Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.18□□□□□ -1.74
SEC61A2Q9H9S3 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.18□□□□□ -1.74
SEC61A2Q9H9S3 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.18□□□□□ -1.74
SEC61A2Q9H9S3 HMGB3P21-201ENST00000452483 547 ntBASIC4.18□□□□□ -1.74
SEC61A2Q9H9S3 NIP7P2-201ENST00000485801 544 ntBASIC4.18□□□□□ -1.74
SEC61A2Q9H9S3 RN7SL283P-201ENST00000489055 303 ntBASIC4.18□□□□□ -1.74
SEC61A2Q9H9S3 AP002812.1-201ENST00000495378 474 ntBASIC4.18□□□□□ -1.74
SEC61A2Q9H9S3 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.18□□□□□ -1.74
SEC61A2Q9H9S3 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.18□□□□□ -1.74
SEC61A2Q9H9S3 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.18□□□□□ -1.74
SEC61A2Q9H9S3 AP002404.1-201ENST00000532005 451 ntBASIC4.18□□□□□ -1.74
SEC61A2Q9H9S3 AL121576.1-201ENST00000556055 276 ntBASIC4.18□□□□□ -1.74
SEC61A2Q9H9S3 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.18□□□□□ -1.74
SEC61A2Q9H9S3 AC007566.2-201ENST00000603642 413 ntBASIC4.18□□□□□ -1.74
SEC61A2Q9H9S3 PLCE1P1-201ENST00000622094 305 ntBASIC4.18□□□□□ -1.74
SEC61A2Q9H9S3 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.18□□□□□ -1.74
SEC61A2Q9H9S3 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
SEC61A2Q9H9S3 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SEC61A2Q9H9S3 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
SEC61A2Q9H9S3 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
SEC61A2Q9H9S3 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.18□□□□□ -1.74
SEC61A2Q9H9S3 AC108751.5-201ENST00000492880 1336 ntBASIC4.18□□□□□ -1.74
SEC61A2Q9H9S3 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.18□□□□□ -1.74
SEC61A2Q9H9S3 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.18□□□□□ -1.74
SEC61A2Q9H9S3 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
SEC61A2Q9H9S3 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SEC61A2Q9H9S3 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
SEC61A2Q9H9S3 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
SEC61A2Q9H9S3 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
SEC61A2Q9H9S3 EXOC5P1-201ENST00000510543 1969 ntBASIC4.17□□□□□ -1.74
SEC61A2Q9H9S3 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
SEC61A2Q9H9S3 XIAPP3-201ENST00000312918 795 ntBASIC4.17□□□□□ -1.74
SEC61A2Q9H9S3 SNORA63.7-201ENST00000365579 123 ntBASIC4.17□□□□□ -1.74
SEC61A2Q9H9S3 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SEC61A2Q9H9S3 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SEC61A2Q9H9S3 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SEC61A2Q9H9S3 RNU6-946P-201ENST00000383878 107 ntBASIC4.17□□□□□ -1.74
SEC61A2Q9H9S3 RNU6-637P-201ENST00000384050 107 ntBASIC4.17□□□□□ -1.74
SEC61A2Q9H9S3 ENSAP1-201ENST00000392855 326 ntBASIC4.17□□□□□ -1.74
SEC61A2Q9H9S3 RPL21P24-201ENST00000413752 448 ntBASIC4.17□□□□□ -1.74
SEC61A2Q9H9S3 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.17□□□□□ -1.74
SEC61A2Q9H9S3 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.17□□□□□ -1.74
SEC61A2Q9H9S3 SNAP23P1-201ENST00000433229 246 ntBASIC4.17□□□□□ -1.74
SEC61A2Q9H9S3 RPL35AP22-201ENST00000436855 335 ntBASIC4.17□□□□□ -1.74
SEC61A2Q9H9S3 GSTA11P-201ENST00000452866 669 ntBASIC4.17□□□□□ -1.74
SEC61A2Q9H9S3 AC079168.2-201ENST00000453977 416 ntBASIC4.17□□□□□ -1.74
SEC61A2Q9H9S3 AC007967.1-201ENST00000455422 1159 ntBASIC4.17□□□□□ -1.74
SEC61A2Q9H9S3 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.17□□□□□ -1.74
SEC61A2Q9H9S3 AC008897.1-201ENST00000494006 347 ntBASIC4.17□□□□□ -1.74
SEC61A2Q9H9S3 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.17□□□□□ -1.74
SEC61A2Q9H9S3 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.17□□□□□ -1.74
SEC61A2Q9H9S3 RNU6-120P-201ENST00000516077 103 ntBASIC4.17□□□□□ -1.74
SEC61A2Q9H9S3 RN7SKP276-201ENST00000516242 268 ntBASIC4.17□□□□□ -1.74
SEC61A2Q9H9S3 Y_RNA.670-201ENST00000516255 105 ntBASIC4.17□□□□□ -1.74
SEC61A2Q9H9S3 RNU6-635P-201ENST00000516651 102 ntBASIC4.17□□□□□ -1.74
SEC61A2Q9H9S3 RNU6-1332P-201ENST00000516666 104 ntBASIC4.17□□□□□ -1.74
SEC61A2Q9H9S3 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.17□□□□□ -1.74
SEC61A2Q9H9S3 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
SEC61A2Q9H9S3 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.17□□□□□ -1.74
SEC61A2Q9H9S3 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.17□□□□□ -1.74
SEC61A2Q9H9S3 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.17□□□□□ -1.74
SEC61A2Q9H9S3 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.17□□□□□ -1.74
SEC61A2Q9H9S3 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.17□□□□□ -1.74
SEC61A2Q9H9S3 AC091042.1-201ENST00000579213 173 ntBASIC4.17□□□□□ -1.74
SEC61A2Q9H9S3 MIR5692C1-201ENST00000585309 91 ntBASIC4.17□□□□□ -1.74
SEC61A2Q9H9S3 AL669831.4-202ENST00000590817 238 ntBASIC4.17□□□□□ -1.74
SEC61A2Q9H9S3 AL391358.1-201ENST00000605342 190 ntBASIC4.17□□□□□ -1.74
SEC61A2Q9H9S3 AC006329.2-201ENST00000611491 394 ntBASIC4.17□□□□□ -1.74
SEC61A2Q9H9S3 AC116447.1-201ENST00000613153 453 ntBASIC4.17□□□□□ -1.74
SEC61A2Q9H9S3 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC4.17□□□□□ -1.74
SEC61A2Q9H9S3 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.17□□□□□ -1.74
SEC61A2Q9H9S3 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SEC61A2Q9H9S3 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SEC61A2Q9H9S3 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
SEC61A2Q9H9S3 AL031119.1-201ENST00000404707 1879 ntBASIC4.17□□□□□ -1.74
SEC61A2Q9H9S3 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SEC61A2Q9H9S3 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SEC61A2Q9H9S3 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SEC61A2Q9H9S3 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SEC61A2Q9H9S3 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.17□□□□□ -1.74
SEC61A2Q9H9S3 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 AL445437.1-201ENST00000623157 3087 ntBASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 MTCO1P24-201ENST00000515438 1558 ntBASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 AL590240.1-201ENST00000334118 313 ntBASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 SNORD3E-201ENST00000362899 217 ntBASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 RNVU1-6-201ENST00000364688 164 ntBASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 SMIM11P1-201ENST00000369586 178 ntBASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 SNORD51-201ENST00000384320 80 ntBASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 SNORA16.2-201ENST00000390991 127 ntBASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 AL590762.2-201ENST00000395798 571 ntBASIC4.16□□□□□ -1.74
SEC61A2Q9H9S3 AL109755.1-201ENST00000401791 649 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 162.9 ms