Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 RNU6-858P-201ENST00000362436 107 ntBASIC7.03□□□□□ -1.28
RTN4Q9NQC3 SNORD1C-201ENST00000363315 78 ntBASIC7.03□□□□□ -1.28
RTN4Q9NQC3 RNA5SP478-201ENST00000364657 115 ntBASIC7.03□□□□□ -1.28
RTN4Q9NQC3 AC074375.1-201ENST00000372993 192 ntBASIC7.03□□□□□ -1.28
RTN4Q9NQC3 RNU6-1286P-201ENST00000383871 107 ntBASIC7.03□□□□□ -1.28
RTN4Q9NQC3 AL136100.1-201ENST00000407696 330 ntBASIC7.03□□□□□ -1.28
RTN4Q9NQC3 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC7.03□□□□□ -1.28
RTN4Q9NQC3 AC074117.2-201ENST00000417130 397 ntBASIC7.03□□□□□ -1.28
RTN4Q9NQC3 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC7.03□□□□□ -1.28
RTN4Q9NQC3 HMGN2P10-201ENST00000448085 265 ntBASIC7.03□□□□□ -1.28
RTN4Q9NQC3 AL353705.4-201ENST00000449661 238 ntBASIC7.03□□□□□ -1.28
RTN4Q9NQC3 TEX41-209ENST00000451478 452 ntTSL 2 BASIC7.03□□□□□ -1.28
RTN4Q9NQC3 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
RTN4Q9NQC3 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC7.03□□□□□ -1.28
RTN4Q9NQC3 ANXA2P1-201ENST00000505539 926 ntBASIC7.03□□□□□ -1.28
RTN4Q9NQC3 AC109329.1-201ENST00000518744 317 ntBASIC7.03□□□□□ -1.28
RTN4Q9NQC3 IGHVII-53-1-201ENST00000519538 255 ntBASIC7.03□□□□□ -1.28
RTN4Q9NQC3 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC7.03□□□□□ -1.28
RTN4Q9NQC3 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RTN4Q9NQC3 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC7.03□□□□□ -1.28
RTN4Q9NQC3 GNG2-203ENST00000553432 577 ntTSL 4 BASIC7.03□□□□□ -1.28
RTN4Q9NQC3 AL442163.3-201ENST00000554110 156 ntBASIC7.03□□□□□ -1.28
RTN4Q9NQC3 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC7.03□□□□□ -1.28
RTN4Q9NQC3 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
RTN4Q9NQC3 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC7.03□□□□□ -1.28
RTN4Q9NQC3 DLST-216ENST00000626051 252 ntTSL 5 BASIC7.03□□□□□ -1.28
RTN4Q9NQC3 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RTN4Q9NQC3 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC7.03□□□□□ -1.28
RTN4Q9NQC3 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RTN4Q9NQC3 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RTN4Q9NQC3 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RTN4Q9NQC3 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RTN4Q9NQC3 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
RTN4Q9NQC3 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC7.02□□□□□ -1.29
RTN4Q9NQC3 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
RTN4Q9NQC3 SNORD115-32-201ENST00000364079 82 ntBASIC7.02□□□□□ -1.29
RTN4Q9NQC3 SNORA70.6-201ENST00000383934 134 ntBASIC7.02□□□□□ -1.29
RTN4Q9NQC3 RNU6-611P-201ENST00000384276 104 ntBASIC7.02□□□□□ -1.29
RTN4Q9NQC3 MIR708-201ENST00000390708 88 ntBASIC7.02□□□□□ -1.29
RTN4Q9NQC3 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
RTN4Q9NQC3 AL035079.1-201ENST00000405210 287 ntBASIC7.02□□□□□ -1.29
RTN4Q9NQC3 RNA5SP44-201ENST00000410446 133 ntBASIC7.02□□□□□ -1.29
RTN4Q9NQC3 PPIAP23-201ENST00000420099 497 ntBASIC7.02□□□□□ -1.29
RTN4Q9NQC3 RPL21P40-201ENST00000428586 483 ntBASIC7.02□□□□□ -1.29
RTN4Q9NQC3 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
RTN4Q9NQC3 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC7.02□□□□□ -1.29
RTN4Q9NQC3 AC243964.1-201ENST00000441814 261 ntBASIC7.02□□□□□ -1.29
RTN4Q9NQC3 MRPL42P6-201ENST00000486397 371 ntBASIC7.02□□□□□ -1.29
RTN4Q9NQC3 RN7SKP260-201ENST00000516907 149 ntBASIC7.02□□□□□ -1.29
RTN4Q9NQC3 RNA5SP230-201ENST00000517039 122 ntBASIC7.02□□□□□ -1.29
RTN4Q9NQC3 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC7.02□□□□□ -1.29
RTN4Q9NQC3 MIR3199-2-201ENST00000636243 86 ntBASIC7.02□□□□□ -1.29
RTN4Q9NQC3 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
RTN4Q9NQC3 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
RTN4Q9NQC3 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC7.02□□□□□ -1.29
RTN4Q9NQC3 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC7.01□□□□□ -1.29
RTN4Q9NQC3 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
RTN4Q9NQC3 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
RTN4Q9NQC3 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC7.01□□□□□ -1.29
RTN4Q9NQC3 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
RTN4Q9NQC3 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
RTN4Q9NQC3 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC7.01□□□□□ -1.29
RTN4Q9NQC3 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
RTN4Q9NQC3 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC7.01□□□□□ -1.29
RTN4Q9NQC3 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
RTN4Q9NQC3 RNA5SP355-201ENST00000365317 135 ntBASIC7.01□□□□□ -1.29
RTN4Q9NQC3 RNU6-1318P-201ENST00000365389 103 ntBASIC7.01□□□□□ -1.29
RTN4Q9NQC3 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC7.01□□□□□ -1.29
RTN4Q9NQC3 AHCYP8-201ENST00000425108 209 ntBASIC7.01□□□□□ -1.29
RTN4Q9NQC3 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC7.01□□□□□ -1.29
RTN4Q9NQC3 AL929410.2-201ENST00000451170 189 ntBASIC7.01□□□□□ -1.29
RTN4Q9NQC3 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC7.01□□□□□ -1.29
RTN4Q9NQC3 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC7.01□□□□□ -1.29
RTN4Q9NQC3 AC074255.1-201ENST00000511259 501 ntBASIC7.01□□□□□ -1.29
RTN4Q9NQC3 AC093840.1-201ENST00000511599 336 ntBASIC7.01□□□□□ -1.29
RTN4Q9NQC3 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC7.01□□□□□ -1.29
RTN4Q9NQC3 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC7.01□□□□□ -1.29
RTN4Q9NQC3 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC7.01□□□□□ -1.29
RTN4Q9NQC3 AC026956.1-201ENST00000558741 396 ntBASIC7.01□□□□□ -1.29
RTN4Q9NQC3 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC7.01□□□□□ -1.29
RTN4Q9NQC3 MIR3189-201ENST00000578735 73 ntBASIC7.01□□□□□ -1.29
RTN4Q9NQC3 AC060780.2-201ENST00000589047 198 ntBASIC7.01□□□□□ -1.29
RTN4Q9NQC3 B3GNTL1P2-201ENST00000603673 288 ntBASIC7.01□□□□□ -1.29
RTN4Q9NQC3 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC7.01□□□□□ -1.29
RTN4Q9NQC3 AL138880.2-201ENST00000616214 239 ntBASIC7.01□□□□□ -1.29
RTN4Q9NQC3 AC130454.1-201ENST00000622948 401 ntBASIC7.01□□□□□ -1.29
RTN4Q9NQC3 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC7.01□□□□□ -1.29
RTN4Q9NQC3 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC7.01□□□□□ -1.29
RTN4Q9NQC3 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
RTN4Q9NQC3 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
RTN4Q9NQC3 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
RTN4Q9NQC3 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
RTN4Q9NQC3 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC7□□□□□ -1.29
RTN4Q9NQC3 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC7□□□□□ -1.29
RTN4Q9NQC3 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC7□□□□□ -1.29
RTN4Q9NQC3 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC7□□□□□ -1.29
RTN4Q9NQC3 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
RTN4Q9NQC3 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC7□□□□□ -1.29
RTN4Q9NQC3 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC7□□□□□ -1.29
RTN4Q9NQC3 RNA5SP382-201ENST00000363355 112 ntBASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms