Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AC126118.1-201ENST00000607744 628 ntBASIC3.55□□□□□ -1.84
SIX4Q9UIU6 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.55□□□□□ -1.84
SIX4Q9UIU6 AC006329.2-201ENST00000611491 394 ntBASIC3.55□□□□□ -1.84
SIX4Q9UIU6 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.55□□□□□ -1.84
SIX4Q9UIU6 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.55□□□□□ -1.84
SIX4Q9UIU6 AL158801.5-201ENST00000623123 465 ntBASIC3.55□□□□□ -1.84
SIX4Q9UIU6 AC091925.2-201ENST00000625059 256 ntBASIC3.55□□□□□ -1.84
SIX4Q9UIU6 AC110994.2-201ENST00000635481 492 ntBASIC3.55□□□□□ -1.84
SIX4Q9UIU6 OR5AK4P-201ENST00000635912 903 ntBASIC3.55□□□□□ -1.84
SIX4Q9UIU6 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.55□□□□□ -1.84
SIX4Q9UIU6 MTND5P3-201ENST00000438536 1800 ntBASIC3.55□□□□□ -1.84
SIX4Q9UIU6 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SIX4Q9UIU6 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
SIX4Q9UIU6 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.55□□□□□ -1.84
SIX4Q9UIU6 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SIX4Q9UIU6 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
SIX4Q9UIU6 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.54□□□□□ -1.84
SIX4Q9UIU6 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SIX4Q9UIU6 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SIX4Q9UIU6 RNU6-263P-201ENST00000363811 107 ntBASIC3.54□□□□□ -1.84
SIX4Q9UIU6 RNU6-761P-201ENST00000384148 107 ntBASIC3.54□□□□□ -1.84
SIX4Q9UIU6 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SIX4Q9UIU6 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SIX4Q9UIU6 FCF1P10-201ENST00000407590 479 ntBASIC3.54□□□□□ -1.84
SIX4Q9UIU6 AL359704.1-201ENST00000411586 781 ntBASIC3.54□□□□□ -1.84
SIX4Q9UIU6 RAD23BP2-201ENST00000416003 1207 ntBASIC3.54□□□□□ -1.84
SIX4Q9UIU6 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.54□□□□□ -1.84
SIX4Q9UIU6 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.54□□□□□ -1.84
SIX4Q9UIU6 EZH2P1-201ENST00000431167 291 ntBASIC3.54□□□□□ -1.84
SIX4Q9UIU6 AC009961.2-201ENST00000435771 251 ntBASIC3.54□□□□□ -1.84
SIX4Q9UIU6 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.54□□□□□ -1.84
SIX4Q9UIU6 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.54□□□□□ -1.84
SIX4Q9UIU6 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.54□□□□□ -1.84
SIX4Q9UIU6 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.54□□□□□ -1.84
SIX4Q9UIU6 AC093392.2-201ENST00000450682 337 ntBASIC3.54□□□□□ -1.84
SIX4Q9UIU6 AL353691.1-201ENST00000451332 387 ntBASIC3.54□□□□□ -1.84
SIX4Q9UIU6 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SIX4Q9UIU6 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.54□□□□□ -1.84
SIX4Q9UIU6 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.54□□□□□ -1.84
SIX4Q9UIU6 AC005921.1-201ENST00000510589 286 ntBASIC3.54□□□□□ -1.84
SIX4Q9UIU6 AC091133.4-201ENST00000511142 308 ntBASIC3.54□□□□□ -1.84
SIX4Q9UIU6 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
SIX4Q9UIU6 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.54□□□□□ -1.84
SIX4Q9UIU6 RNU2-46P-201ENST00000517038 113 ntBASIC3.54□□□□□ -1.84
SIX4Q9UIU6 RNU4-60P-201ENST00000517239 135 ntBASIC3.54□□□□□ -1.84
SIX4Q9UIU6 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
SIX4Q9UIU6 AC022616.6-201ENST00000520479 119 ntBASIC3.54□□□□□ -1.84
SIX4Q9UIU6 NDUFB9P3-201ENST00000521269 501 ntBASIC3.54□□□□□ -1.84
SIX4Q9UIU6 OR5G4P-201ENST00000525251 760 ntBASIC3.54□□□□□ -1.84
SIX4Q9UIU6 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.54□□□□□ -1.84
SIX4Q9UIU6 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.54□□□□□ -1.84
SIX4Q9UIU6 EEF1B2P4-201ENST00000551398 348 ntBASIC3.54□□□□□ -1.84
SIX4Q9UIU6 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.54□□□□□ -1.84
SIX4Q9UIU6 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.54□□□□□ -1.84
SIX4Q9UIU6 AC015917.1-201ENST00000579654 510 ntBASIC3.54□□□□□ -1.84
SIX4Q9UIU6 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.54□□□□□ -1.84
SIX4Q9UIU6 AL359999.1-201ENST00000604513 294 ntBASIC3.54□□□□□ -1.84
SIX4Q9UIU6 AL365503.1-201ENST00000605247 905 ntBASIC3.54□□□□□ -1.84
SIX4Q9UIU6 AL391813.2-201ENST00000609113 322 ntBASIC3.54□□□□□ -1.84
SIX4Q9UIU6 AC096577.2-201ENST00000611455 153 ntBASIC3.54□□□□□ -1.84
SIX4Q9UIU6 AC091304.9-201ENST00000612091 226 ntBASIC3.54□□□□□ -1.84
SIX4Q9UIU6 RNVU1-4-201ENST00000612985 164 ntBASIC3.54□□□□□ -1.84
SIX4Q9UIU6 SNORD39.4-201ENST00000620099 78 ntBASIC3.54□□□□□ -1.84
SIX4Q9UIU6 AC079597.1-201ENST00000624306 508 ntBASIC3.54□□□□□ -1.84
SIX4Q9UIU6 AL160394.1-201ENST00000624765 724 ntBASIC3.54□□□□□ -1.84
SIX4Q9UIU6 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.54□□□□□ -1.84
SIX4Q9UIU6 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.54□□□□□ -1.84
SIX4Q9UIU6 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.54□□□□□ -1.84
SIX4Q9UIU6 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SIX4Q9UIU6 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SIX4Q9UIU6 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.53□□□□□ -1.84
SIX4Q9UIU6 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
SIX4Q9UIU6 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SIX4Q9UIU6 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
SIX4Q9UIU6 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SIX4Q9UIU6 MTND5P1-201ENST00000445440 1375 ntBASIC3.53□□□□□ -1.84
SIX4Q9UIU6 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.53□□□□□ -1.84
SIX4Q9UIU6 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SIX4Q9UIU6 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SIX4Q9UIU6 RNU6-97P-201ENST00000363387 104 ntBASIC3.53□□□□□ -1.84
SIX4Q9UIU6 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.53□□□□□ -1.84
SIX4Q9UIU6 CCNG1P1-201ENST00000406783 885 ntBASIC3.53□□□□□ -1.84
SIX4Q9UIU6 RNU6-55P-201ENST00000411092 107 ntBASIC3.53□□□□□ -1.84
SIX4Q9UIU6 RNU6-954P-201ENST00000411355 107 ntBASIC3.53□□□□□ -1.84
SIX4Q9UIU6 BX295541.1-201ENST00000417774 250 ntBASIC3.53□□□□□ -1.84
SIX4Q9UIU6 USP9YP36-201ENST00000424581 829 ntBASIC3.53□□□□□ -1.84
SIX4Q9UIU6 AL589872.1-201ENST00000426602 288 ntBASIC3.53□□□□□ -1.84
SIX4Q9UIU6 MTND1P1-201ENST00000445453 368 ntBASIC3.53□□□□□ -1.84
SIX4Q9UIU6 HMGN2P21-201ENST00000447764 270 ntBASIC3.53□□□□□ -1.84
SIX4Q9UIU6 AC104308.1-201ENST00000454621 333 ntBASIC3.53□□□□□ -1.84
SIX4Q9UIU6 BX510359.1-201ENST00000456973 237 ntBASIC3.53□□□□□ -1.84
SIX4Q9UIU6 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.53□□□□□ -1.84
SIX4Q9UIU6 RPL9P6-201ENST00000492764 598 ntBASIC3.53□□□□□ -1.84
SIX4Q9UIU6 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.53□□□□□ -1.84
SIX4Q9UIU6 COX7A2P2-201ENST00000505291 250 ntBASIC3.53□□□□□ -1.84
SIX4Q9UIU6 TMEM248P1-201ENST00000510579 951 ntBASIC3.53□□□□□ -1.84
SIX4Q9UIU6 RNU6-201P-201ENST00000517100 61 ntBASIC3.53□□□□□ -1.84
SIX4Q9UIU6 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.53□□□□□ -1.84
SIX4Q9UIU6 MTCO2P4-201ENST00000517968 247 ntBASIC3.53□□□□□ -1.84
SIX4Q9UIU6 MTND4LP26-201ENST00000518144 282 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms