Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.6□□□□□ -1.51
NOD1Q9Y239 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.6□□□□□ -1.51
NOD1Q9Y239 RPL7P2-201ENST00000427639 268 ntBASIC5.6□□□□□ -1.51
NOD1Q9Y239 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.6□□□□□ -1.51
NOD1Q9Y239 CKS1BP5-201ENST00000434172 273 ntBASIC5.6□□□□□ -1.51
NOD1Q9Y239 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC5.6□□□□□ -1.51
NOD1Q9Y239 DAP3P1-201ENST00000441522 278 ntBASIC5.6□□□□□ -1.51
NOD1Q9Y239 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC5.6□□□□□ -1.51
NOD1Q9Y239 AC073910.1-201ENST00000445047 438 ntBASIC5.6□□□□□ -1.51
NOD1Q9Y239 RPL29P29-201ENST00000448725 423 ntBASIC5.6□□□□□ -1.51
NOD1Q9Y239 TPT1P12-201ENST00000448968 492 ntBASIC5.6□□□□□ -1.51
NOD1Q9Y239 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.6□□□□□ -1.51
NOD1Q9Y239 RPS24P6-201ENST00000452670 400 ntBASIC5.6□□□□□ -1.51
NOD1Q9Y239 CEACAMP4-201ENST00000457676 421 ntBASIC5.6□□□□□ -1.51
NOD1Q9Y239 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.6□□□□□ -1.51
NOD1Q9Y239 AC083829.1-201ENST00000503756 657 ntBASIC5.6□□□□□ -1.51
NOD1Q9Y239 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.6□□□□□ -1.51
NOD1Q9Y239 IGHV3-76-201ENST00000522465 295 ntBASIC5.6□□□□□ -1.51
NOD1Q9Y239 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.6□□□□□ -1.51
NOD1Q9Y239 AC023157.2-201ENST00000540596 141 ntBASIC5.6□□□□□ -1.51
NOD1Q9Y239 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.6□□□□□ -1.51
NOD1Q9Y239 AL138960.1-201ENST00000613838 513 ntBASIC5.6□□□□□ -1.51
NOD1Q9Y239 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NOD1Q9Y239 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NOD1Q9Y239 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NOD1Q9Y239 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NOD1Q9Y239 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.6□□□□□ -1.51
NOD1Q9Y239 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NOD1Q9Y239 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
NOD1Q9Y239 MAPK10-338ENST00000641647 3362 ntBASIC5.59□□□□□ -1.51
NOD1Q9Y239 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
NOD1Q9Y239 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NOD1Q9Y239 AC073136.1-201ENST00000449426 2884 ntBASIC5.59□□□□□ -1.51
NOD1Q9Y239 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.59□□□□□ -1.51
NOD1Q9Y239 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC5.59□□□□□ -1.51
NOD1Q9Y239 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NOD1Q9Y239 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NOD1Q9Y239 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.59□□□□□ -1.51
NOD1Q9Y239 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NOD1Q9Y239 AC005183.1-201ENST00000603687 1979 ntBASIC5.59□□□□□ -1.51
NOD1Q9Y239 AC233263.6-201ENST00000631132 1963 ntBASIC5.59□□□□□ -1.51
NOD1Q9Y239 RNU4-42P-201ENST00000364738 142 ntBASIC5.59□□□□□ -1.51
NOD1Q9Y239 RNU6-837P-201ENST00000391056 108 ntBASIC5.59□□□□□ -1.51
NOD1Q9Y239 AL138885.1-201ENST00000405921 675 ntBASIC5.59□□□□□ -1.51
NOD1Q9Y239 RNA5SP113-201ENST00000410486 84 ntBASIC5.59□□□□□ -1.51
NOD1Q9Y239 AC063979.1-201ENST00000415539 377 ntBASIC5.59□□□□□ -1.51
NOD1Q9Y239 PGBD4P6-201ENST00000421501 610 ntBASIC5.59□□□□□ -1.51
NOD1Q9Y239 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC5.59□□□□□ -1.51
NOD1Q9Y239 AC068287.1-201ENST00000430283 295 ntBASIC5.59□□□□□ -1.51
NOD1Q9Y239 AC133473.1-201ENST00000455173 299 ntBASIC5.59□□□□□ -1.51
NOD1Q9Y239 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC5.59□□□□□ -1.51
NOD1Q9Y239 snoU13.29-201ENST00000459370 104 ntBASIC5.59□□□□□ -1.51
NOD1Q9Y239 AC069499.1-201ENST00000489433 509 ntBASIC5.59□□□□□ -1.51
NOD1Q9Y239 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.59□□□□□ -1.51
NOD1Q9Y239 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC5.59□□□□□ -1.51
NOD1Q9Y239 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.59□□□□□ -1.51
NOD1Q9Y239 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC5.59□□□□□ -1.51
NOD1Q9Y239 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.59□□□□□ -1.51
NOD1Q9Y239 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.59□□□□□ -1.51
NOD1Q9Y239 LRRC37A5P-203ENST00000580181 585 ntBASIC5.59□□□□□ -1.51
NOD1Q9Y239 MIR4273-201ENST00000582824 84 ntBASIC5.59□□□□□ -1.51
NOD1Q9Y239 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.59□□□□□ -1.51
NOD1Q9Y239 MIR6780A-201ENST00000615089 68 ntBASIC5.59□□□□□ -1.51
NOD1Q9Y239 SNORD39.4-201ENST00000620099 78 ntBASIC5.59□□□□□ -1.51
NOD1Q9Y239 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NOD1Q9Y239 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
NOD1Q9Y239 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
NOD1Q9Y239 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.59□□□□□ -1.52
NOD1Q9Y239 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
NOD1Q9Y239 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
NOD1Q9Y239 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
NOD1Q9Y239 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
NOD1Q9Y239 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.59□□□□□ -1.52
NOD1Q9Y239 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NOD1Q9Y239 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NOD1Q9Y239 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
NOD1Q9Y239 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
NOD1Q9Y239 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.58□□□□□ -1.52
NOD1Q9Y239 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
NOD1Q9Y239 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.58□□□□□ -1.52
NOD1Q9Y239 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.58□□□□□ -1.52
NOD1Q9Y239 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NOD1Q9Y239 AC079741.1-201ENST00000321498 212 ntBASIC5.58□□□□□ -1.52
NOD1Q9Y239 Y_RNA.222-201ENST00000364264 102 ntBASIC5.58□□□□□ -1.52
NOD1Q9Y239 Y_RNA.350-201ENST00000365409 98 ntBASIC5.58□□□□□ -1.52
NOD1Q9Y239 SNORA62-201ENST00000365493 153 ntBASIC5.58□□□□□ -1.52
NOD1Q9Y239 Y_RNA.534-201ENST00000384599 112 ntBASIC5.58□□□□□ -1.52
NOD1Q9Y239 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
NOD1Q9Y239 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
NOD1Q9Y239 MIR298-201ENST00000401212 88 ntBASIC5.58□□□□□ -1.52
NOD1Q9Y239 U3.35-201ENST00000408405 208 ntBASIC5.58□□□□□ -1.52
NOD1Q9Y239 MIR1302-6-201ENST00000408466 90 ntBASIC5.58□□□□□ -1.52
NOD1Q9Y239 RN7SKP17-201ENST00000411242 351 ntBASIC5.58□□□□□ -1.52
NOD1Q9Y239 RNU6-607P-201ENST00000411283 108 ntBASIC5.58□□□□□ -1.52
NOD1Q9Y239 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.58□□□□□ -1.52
NOD1Q9Y239 UBE2D3P2-201ENST00000424409 445 ntBASIC5.58□□□□□ -1.52
NOD1Q9Y239 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NOD1Q9Y239 AC091390.1-201ENST00000433904 331 ntBASIC5.58□□□□□ -1.52
NOD1Q9Y239 RPS3AP12-201ENST00000443616 753 ntBASIC5.58□□□□□ -1.52
NOD1Q9Y239 CEACAMP6-201ENST00000452007 574 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms