Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 MIR6130-201ENST00000619419 109 ntBASIC4.15□□□□□ -1.75
NDC1Q9BTX1 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.15□□□□□ -1.75
NDC1Q9BTX1 AC007546.2-201ENST00000623996 360 ntBASIC4.15□□□□□ -1.75
NDC1Q9BTX1 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.15□□□□□ -1.75
NDC1Q9BTX1 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
NDC1Q9BTX1 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
NDC1Q9BTX1 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
NDC1Q9BTX1 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.15□□□□□ -1.75
NDC1Q9BTX1 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
NDC1Q9BTX1 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
NDC1Q9BTX1 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.15□□□□□ -1.75
NDC1Q9BTX1 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
NDC1Q9BTX1 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
NDC1Q9BTX1 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
NDC1Q9BTX1 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.14□□□□□ -1.75
NDC1Q9BTX1 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NDC1Q9BTX1 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.14□□□□□ -1.75
NDC1Q9BTX1 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC4.14□□□□□ -1.75
NDC1Q9BTX1 AC022893.2-201ENST00000564832 3296 ntBASIC4.14□□□□□ -1.75
NDC1Q9BTX1 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
NDC1Q9BTX1 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NDC1Q9BTX1 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
NDC1Q9BTX1 RNA5SP307-201ENST00000362863 116 ntBASIC4.14□□□□□ -1.75
NDC1Q9BTX1 Y_RNA.259-201ENST00000364619 101 ntBASIC4.14□□□□□ -1.75
NDC1Q9BTX1 RNU6-712P-201ENST00000410558 100 ntBASIC4.14□□□□□ -1.75
NDC1Q9BTX1 BX323014.1-201ENST00000412876 237 ntBASIC4.14□□□□□ -1.75
NDC1Q9BTX1 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.14□□□□□ -1.75
NDC1Q9BTX1 RPL21P24-201ENST00000413752 448 ntBASIC4.14□□□□□ -1.75
NDC1Q9BTX1 RPL7L1P10-201ENST00000427790 463 ntBASIC4.14□□□□□ -1.75
NDC1Q9BTX1 RPL36AP6-201ENST00000435770 321 ntBASIC4.14□□□□□ -1.75
NDC1Q9BTX1 RPL23AP52-201ENST00000439311 478 ntBASIC4.14□□□□□ -1.75
NDC1Q9BTX1 BRK1P2-201ENST00000442875 223 ntBASIC4.14□□□□□ -1.75
NDC1Q9BTX1 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.14□□□□□ -1.75
NDC1Q9BTX1 AL162395.1-201ENST00000457882 422 ntBASIC4.14□□□□□ -1.75
NDC1Q9BTX1 RNU7-180P-201ENST00000459240 63 ntBASIC4.14□□□□□ -1.75
NDC1Q9BTX1 RPL23AP11-201ENST00000475260 469 ntBASIC4.14□□□□□ -1.75
NDC1Q9BTX1 RPS27AP1-201ENST00000475545 471 ntBASIC4.14□□□□□ -1.75
NDC1Q9BTX1 AC105137.1-201ENST00000484355 562 ntBASIC4.14□□□□□ -1.75
NDC1Q9BTX1 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.14□□□□□ -1.75
NDC1Q9BTX1 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.14□□□□□ -1.75
NDC1Q9BTX1 MYL12AP1-201ENST00000518490 515 ntBASIC4.14□□□□□ -1.75
NDC1Q9BTX1 AC100870.1-201ENST00000522035 505 ntBASIC4.14□□□□□ -1.75
NDC1Q9BTX1 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC4.14□□□□□ -1.75
NDC1Q9BTX1 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.14□□□□□ -1.75
NDC1Q9BTX1 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NDC1Q9BTX1 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NDC1Q9BTX1 TVP23BP1-201ENST00000557500 617 ntBASIC4.14□□□□□ -1.75
NDC1Q9BTX1 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.14□□□□□ -1.75
NDC1Q9BTX1 BNIP3P5-201ENST00000562290 498 ntBASIC4.14□□□□□ -1.75
NDC1Q9BTX1 MIR3160-1-201ENST00000577972 85 ntBASIC4.14□□□□□ -1.75
NDC1Q9BTX1 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.14□□□□□ -1.75
NDC1Q9BTX1 Z98200.1-201ENST00000607298 470 ntBASIC4.14□□□□□ -1.75
NDC1Q9BTX1 AL021997.2-201ENST00000615674 271 ntBASIC4.14□□□□□ -1.75
NDC1Q9BTX1 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NDC1Q9BTX1 MIR3653-201ENST00000625572 110 ntBASIC4.14□□□□□ -1.75
NDC1Q9BTX1 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.14□□□□□ -1.75
NDC1Q9BTX1 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
NDC1Q9BTX1 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NDC1Q9BTX1 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NDC1Q9BTX1 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
NDC1Q9BTX1 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.14□□□□□ -1.75
NDC1Q9BTX1 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
NDC1Q9BTX1 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.14□□□□□ -1.75
NDC1Q9BTX1 AC090229.1-201ENST00000590983 1609 ntBASIC4.13□□□□□ -1.75
NDC1Q9BTX1 AL158163.1-201ENST00000603915 1649 ntBASIC4.13□□□□□ -1.75
NDC1Q9BTX1 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NDC1Q9BTX1 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NDC1Q9BTX1 MIR383-201ENST00000362257 73 ntBASIC4.13□□□□□ -1.75
NDC1Q9BTX1 RNU6-179P-201ENST00000363350 107 ntBASIC4.13□□□□□ -1.75
NDC1Q9BTX1 RNU6-1284P-201ENST00000363701 100 ntBASIC4.13□□□□□ -1.75
NDC1Q9BTX1 RNA5SP28-201ENST00000363841 119 ntBASIC4.13□□□□□ -1.75
NDC1Q9BTX1 Y_RNA.301-201ENST00000364990 103 ntBASIC4.13□□□□□ -1.75
NDC1Q9BTX1 Y_RNA.315-201ENST00000365117 102 ntBASIC4.13□□□□□ -1.75
NDC1Q9BTX1 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NDC1Q9BTX1 RNU1-44P-201ENST00000384453 163 ntBASIC4.13□□□□□ -1.75
NDC1Q9BTX1 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
NDC1Q9BTX1 OR6C66P-201ENST00000414917 930 ntBASIC4.13□□□□□ -1.75
NDC1Q9BTX1 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.13□□□□□ -1.75
NDC1Q9BTX1 AC068533.1-201ENST00000418542 415 ntBASIC4.13□□□□□ -1.75
NDC1Q9BTX1 AL139095.3-201ENST00000419672 1203 ntBASIC4.13□□□□□ -1.75
NDC1Q9BTX1 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.13□□□□□ -1.75
NDC1Q9BTX1 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.13□□□□□ -1.75
NDC1Q9BTX1 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.13□□□□□ -1.75
NDC1Q9BTX1 KCTD9P3-201ENST00000434597 1169 ntBASIC4.13□□□□□ -1.75
NDC1Q9BTX1 AL121871.1-201ENST00000443413 436 ntBASIC4.13□□□□□ -1.75
NDC1Q9BTX1 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.13□□□□□ -1.75
NDC1Q9BTX1 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
NDC1Q9BTX1 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.13□□□□□ -1.75
NDC1Q9BTX1 AC091167.1-201ENST00000492017 396 ntBASIC4.13□□□□□ -1.75
NDC1Q9BTX1 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.13□□□□□ -1.75
NDC1Q9BTX1 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.13□□□□□ -1.75
NDC1Q9BTX1 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.13□□□□□ -1.75
NDC1Q9BTX1 RNU6-1045P-201ENST00000516321 107 ntBASIC4.13□□□□□ -1.75
NDC1Q9BTX1 RNU6-1038P-201ENST00000516516 104 ntBASIC4.13□□□□□ -1.75
NDC1Q9BTX1 RNU6-1092P-201ENST00000516955 87 ntBASIC4.13□□□□□ -1.75
NDC1Q9BTX1 MRPL49P2-201ENST00000521066 465 ntBASIC4.13□□□□□ -1.75
NDC1Q9BTX1 AL118558.2-201ENST00000556294 238 ntBASIC4.13□□□□□ -1.75
NDC1Q9BTX1 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
NDC1Q9BTX1 AC007224.1-201ENST00000564410 144 ntBASIC4.13□□□□□ -1.75
NDC1Q9BTX1 FRG2DP-202ENST00000566967 323 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms