYCTP-201ENST00000504253 315 ntBASIC5.78□□□□□ -1.48
PCDHB3Q9Y5E6 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.78□□□□□ -1.48
PCDHB3Q9Y5E6 RNU4ATAC-201ENST00000580972 127 ntBASIC5.78□□□□□ -1.48
PCDHB3Q9Y5E6 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDHB3Q9Y5E6 MIR6809-201ENST00000612189 116 ntBASIC5.78□□□□□ -1.48
PCDHB3Q9Y5E6 MIR6886-201ENST00000619864 61 ntBASIC5.78□□□□□ -1.48
PCDHB3Q9Y5E6 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.78□□□□□ -1.48
PCDHB3Q9Y5E6 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHB3Q9Y5E6 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHB3Q9Y5E6 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
PCDHB3Q9Y5E6 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.78□□□□□ -1.48
PCDHB3Q9Y5E6 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.78□□□□□ -1.48
PCDHB3Q9Y5E6 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.78□□□□□ -1.48
PCDHB3Q9Y5E6 AC093671.1-201ENST00000624981 2929 ntBASIC5.78□□□□□ -1.48
PCDHB3Q9Y5E6 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.77□□□□□ -1.49
PCDHB3Q9Y5E6 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHB3Q9Y5E6 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHB3Q9Y5E6 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
PCDHB3Q9Y5E6 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
PCDHB3Q9Y5E6 UBE2L2-201ENST00000254302 429 ntBASIC5.77□□□□□ -1.49
PCDHB3Q9Y5E6 Y_RNA.33-201ENST00000362591 102 ntBASIC5.77□□□□□ -1.49
PCDHB3Q9Y5E6 RN7SKP128-201ENST00000364270 303 ntBASIC5.77□□□□□ -1.49
PCDHB3Q9Y5E6 RNU6-898P-201ENST00000365627 104 ntBASIC5.77□□□□□ -1.49
PCDHB3Q9Y5E6 RNU6-80P-201ENST00000384195 107 ntBASIC5.77□□□□□ -1.49
PCDHB3Q9Y5E6 RNU6-843P-201ENST00000384454 104 ntBASIC5.77□□□□□ -1.49
PCDHB3Q9Y5E6 LAP3P1-201ENST00000403648 294 ntBASIC5.77□□□□□ -1.49
PCDHB3Q9Y5E6 AL357075.1-201ENST00000404107 726 ntBASIC5.77□□□□□ -1.49
PCDHB3Q9Y5E6 RPS3AP2-201ENST00000407190 754 ntBASIC5.77□□□□□ -1.49
PCDHB3Q9Y5E6 SNORD12B-201ENST00000410433 91 ntBASIC5.77□□□□□ -1.49
PCDHB3Q9Y5E6 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC5.77□□□□□ -1.49
PCDHB3Q9Y5E6 AC079355.1-201ENST00000421770 223 ntBASIC5.77□□□□□ -1.49
PCDHB3Q9Y5E6 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.77□□□□□ -1.49
PCDHB3Q9Y5E6 MRPS21P2-201ENST00000424704 264 ntBASIC5.77□□□□□ -1.49
PCDHB3Q9Y5E6 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.77□□□□□ -1.49
PCDHB3Q9Y5E6 AC016712.1-201ENST00000431088 378 ntBASIC5.77□□□□□ -1.49
PCDHB3Q9Y5E6 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC5.77□□□□□ -1.49
PCDHB3Q9Y5E6 AC016027.4-201ENST00000450866 277 ntBASIC5.77□□□□□ -1.49
PCDHB3Q9Y5E6 BX276092.4-201ENST00000452056 248 ntBASIC5.77□□□□□ -1.49
PCDHB3Q9Y5E6 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.77□□□□□ -1.49
PCDHB3Q9Y5E6 AC016925.1-201ENST00000458303 298 ntBASIC5.77□□□□□ -1.49
PCDHB3Q9Y5E6 AC117440.1-201ENST00000474107 571 ntBASIC5.77□□□□□ -1.49
PCDHB3Q9Y5E6 RPL26P26-201ENST00000480251 434 ntBASIC5.77□□□□□ -1.49
PCDHB3Q9Y5E6 AC114781.3-201ENST00000512083 142 ntBASIC5.77□□□□□ -1.49
PCDHB3Q9Y5E6 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.77□□□□□ -1.49
PCDHB3Q9Y5E6 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.77□□□□□ -1.49
PCDHB3Q9Y5E6 AC008489.1-201ENST00000524271 483 ntBASIC5.77□□□□□ -1.49
PCDHB3Q9Y5E6 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC5.77□□□□□ -1.49
PCDHB3Q9Y5E6 AC010928.2-201ENST00000588017 287 ntBASIC5.77□□□□□ -1.49
PCDHB3Q9Y5E6 AC119403.2-201ENST00000590960 598 ntBASIC5.77□□□□□ -1.49
PCDHB3Q9Y5E6 AC005046.1-201ENST00000608515 625 ntBASIC5.77□□□□□ -1.49
PCDHB3Q9Y5E6 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC5.77□□□□□ -1.49
PCDHB3Q9Y5E6 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHB3Q9Y5E6 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHB3Q9Y5E6 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.77□□□□□ -1.49
PCDHB3Q9Y5E6 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHB3Q9Y5E6 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.77□□□□□ -1.49
PCDHB3Q9Y5E6 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.77□□□□□ -1.49
PCDHB3Q9Y5E6 THAP12P5-201ENST00000405864 2275 ntBASIC5.77□□□□□ -1.49
PCDHB3Q9Y5E6 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHB3Q9Y5E6 AC012254.3-201ENST00000591183 2117 ntBASIC5.77□□□□□ -1.49
PCDHB3Q9Y5E6 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHB3Q9Y5E6 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHB3Q9Y5E6 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.77□□□□□ -1.49
PCDHB3Q9Y5E6 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHB3Q9Y5E6 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHB3Q9Y5E6 NCAPGP1-201ENST00000505112 1814 ntBASIC5.76□□□□□ -1.49
PCDHB3Q9Y5E6 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.76□□□□□ -1.49
PCDHB3Q9Y5E6 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PCDHB3Q9Y5E6 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PCDHB3Q9Y5E6 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PCDHB3Q9Y5E6 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.76□□□□□ -1.49
PCDHB3Q9Y5E6 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
PCDHB3Q9Y5E6 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.76□□□□□ -1.49
PCDHB3Q9Y5E6 Y_RNA.7-201ENST00000362352 102 ntBASIC5.76□□□□□ -1.49
PCDHB3Q9Y5E6 U3.10-201ENST00000364459 214 ntBASIC5.76□□□□□ -1.49
PCDHB3Q9Y5E6 MIR301A-201ENST00000385261 86 ntBASIC5.76□□□□□ -1.49
PCDHB3Q9Y5E6 RNU2-43P-201ENST00000410306 190 ntBASIC5.76□□□□□ -1.49
PCDHB3Q9Y5E6 RN7SKP286-201ENST00000410894 299 ntBASIC5.76□□□□□ -1.49
PCDHB3Q9Y5E6 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms