Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 AC005858.4-201ENST00000623191 700 ntBASIC4.32□□□□□ -1.72
SALL3Q9BXA9 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.32□□□□□ -1.72
SALL3Q9BXA9 AC009093.8-201ENST00000641769 292 ntBASIC4.32□□□□□ -1.72
SALL3Q9BXA9 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
SALL3Q9BXA9 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
SALL3Q9BXA9 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SALL3Q9BXA9 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SALL3Q9BXA9 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SALL3Q9BXA9 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
SALL3Q9BXA9 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.32□□□□□ -1.72
SALL3Q9BXA9 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SALL3Q9BXA9 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SALL3Q9BXA9 AC007685.1-201ENST00000329806 452 ntBASIC4.31□□□□□ -1.72
SALL3Q9BXA9 FRG1CP-201ENST00000358464 769 ntBASIC4.31□□□□□ -1.72
SALL3Q9BXA9 RNA5SP391-201ENST00000363456 119 ntBASIC4.31□□□□□ -1.72
SALL3Q9BXA9 RNA5SP235-201ENST00000365411 114 ntBASIC4.31□□□□□ -1.72
SALL3Q9BXA9 Y_RNA.356-201ENST00000365475 113 ntBASIC4.31□□□□□ -1.72
SALL3Q9BXA9 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SALL3Q9BXA9 RNU1-39P-201ENST00000383897 165 ntBASIC4.31□□□□□ -1.72
SALL3Q9BXA9 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.31□□□□□ -1.72
SALL3Q9BXA9 AL136116.1-201ENST00000403591 381 ntBASIC4.31□□□□□ -1.72
SALL3Q9BXA9 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.31□□□□□ -1.72
SALL3Q9BXA9 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.31□□□□□ -1.72
SALL3Q9BXA9 AC007390.1-201ENST00000415722 356 ntBASIC4.31□□□□□ -1.72
SALL3Q9BXA9 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.31□□□□□ -1.72
SALL3Q9BXA9 OR51AB1P-201ENST00000429046 620 ntBASIC4.31□□□□□ -1.72
SALL3Q9BXA9 RPL31P35-201ENST00000431058 377 ntBASIC4.31□□□□□ -1.72
SALL3Q9BXA9 AC007389.2-201ENST00000434630 306 ntBASIC4.31□□□□□ -1.72
SALL3Q9BXA9 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SALL3Q9BXA9 RPL23AP15-201ENST00000450202 459 ntBASIC4.31□□□□□ -1.72
SALL3Q9BXA9 NDUFS5P3-201ENST00000450668 321 ntBASIC4.31□□□□□ -1.72
SALL3Q9BXA9 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.31□□□□□ -1.72
SALL3Q9BXA9 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.31□□□□□ -1.72
SALL3Q9BXA9 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.31□□□□□ -1.72
SALL3Q9BXA9 AC104563.1-201ENST00000476147 376 ntBASIC4.31□□□□□ -1.72
SALL3Q9BXA9 AC021205.2-201ENST00000480069 347 ntBASIC4.31□□□□□ -1.72
SALL3Q9BXA9 AC090453.1-201ENST00000495560 436 ntBASIC4.31□□□□□ -1.72
SALL3Q9BXA9 HMGB1P21-201ENST00000502313 581 ntBASIC4.31□□□□□ -1.72
SALL3Q9BXA9 TMEM251P1-201ENST00000503717 318 ntBASIC4.31□□□□□ -1.72
SALL3Q9BXA9 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SALL3Q9BXA9 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC4.31□□□□□ -1.72
SALL3Q9BXA9 AC104619.4-201ENST00000510773 249 ntBASIC4.31□□□□□ -1.72
SALL3Q9BXA9 AC010486.1-201ENST00000511793 424 ntBASIC4.31□□□□□ -1.72
SALL3Q9BXA9 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.31□□□□□ -1.72
SALL3Q9BXA9 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.31□□□□□ -1.72
SALL3Q9BXA9 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.31□□□□□ -1.72
SALL3Q9BXA9 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.31□□□□□ -1.72
SALL3Q9BXA9 TRMT10BP1-201ENST00000519377 943 ntBASIC4.31□□□□□ -1.72
SALL3Q9BXA9 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.31□□□□□ -1.72
SALL3Q9BXA9 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.31□□□□□ -1.72
SALL3Q9BXA9 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.31□□□□□ -1.72
SALL3Q9BXA9 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.31□□□□□ -1.72
SALL3Q9BXA9 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.31□□□□□ -1.72
SALL3Q9BXA9 MTCO3P13-201ENST00000577757 781 ntBASIC4.31□□□□□ -1.72
SALL3Q9BXA9 AC013553.2-201ENST00000604244 589 ntBASIC4.31□□□□□ -1.72
SALL3Q9BXA9 AC007621.1-201ENST00000604544 437 ntBASIC4.31□□□□□ -1.72
SALL3Q9BXA9 U4.6-201ENST00000621618 127 ntBASIC4.31□□□□□ -1.72
SALL3Q9BXA9 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SALL3Q9BXA9 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SALL3Q9BXA9 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SALL3Q9BXA9 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SALL3Q9BXA9 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
SALL3Q9BXA9 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SALL3Q9BXA9 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.31□□□□□ -1.72
SALL3Q9BXA9 AC106871.1-201ENST00000568324 3102 ntBASIC4.31□□□□□ -1.72
SALL3Q9BXA9 AP002907.1-201ENST00000606361 1430 ntBASIC4.3□□□□□ -1.72
SALL3Q9BXA9 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SALL3Q9BXA9 CEP170P1-201ENST00000502249 4587 ntBASIC4.3□□□□□ -1.72
SALL3Q9BXA9 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SALL3Q9BXA9 Y_RNA.46-201ENST00000362695 102 ntBASIC4.3□□□□□ -1.72
SALL3Q9BXA9 RNU6-730P-201ENST00000383954 104 ntBASIC4.3□□□□□ -1.72
SALL3Q9BXA9 RNU6-767P-201ENST00000384132 107 ntBASIC4.3□□□□□ -1.72
SALL3Q9BXA9 Y_RNA.460-201ENST00000384255 102 ntBASIC4.3□□□□□ -1.72
SALL3Q9BXA9 RNU6-692P-201ENST00000384496 107 ntBASIC4.3□□□□□ -1.72
SALL3Q9BXA9 Y_RNA.529-201ENST00000384586 119 ntBASIC4.3□□□□□ -1.72
SALL3Q9BXA9 RPL23AP32-201ENST00000395315 459 ntBASIC4.3□□□□□ -1.72
SALL3Q9BXA9 AL590704.1-201ENST00000402856 794 ntBASIC4.3□□□□□ -1.72
SALL3Q9BXA9 MRPL42P2-201ENST00000403169 426 ntBASIC4.3□□□□□ -1.72
SALL3Q9BXA9 RNU6ATAC-201ENST00000408749 126 ntBASIC4.3□□□□□ -1.72
SALL3Q9BXA9 RHEBP3-201ENST00000411920 351 ntBASIC4.3□□□□□ -1.72
SALL3Q9BXA9 AC004987.3-201ENST00000413879 771 ntBASIC4.3□□□□□ -1.72
SALL3Q9BXA9 RPS12P23-201ENST00000419579 400 ntBASIC4.3□□□□□ -1.72
SALL3Q9BXA9 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.3□□□□□ -1.72
SALL3Q9BXA9 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.3□□□□□ -1.72
SALL3Q9BXA9 AL353193.1-201ENST00000421444 268 ntBASIC4.3□□□□□ -1.72
SALL3Q9BXA9 AL353777.1-201ENST00000425552 326 ntBASIC4.3□□□□□ -1.72
SALL3Q9BXA9 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.3□□□□□ -1.72
SALL3Q9BXA9 AC018644.1-201ENST00000429934 551 ntBASIC4.3□□□□□ -1.72
SALL3Q9BXA9 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.3□□□□□ -1.72
SALL3Q9BXA9 RPL23AP74-201ENST00000437246 471 ntBASIC4.3□□□□□ -1.72
SALL3Q9BXA9 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.3□□□□□ -1.72
SALL3Q9BXA9 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.3□□□□□ -1.72
SALL3Q9BXA9 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.3□□□□□ -1.72
SALL3Q9BXA9 AC133473.1-201ENST00000455173 299 ntBASIC4.3□□□□□ -1.72
SALL3Q9BXA9 S100A11P1-201ENST00000477525 312 ntBASIC4.3□□□□□ -1.72
SALL3Q9BXA9 AC106707.2-201ENST00000484182 374 ntBASIC4.3□□□□□ -1.72
SALL3Q9BXA9 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.3□□□□□ -1.72
SALL3Q9BXA9 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.3□□□□□ -1.72
SALL3Q9BXA9 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.3□□□□□ -1.72
SALL3Q9BXA9 AC117522.3-201ENST00000507974 584 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms