Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
EBF3Q9H4W6 AL050343.2-201ENST00000607338 280 ntBASIC3.85□□□□□ -1.79
EBF3Q9H4W6 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.85□□□□□ -1.79
EBF3Q9H4W6 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.85□□□□□ -1.79
EBF3Q9H4W6 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
EBF3Q9H4W6 MIR6864-201ENST00000617935 70 ntBASIC3.85□□□□□ -1.79
EBF3Q9H4W6 AC079684.1-201ENST00000621405 437 ntBASIC3.85□□□□□ -1.79
EBF3Q9H4W6 AC009268.2-201ENST00000621925 457 ntBASIC3.85□□□□□ -1.79
EBF3Q9H4W6 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.85□□□□□ -1.79
EBF3Q9H4W6 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.85□□□□□ -1.79
EBF3Q9H4W6 SAGE4P-201ENST00000442271 3381 ntBASIC3.85□□□□□ -1.79
EBF3Q9H4W6 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.85□□□□□ -1.79
EBF3Q9H4W6 AP002907.1-201ENST00000606361 1430 ntBASIC3.85□□□□□ -1.79
EBF3Q9H4W6 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
EBF3Q9H4W6 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
EBF3Q9H4W6 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.84□□□□□ -1.79
EBF3Q9H4W6 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
EBF3Q9H4W6 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
EBF3Q9H4W6 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
EBF3Q9H4W6 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.84□□□□□ -1.79
EBF3Q9H4W6 AC011978.2-201ENST00000569835 2054 ntBASIC3.84□□□□□ -1.79
EBF3Q9H4W6 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.84□□□□□ -1.79
EBF3Q9H4W6 OR5J1P-201ENST00000313544 939 ntBASIC3.84□□□□□ -1.79
EBF3Q9H4W6 RPL23AP57-201ENST00000332361 466 ntBASIC3.84□□□□□ -1.79
EBF3Q9H4W6 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
EBF3Q9H4W6 SNORD56.2-201ENST00000363242 71 ntBASIC3.84□□□□□ -1.79
EBF3Q9H4W6 RNA5SP391-201ENST00000363456 119 ntBASIC3.84□□□□□ -1.79
EBF3Q9H4W6 Y_RNA.142-201ENST00000363491 102 ntBASIC3.84□□□□□ -1.79
EBF3Q9H4W6 RNU6-525P-201ENST00000363685 104 ntBASIC3.84□□□□□ -1.79
EBF3Q9H4W6 ARF4P3-201ENST00000397387 509 ntBASIC3.84□□□□□ -1.79
EBF3Q9H4W6 MIR320C1-201ENST00000408566 88 ntBASIC3.84□□□□□ -1.79
EBF3Q9H4W6 RNU6-908P-201ENST00000410160 94 ntBASIC3.84□□□□□ -1.79
EBF3Q9H4W6 TPMTP2-201ENST00000414372 726 ntBASIC3.84□□□□□ -1.79
EBF3Q9H4W6 AC127526.1-201ENST00000417526 366 ntBASIC3.84□□□□□ -1.79
EBF3Q9H4W6 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.84□□□□□ -1.79
EBF3Q9H4W6 AP000907.1-201ENST00000428428 510 ntBASIC3.84□□□□□ -1.79
EBF3Q9H4W6 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.84□□□□□ -1.79
EBF3Q9H4W6 AL159987.2-201ENST00000432754 307 ntBASIC3.84□□□□□ -1.79
EBF3Q9H4W6 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.84□□□□□ -1.79
EBF3Q9H4W6 MTND1P18-201ENST00000448191 573 ntBASIC3.84□□□□□ -1.79
EBF3Q9H4W6 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.84□□□□□ -1.79
EBF3Q9H4W6 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.84□□□□□ -1.79
EBF3Q9H4W6 AC087879.1-201ENST00000474343 374 ntBASIC3.84□□□□□ -1.79
EBF3Q9H4W6 MTND1P3-201ENST00000484956 952 ntBASIC3.84□□□□□ -1.79
EBF3Q9H4W6 AC090453.1-201ENST00000495560 436 ntBASIC3.84□□□□□ -1.79
EBF3Q9H4W6 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.84□□□□□ -1.79
EBF3Q9H4W6 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.84□□□□□ -1.79
EBF3Q9H4W6 RNA5SP208-201ENST00000516156 78 ntBASIC3.84□□□□□ -1.79
EBF3Q9H4W6 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.84□□□□□ -1.79
EBF3Q9H4W6 AC093027.1-201ENST00000546698 429 ntBASIC3.84□□□□□ -1.79
EBF3Q9H4W6 AP001180.3-201ENST00000582221 145 ntBASIC3.84□□□□□ -1.79
EBF3Q9H4W6 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.84□□□□□ -1.79
EBF3Q9H4W6 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.84□□□□□ -1.79
EBF3Q9H4W6 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.84□□□□□ -1.79
EBF3Q9H4W6 AC010591.1-201ENST00000603941 649 ntBASIC3.84□□□□□ -1.79
EBF3Q9H4W6 MIR7975-201ENST00000619350 68 ntBASIC3.84□□□□□ -1.79
EBF3Q9H4W6 PISRT1-201ENST00000626175 531 ntBASIC3.84□□□□□ -1.79
EBF3Q9H4W6 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.84□□□□□ -1.79
EBF3Q9H4W6 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.84□□□□□ -1.79
EBF3Q9H4W6 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
EBF3Q9H4W6 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
EBF3Q9H4W6 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.8
EBF3Q9H4W6 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.8
EBF3Q9H4W6 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
EBF3Q9H4W6 XIAPP3-201ENST00000312918 795 ntBASIC3.83□□□□□ -1.8
EBF3Q9H4W6 AC007685.1-201ENST00000329806 452 ntBASIC3.83□□□□□ -1.8
EBF3Q9H4W6 Y_RNA.86-201ENST00000363020 111 ntBASIC3.83□□□□□ -1.8
EBF3Q9H4W6 RNU6-1085P-201ENST00000363576 107 ntBASIC3.83□□□□□ -1.8
EBF3Q9H4W6 Y_RNA.162-201ENST00000363683 102 ntBASIC3.83□□□□□ -1.8
EBF3Q9H4W6 RNVU1-14-201ENST00000384770 164 ntBASIC3.83□□□□□ -1.8
EBF3Q9H4W6 MIR491-201ENST00000384877 84 ntBASIC3.83□□□□□ -1.8
EBF3Q9H4W6 RNU6-952P-201ENST00000391164 108 ntBASIC3.83□□□□□ -1.8
EBF3Q9H4W6 PTMAP5-201ENST00000393073 333 ntBASIC3.83□□□□□ -1.8
EBF3Q9H4W6 EIF5P1-201ENST00000400019 1231 ntBASIC3.83□□□□□ -1.8
EBF3Q9H4W6 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.83□□□□□ -1.8
EBF3Q9H4W6 AL359704.1-201ENST00000411586 781 ntBASIC3.83□□□□□ -1.8
EBF3Q9H4W6 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.83□□□□□ -1.8
EBF3Q9H4W6 PDCL2P1-201ENST00000419302 352 ntBASIC3.83□□□□□ -1.8
EBF3Q9H4W6 ZNF90P2-204ENST00000419323 1075 ntBASIC3.83□□□□□ -1.8
EBF3Q9H4W6 AF228730.4-201ENST00000421457 183 ntBASIC3.83□□□□□ -1.8
EBF3Q9H4W6 AL589872.1-201ENST00000426602 288 ntBASIC3.83□□□□□ -1.8
EBF3Q9H4W6 FCF1P1-201ENST00000432690 571 ntBASIC3.83□□□□□ -1.8
EBF3Q9H4W6 AC073063.1-201ENST00000434352 607 ntBASIC3.83□□□□□ -1.8
EBF3Q9H4W6 AC002486.1-201ENST00000435098 391 ntBASIC3.83□□□□□ -1.8
EBF3Q9H4W6 RPL23AP74-201ENST00000437246 471 ntBASIC3.83□□□□□ -1.8
EBF3Q9H4W6 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.83□□□□□ -1.8
EBF3Q9H4W6 RPL21P23-201ENST00000446654 460 ntBASIC3.83□□□□□ -1.8
EBF3Q9H4W6 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.83□□□□□ -1.8
EBF3Q9H4W6 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.83□□□□□ -1.8
EBF3Q9H4W6 MTCO1P42-201ENST00000457379 726 ntBASIC3.83□□□□□ -1.8
EBF3Q9H4W6 RNU6-420P-201ENST00000458780 107 ntBASIC3.83□□□□□ -1.8
EBF3Q9H4W6 RPL31P50-201ENST00000471002 296 ntBASIC3.83□□□□□ -1.8
EBF3Q9H4W6 AC017015.1-201ENST00000477387 286 ntBASIC3.83□□□□□ -1.8
EBF3Q9H4W6 FAM172BP-201ENST00000487497 1089 ntBASIC3.83□□□□□ -1.8
EBF3Q9H4W6 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.83□□□□□ -1.8
EBF3Q9H4W6 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.83□□□□□ -1.8
EBF3Q9H4W6 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.83□□□□□ -1.8
EBF3Q9H4W6 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.83□□□□□ -1.8
EBF3Q9H4W6 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.83□□□□□ -1.8
EBF3Q9H4W6 AC104057.1-201ENST00000515547 497 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms