Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 AC016769.3-201ENST00000396562 315 ntBASIC2.94□□□□□ -1.94
HOXC10Q9NYD6 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.94□□□□□ -1.94
HOXC10Q9NYD6 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.94□□□□□ -1.94
HOXC10Q9NYD6 RPL7P37-201ENST00000425095 738 ntBASIC2.94□□□□□ -1.94
HOXC10Q9NYD6 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC2.94□□□□□ -1.94
HOXC10Q9NYD6 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.94□□□□□ -1.94
HOXC10Q9NYD6 SEPT7P5-201ENST00000434048 306 ntBASIC2.94□□□□□ -1.94
HOXC10Q9NYD6 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.94□□□□□ -1.94
HOXC10Q9NYD6 AC129850.1-201ENST00000436203 508 ntBASIC2.94□□□□□ -1.94
HOXC10Q9NYD6 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.94□□□□□ -1.94
HOXC10Q9NYD6 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.94□□□□□ -1.94
HOXC10Q9NYD6 AL513124.1-201ENST00000450410 614 ntBASIC2.94□□□□□ -1.94
HOXC10Q9NYD6 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.94□□□□□ -1.94
HOXC10Q9NYD6 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
HOXC10Q9NYD6 RPL37P25-201ENST00000507308 276 ntBASIC2.94□□□□□ -1.94
HOXC10Q9NYD6 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.94□□□□□ -1.94
HOXC10Q9NYD6 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC2.94□□□□□ -1.94
HOXC10Q9NYD6 MIR3912-201ENST00000577566 105 ntBASIC2.94□□□□□ -1.94
HOXC10Q9NYD6 MIR4446-201ENST00000578505 67 ntBASIC2.94□□□□□ -1.94
HOXC10Q9NYD6 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.94□□□□□ -1.94
HOXC10Q9NYD6 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.94□□□□□ -1.94
HOXC10Q9NYD6 AL035411.2-201ENST00000604022 421 ntBASIC2.94□□□□□ -1.94
HOXC10Q9NYD6 AC092954.1-201ENST00000609121 445 ntBASIC2.94□□□□□ -1.94
HOXC10Q9NYD6 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
HOXC10Q9NYD6 AP005901.5-201ENST00000545779 1796 ntBASIC2.94□□□□□ -1.94
HOXC10Q9NYD6 AC008568.2-201ENST00000623862 2313 ntBASIC2.93□□□□□ -1.94
HOXC10Q9NYD6 RNU5E-10P-201ENST00000363506 118 ntBASIC2.93□□□□□ -1.94
HOXC10Q9NYD6 RNU1-100P-201ENST00000365255 165 ntBASIC2.93□□□□□ -1.94
HOXC10Q9NYD6 MIR767-201ENST00000390228 109 ntBASIC2.93□□□□□ -1.94
HOXC10Q9NYD6 RNU6-1176P-201ENST00000390955 107 ntBASIC2.93□□□□□ -1.94
HOXC10Q9NYD6 MIR1290-201ENST00000408735 78 ntBASIC2.93□□□□□ -1.94
HOXC10Q9NYD6 RNU2-28P-201ENST00000410457 189 ntBASIC2.93□□□□□ -1.94
HOXC10Q9NYD6 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.93□□□□□ -1.94
HOXC10Q9NYD6 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HOXC10Q9NYD6 AC093155.1-201ENST00000440164 826 ntBASIC2.93□□□□□ -1.94
HOXC10Q9NYD6 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
HOXC10Q9NYD6 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HOXC10Q9NYD6 MTND4LP3-201ENST00000468320 276 ntBASIC2.93□□□□□ -1.94
HOXC10Q9NYD6 YWHAEP4-201ENST00000505390 198 ntBASIC2.93□□□□□ -1.94
HOXC10Q9NYD6 CDC42P4-201ENST00000510507 563 ntBASIC2.93□□□□□ -1.94
HOXC10Q9NYD6 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.93□□□□□ -1.94
HOXC10Q9NYD6 MTND5P4-201ENST00000514978 288 ntBASIC2.93□□□□□ -1.94
HOXC10Q9NYD6 AC100870.1-201ENST00000522035 505 ntBASIC2.93□□□□□ -1.94
HOXC10Q9NYD6 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.93□□□□□ -1.94
HOXC10Q9NYD6 AP001189.2-201ENST00000527320 189 ntBASIC2.93□□□□□ -1.94
HOXC10Q9NYD6 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.93□□□□□ -1.94
HOXC10Q9NYD6 AL133271.1-201ENST00000538229 291 ntBASIC2.93□□□□□ -1.94
HOXC10Q9NYD6 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC2.93□□□□□ -1.94
HOXC10Q9NYD6 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.93□□□□□ -1.94
HOXC10Q9NYD6 AC008127.2-201ENST00000549925 1075 ntBASIC2.93□□□□□ -1.94
HOXC10Q9NYD6 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.93□□□□□ -1.94
HOXC10Q9NYD6 MIR5708-201ENST00000579723 85 ntBASIC2.93□□□□□ -1.94
HOXC10Q9NYD6 AL022067.1-201ENST00000602426 454 ntBASIC2.93□□□□□ -1.94
HOXC10Q9NYD6 AL445435.1-201ENST00000604232 665 ntBASIC2.93□□□□□ -1.94
HOXC10Q9NYD6 AC112220.2-201ENST00000605513 533 ntBASIC2.93□□□□□ -1.94
HOXC10Q9NYD6 AC123767.1-202ENST00000620407 817 ntBASIC2.93□□□□□ -1.94
HOXC10Q9NYD6 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.93□□□□□ -1.94
HOXC10Q9NYD6 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
HOXC10Q9NYD6 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HOXC10Q9NYD6 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HOXC10Q9NYD6 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
HOXC10Q9NYD6 ZNF658B-202ENST00000615961 3375 ntBASIC2.92□□□□□ -1.94
HOXC10Q9NYD6 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
HOXC10Q9NYD6 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
HOXC10Q9NYD6 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.92□□□□□ -1.94
HOXC10Q9NYD6 MIR518C-201ENST00000384822 101 ntBASIC2.92□□□□□ -1.94
HOXC10Q9NYD6 MIR592-201ENST00000384959 97 ntBASIC2.92□□□□□ -1.94
HOXC10Q9NYD6 TAS2R15P-201ENST00000390674 928 ntBASIC2.92□□□□□ -1.94
HOXC10Q9NYD6 SNORA3.2-201ENST00000408221 125 ntBASIC2.92□□□□□ -1.94
HOXC10Q9NYD6 RNU4-53P-201ENST00000410828 140 ntBASIC2.92□□□□□ -1.94
HOXC10Q9NYD6 AC007435.1-201ENST00000421086 415 ntBASIC2.92□□□□□ -1.94
HOXC10Q9NYD6 GTF2IP3-201ENST00000433887 494 ntBASIC2.92□□□□□ -1.94
HOXC10Q9NYD6 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.92□□□□□ -1.94
HOXC10Q9NYD6 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.92□□□□□ -1.94
HOXC10Q9NYD6 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.92□□□□□ -1.94
HOXC10Q9NYD6 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.92□□□□□ -1.94
HOXC10Q9NYD6 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.92□□□□□ -1.94
HOXC10Q9NYD6 SNORA70.16-201ENST00000516390 95 ntBASIC2.92□□□□□ -1.94
HOXC10Q9NYD6 SNORA31.18-201ENST00000517043 134 ntBASIC2.92□□□□□ -1.94
HOXC10Q9NYD6 RNU1-104P-201ENST00000517280 175 ntBASIC2.92□□□□□ -1.94
HOXC10Q9NYD6 AC087808.1-201ENST00000520501 361 ntBASIC2.92□□□□□ -1.94
HOXC10Q9NYD6 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.92□□□□□ -1.94
HOXC10Q9NYD6 HSPE1P3-201ENST00000559254 309 ntBASIC2.92□□□□□ -1.94
HOXC10Q9NYD6 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.92□□□□□ -1.94
HOXC10Q9NYD6 BNIP3P24-201ENST00000593398 557 ntBASIC2.92□□□□□ -1.94
HOXC10Q9NYD6 AL138478.1-201ENST00000612252 832 ntBASIC2.92□□□□□ -1.94
HOXC10Q9NYD6 AC005332.6-201ENST00000613178 446 ntBASIC2.92□□□□□ -1.94
HOXC10Q9NYD6 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.92□□□□□ -1.94
HOXC10Q9NYD6 AL353748.2-201ENST00000622148 471 ntBASIC2.92□□□□□ -1.94
HOXC10Q9NYD6 AC010297.1-201ENST00000623948 149 ntBASIC2.92□□□□□ -1.94
HOXC10Q9NYD6 AC091925.2-201ENST00000625059 256 ntBASIC2.92□□□□□ -1.94
HOXC10Q9NYD6 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
HOXC10Q9NYD6 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.92□□□□□ -1.94
HOXC10Q9NYD6 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
HOXC10Q9NYD6 AC093536.2-201ENST00000565257 1406 ntBASIC2.92□□□□□ -1.94
HOXC10Q9NYD6 Z99496.1-201ENST00000469424 1477 ntBASIC2.91□□□□□ -1.94
HOXC10Q9NYD6 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
HOXC10Q9NYD6 RNA5SP289-201ENST00000362332 137 ntBASIC2.91□□□□□ -1.94
HOXC10Q9NYD6 U8.2-201ENST00000363156 134 ntBASIC2.91□□□□□ -1.94
HOXC10Q9NYD6 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms