Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 IFNWP4-201ENST00000453148 294 ntBASIC4.14□□□□□ -1.75
CDC42EP3Q9UKI2 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.14□□□□□ -1.75
CDC42EP3Q9UKI2 RPS27AP13-201ENST00000498403 237 ntBASIC4.14□□□□□ -1.75
CDC42EP3Q9UKI2 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.14□□□□□ -1.75
CDC42EP3Q9UKI2 AC104136.1-201ENST00000512969 394 ntBASIC4.14□□□□□ -1.75
CDC42EP3Q9UKI2 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.14□□□□□ -1.75
CDC42EP3Q9UKI2 Y_RNA.720-201ENST00000517166 92 ntBASIC4.14□□□□□ -1.75
CDC42EP3Q9UKI2 SNORA31.22-201ENST00000517204 135 ntBASIC4.14□□□□□ -1.75
CDC42EP3Q9UKI2 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.14□□□□□ -1.75
CDC42EP3Q9UKI2 CYCSP27-201ENST00000527643 293 ntBASIC4.14□□□□□ -1.75
CDC42EP3Q9UKI2 AC068446.3-201ENST00000555285 382 ntBASIC4.14□□□□□ -1.75
CDC42EP3Q9UKI2 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.14□□□□□ -1.75
CDC42EP3Q9UKI2 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.14□□□□□ -1.75
CDC42EP3Q9UKI2 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.14□□□□□ -1.75
CDC42EP3Q9UKI2 U73479.1-201ENST00000618062 168 ntBASIC4.14□□□□□ -1.75
CDC42EP3Q9UKI2 AC010378.1-201ENST00000619270 362 ntBASIC4.14□□□□□ -1.75
CDC42EP3Q9UKI2 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CDC42EP3Q9UKI2 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
CDC42EP3Q9UKI2 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.14□□□□□ -1.75
CDC42EP3Q9UKI2 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CDC42EP3Q9UKI2 AC139713.2-215ENST00000641428 5037 ntBASIC4.14□□□□□ -1.75
CDC42EP3Q9UKI2 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
CDC42EP3Q9UKI2 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.14□□□□□ -1.75
CDC42EP3Q9UKI2 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CDC42EP3Q9UKI2 AC099654.2-201ENST00000433031 1980 ntBASIC4.14□□□□□ -1.75
CDC42EP3Q9UKI2 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.14□□□□□ -1.75
CDC42EP3Q9UKI2 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CDC42EP3Q9UKI2 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 AL450345.1-202ENST00000605741 3881 ntBASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 SNORD3E-201ENST00000362899 217 ntBASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 Y_RNA.126-201ENST00000363382 111 ntBASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 RNU6-1040P-201ENST00000383974 107 ntBASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 RNU6-190P-201ENST00000384154 102 ntBASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 RNU6-817P-201ENST00000391083 104 ntBASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 AL080315.1-201ENST00000406055 466 ntBASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 AC092809.3-201ENST00000415453 231 ntBASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 AC113618.1-201ENST00000416747 285 ntBASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 BX510359.2-201ENST00000417920 305 ntBASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 AL139095.3-201ENST00000419672 1203 ntBASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 CKS1BP5-201ENST00000434172 273 ntBASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 IPO7P1-201ENST00000442031 636 ntBASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 AL035666.1-201ENST00000446195 348 ntBASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 AC010326.1-201ENST00000462726 602 ntBASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 AC117503.1-201ENST00000472241 394 ntBASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 VN1R105P-201ENST00000486595 910 ntBASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 HMGB3P16-201ENST00000508037 287 ntBASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 AC097473.1-201ENST00000508142 408 ntBASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 AC116337.1-201ENST00000509680 687 ntBASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 PTP4A1P4-201ENST00000512479 322 ntBASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 RNU6-390P-201ENST00000516259 103 ntBASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 RNU6-1016P-201ENST00000516689 94 ntBASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 RNU6-677P-201ENST00000516914 101 ntBASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 AC126177.3-201ENST00000551839 688 ntBASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 AC008814.1-201ENST00000603797 406 ntBASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 AC010205.1-201ENST00000616668 449 ntBASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 BX005214.3-202ENST00000619809 325 ntBASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 AL353748.2-201ENST00000622148 471 ntBASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 AC022418.1-201ENST00000624118 445 ntBASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 AL669831.3-213ENST00000636676 183 ntBASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 KPNA2P1-201ENST00000458289 1591 ntBASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 AL359922.3-201ENST00000624779 1670 ntBASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDC42EP3Q9UKI2 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
CDC42EP3Q9UKI2 AC090337.1-201ENST00000579651 2074 ntBASIC4.12□□□□□ -1.75
CDC42EP3Q9UKI2 SAMMSON-226ENST00000642089 1582 ntBASIC4.12□□□□□ -1.75
CDC42EP3Q9UKI2 Y_RNA.148-201ENST00000363557 117 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms