Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.82□□□□□ -1.8
USP44Q9H0E7 AL356266.1-201ENST00000623311 483 ntBASIC3.82□□□□□ -1.8
USP44Q9H0E7 AL159972.1-201ENST00000625150 448 ntBASIC3.82□□□□□ -1.8
USP44Q9H0E7 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
USP44Q9H0E7 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.82□□□□□ -1.8
USP44Q9H0E7 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.82□□□□□ -1.8
USP44Q9H0E7 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
USP44Q9H0E7 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.81□□□□□ -1.8
USP44Q9H0E7 CCT4P2-201ENST00000233836 1548 ntBASIC3.81□□□□□ -1.8
USP44Q9H0E7 AC004972.1-201ENST00000623934 2209 ntBASIC3.81□□□□□ -1.8
USP44Q9H0E7 DEFB108F-201ENST00000344638 222 ntBASIC3.81□□□□□ -1.8
USP44Q9H0E7 U3.6-201ENST00000363622 211 ntBASIC3.81□□□□□ -1.8
USP44Q9H0E7 RNU4-91P-201ENST00000364778 135 ntBASIC3.81□□□□□ -1.8
USP44Q9H0E7 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
USP44Q9H0E7 U8.14-201ENST00000390843 143 ntBASIC3.81□□□□□ -1.8
USP44Q9H0E7 MIR1290-201ENST00000408735 78 ntBASIC3.81□□□□□ -1.8
USP44Q9H0E7 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
USP44Q9H0E7 AC109780.2-201ENST00000413467 845 ntBASIC3.81□□□□□ -1.8
USP44Q9H0E7 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.81□□□□□ -1.8
USP44Q9H0E7 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.81□□□□□ -1.8
USP44Q9H0E7 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.81□□□□□ -1.8
USP44Q9H0E7 AL445669.1-201ENST00000426743 755 ntBASIC3.81□□□□□ -1.8
USP44Q9H0E7 MTND4P32-201ENST00000437189 1237 ntBASIC3.81□□□□□ -1.8
USP44Q9H0E7 LARP1BP3-201ENST00000437229 869 ntBASIC3.81□□□□□ -1.8
USP44Q9H0E7 RPL23AP22-201ENST00000437556 453 ntBASIC3.81□□□□□ -1.8
USP44Q9H0E7 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.81□□□□□ -1.8
USP44Q9H0E7 AC117440.1-201ENST00000474107 571 ntBASIC3.81□□□□□ -1.8
USP44Q9H0E7 RPS29P2-201ENST00000479278 136 ntBASIC3.81□□□□□ -1.8
USP44Q9H0E7 AC011825.1-201ENST00000484967 388 ntBASIC3.81□□□□□ -1.8
USP44Q9H0E7 NIPA2P2-201ENST00000496376 1083 ntBASIC3.81□□□□□ -1.8
USP44Q9H0E7 RPL23AP55-201ENST00000498163 452 ntBASIC3.81□□□□□ -1.8
USP44Q9H0E7 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.81□□□□□ -1.8
USP44Q9H0E7 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.81□□□□□ -1.8
USP44Q9H0E7 AC026801.2-201ENST00000515352 425 ntBASIC3.81□□□□□ -1.8
USP44Q9H0E7 RN7SKP244-201ENST00000516513 307 ntBASIC3.81□□□□□ -1.8
USP44Q9H0E7 DEFB108D-201ENST00000527787 222 ntBASIC3.81□□□□□ -1.8
USP44Q9H0E7 SNRPGP16-201ENST00000533275 226 ntBASIC3.81□□□□□ -1.8
USP44Q9H0E7 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.81□□□□□ -1.8
USP44Q9H0E7 ROCK1P1-201ENST00000573767 549 ntBASIC3.81□□□□□ -1.8
USP44Q9H0E7 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.81□□□□□ -1.8
USP44Q9H0E7 AP001429.1-201ENST00000602568 530 ntBASIC3.81□□□□□ -1.8
USP44Q9H0E7 AL590229.1-201ENST00000603497 542 ntBASIC3.81□□□□□ -1.8
USP44Q9H0E7 AC091965.4-201ENST00000607691 587 ntBASIC3.81□□□□□ -1.8
USP44Q9H0E7 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.81□□□□□ -1.8
USP44Q9H0E7 AC103710.3-201ENST00000608157 948 ntBASIC3.81□□□□□ -1.8
USP44Q9H0E7 AC012531.5-201ENST00000611375 151 ntBASIC3.81□□□□□ -1.8
USP44Q9H0E7 AC093591.3-201ENST00000634516 308 ntBASIC3.81□□□□□ -1.8
USP44Q9H0E7 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
USP44Q9H0E7 AC002546.1-201ENST00000588041 2504 ntBASIC3.81□□□□□ -1.8
USP44Q9H0E7 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.81□□□□□ -1.8
USP44Q9H0E7 ELL2P3-201ENST00000457883 1602 ntBASIC3.81□□□□□ -1.8
USP44Q9H0E7 MTND5P33-201ENST00000571250 1450 ntBASIC3.8□□□□□ -1.8
USP44Q9H0E7 GABPAP-201ENST00000419271 1356 ntBASIC3.8□□□□□ -1.8
USP44Q9H0E7 RNA5SP383-201ENST00000362934 120 ntBASIC3.8□□□□□ -1.8
USP44Q9H0E7 SNORD6-201ENST00000365444 73 ntBASIC3.8□□□□□ -1.8
USP44Q9H0E7 RNU6-114P-201ENST00000384704 105 ntBASIC3.8□□□□□ -1.8
USP44Q9H0E7 MIR483-201ENST00000385070 76 ntBASIC3.8□□□□□ -1.8
USP44Q9H0E7 RNA5SP129-201ENST00000410276 118 ntBASIC3.8□□□□□ -1.8
USP44Q9H0E7 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.8□□□□□ -1.8
USP44Q9H0E7 RPL17P12-201ENST00000413391 526 ntBASIC3.8□□□□□ -1.8
USP44Q9H0E7 AC233728.2-201ENST00000425348 757 ntBASIC3.8□□□□□ -1.8
USP44Q9H0E7 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.8□□□□□ -1.8
USP44Q9H0E7 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.8□□□□□ -1.8
USP44Q9H0E7 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.8□□□□□ -1.8
USP44Q9H0E7 AC009961.3-201ENST00000449832 765 ntBASIC3.8□□□□□ -1.8
USP44Q9H0E7 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.8□□□□□ -1.8
USP44Q9H0E7 ZNF114P1-201ENST00000453500 292 ntBASIC3.8□□□□□ -1.8
USP44Q9H0E7 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.8□□□□□ -1.8
USP44Q9H0E7 AC112204.1-201ENST00000502591 103 ntBASIC3.8□□□□□ -1.8
USP44Q9H0E7 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.8□□□□□ -1.8
USP44Q9H0E7 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.8□□□□□ -1.8
USP44Q9H0E7 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.8□□□□□ -1.8
USP44Q9H0E7 AC009812.2-201ENST00000517657 457 ntBASIC3.8□□□□□ -1.8
USP44Q9H0E7 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.8□□□□□ -1.8
USP44Q9H0E7 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.8□□□□□ -1.8
USP44Q9H0E7 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.8□□□□□ -1.8
USP44Q9H0E7 AL391156.1-201ENST00000554965 554 ntBASIC3.8□□□□□ -1.8
USP44Q9H0E7 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.8□□□□□ -1.8
USP44Q9H0E7 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.8□□□□□ -1.8
USP44Q9H0E7 MIR3921-201ENST00000577308 85 ntBASIC3.8□□□□□ -1.8
USP44Q9H0E7 OR4K8P-201ENST00000578842 1048 ntBASIC3.8□□□□□ -1.8
USP44Q9H0E7 AP001029.3-201ENST00000588063 596 ntBASIC3.8□□□□□ -1.8
USP44Q9H0E7 AL359999.1-201ENST00000604513 294 ntBASIC3.8□□□□□ -1.8
USP44Q9H0E7 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.8□□□□□ -1.8
USP44Q9H0E7 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
USP44Q9H0E7 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
USP44Q9H0E7 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
USP44Q9H0E7 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.8□□□□□ -1.8
USP44Q9H0E7 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.8□□□□□ -1.8
USP44Q9H0E7 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.8□□□□□ -1.8
USP44Q9H0E7 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
USP44Q9H0E7 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
USP44Q9H0E7 AC009812.4-201ENST00000569134 1805 ntBASIC3.79□□□□□ -1.8
USP44Q9H0E7 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
USP44Q9H0E7 MTND4P4-201ENST00000439033 1366 ntBASIC3.79□□□□□ -1.8
USP44Q9H0E7 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
USP44Q9H0E7 SDAD1P2-201ENST00000441308 2028 ntBASIC3.79□□□□□ -1.8
USP44Q9H0E7 Y_RNA.97-201ENST00000363094 102 ntBASIC3.79□□□□□ -1.8
USP44Q9H0E7 SNORA71.1-201ENST00000364523 117 ntBASIC3.79□□□□□ -1.8
USP44Q9H0E7 SNORD115.1-201ENST00000391109 76 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms