Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 AC024082.2-201ENST00000434771 238 ntBASIC1.37□□□□□ -2.19
VPS25Q9BRG1 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC1.37□□□□□ -2.19
VPS25Q9BRG1 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC1.37□□□□□ -2.19
VPS25Q9BRG1 DDX3P2-201ENST00000446138 111 ntBASIC1.37□□□□□ -2.19
VPS25Q9BRG1 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.37□□□□□ -2.19
VPS25Q9BRG1 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
VPS25Q9BRG1 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
VPS25Q9BRG1 RNU6-491P-201ENST00000516099 110 ntBASIC1.37□□□□□ -2.19
VPS25Q9BRG1 RNA5SP341-201ENST00000516261 117 ntBASIC1.37□□□□□ -2.19
VPS25Q9BRG1 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC1.37□□□□□ -2.19
VPS25Q9BRG1 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.37□□□□□ -2.19
VPS25Q9BRG1 GNAI2P1-201ENST00000541815 315 ntBASIC1.37□□□□□ -2.19
VPS25Q9BRG1 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC1.37□□□□□ -2.19
VPS25Q9BRG1 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC1.37□□□□□ -2.19
VPS25Q9BRG1 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC1.37□□□□□ -2.19
VPS25Q9BRG1 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.37□□□□□ -2.19
VPS25Q9BRG1 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.37□□□□□ -2.19
VPS25Q9BRG1 SEPT7P9-203ENST00000604116 343 ntBASIC1.37□□□□□ -2.19
VPS25Q9BRG1 AC124312.4-201ENST00000605533 310 ntBASIC1.37□□□□□ -2.19
VPS25Q9BRG1 AC104763.3-201ENST00000613765 618 ntBASIC1.37□□□□□ -2.19
VPS25Q9BRG1 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.37□□□□□ -2.19
VPS25Q9BRG1 AC039056.2-201ENST00000622261 511 ntBASIC1.37□□□□□ -2.19
VPS25Q9BRG1 MIR6766-201ENST00000622641 72 ntBASIC1.37□□□□□ -2.19
VPS25Q9BRG1 AC090772.4-201ENST00000623599 362 ntBASIC1.37□□□□□ -2.19
VPS25Q9BRG1 LINC02211-204ENST00000642024 1070 ntBASIC1.37□□□□□ -2.19
VPS25Q9BRG1 MTCO1P4-201ENST00000520516 1409 ntBASIC1.37□□□□□ -2.19
VPS25Q9BRG1 NUP58P1-201ENST00000502546 1738 ntBASIC1.37□□□□□ -2.19
VPS25Q9BRG1 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.37□□□□□ -2.19
VPS25Q9BRG1 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.36□□□□□ -2.19
VPS25Q9BRG1 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
VPS25Q9BRG1 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC1.36□□□□□ -2.19
VPS25Q9BRG1 MIR126-201ENST00000362291 85 ntBASIC1.36□□□□□ -2.19
VPS25Q9BRG1 RNA5SP374-201ENST00000362939 125 ntBASIC1.36□□□□□ -2.19
VPS25Q9BRG1 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
VPS25Q9BRG1 SNORA8-201ENST00000384574 139 ntBASIC1.36□□□□□ -2.19
VPS25Q9BRG1 SNORA67.4-201ENST00000384688 142 ntBASIC1.36□□□□□ -2.19
VPS25Q9BRG1 MIR218-1-201ENST00000384999 110 ntBASIC1.36□□□□□ -2.19
VPS25Q9BRG1 MIR27B-201ENST00000385129 97 ntBASIC1.36□□□□□ -2.19
VPS25Q9BRG1 RNU6-750P-201ENST00000390946 107 ntBASIC1.36□□□□□ -2.19
VPS25Q9BRG1 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
VPS25Q9BRG1 PTMAP2-201ENST00000397627 327 ntBASIC1.36□□□□□ -2.19
VPS25Q9BRG1 RN7SKP51-201ENST00000410781 304 ntBASIC1.36□□□□□ -2.19
VPS25Q9BRG1 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.36□□□□□ -2.19
VPS25Q9BRG1 NDUFB4P7-201ENST00000423198 363 ntBASIC1.36□□□□□ -2.19
VPS25Q9BRG1 Z85994.2-201ENST00000434327 452 ntBASIC1.36□□□□□ -2.19
VPS25Q9BRG1 AL591719.1-201ENST00000444669 744 ntBASIC1.36□□□□□ -2.19
VPS25Q9BRG1 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC1.36□□□□□ -2.19
VPS25Q9BRG1 HMGN3P1-201ENST00000453847 193 ntBASIC1.36□□□□□ -2.19
VPS25Q9BRG1 RN7SL542P-201ENST00000467147 294 ntBASIC1.36□□□□□ -2.19
VPS25Q9BRG1 AC079203.1-201ENST00000487972 404 ntBASIC1.36□□□□□ -2.19
VPS25Q9BRG1 AC080014.1-201ENST00000496877 1201 ntBASIC1.36□□□□□ -2.19
VPS25Q9BRG1 HIGD1AP13-201ENST00000509878 289 ntBASIC1.36□□□□□ -2.19
VPS25Q9BRG1 AF213884.2-201ENST00000510417 903 ntBASIC1.36□□□□□ -2.19
VPS25Q9BRG1 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC1.36□□□□□ -2.19
VPS25Q9BRG1 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.36□□□□□ -2.19
VPS25Q9BRG1 RNU6-27P-201ENST00000516146 107 ntBASIC1.36□□□□□ -2.19
VPS25Q9BRG1 RNA5SP24-201ENST00000516478 95 ntBASIC1.36□□□□□ -2.19
VPS25Q9BRG1 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC1.36□□□□□ -2.19
VPS25Q9BRG1 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.36□□□□□ -2.19
VPS25Q9BRG1 MTCYBP20-201ENST00000524239 1129 ntBASIC1.36□□□□□ -2.19
VPS25Q9BRG1 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.36□□□□□ -2.19
VPS25Q9BRG1 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.36□□□□□ -2.19
VPS25Q9BRG1 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC1.36□□□□□ -2.19
VPS25Q9BRG1 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.36□□□□□ -2.19
VPS25Q9BRG1 MIR3126-201ENST00000577443 74 ntBASIC1.36□□□□□ -2.19
VPS25Q9BRG1 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.36□□□□□ -2.19
VPS25Q9BRG1 AC022069.1-201ENST00000582910 658 ntBASIC1.36□□□□□ -2.19
VPS25Q9BRG1 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC1.36□□□□□ -2.19
VPS25Q9BRG1 MTCO3P22-201ENST00000603219 784 ntBASIC1.36□□□□□ -2.19
VPS25Q9BRG1 SUMO2P14-201ENST00000604488 293 ntBASIC1.36□□□□□ -2.19
VPS25Q9BRG1 AC069294.1-201ENST00000608397 350 ntBASIC1.36□□□□□ -2.19
VPS25Q9BRG1 AC008498.1-201ENST00000613012 531 ntBASIC1.36□□□□□ -2.19
VPS25Q9BRG1 U6.105-201ENST00000637379 88 ntBASIC1.36□□□□□ -2.19
VPS25Q9BRG1 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.36□□□□□ -2.19
VPS25Q9BRG1 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
VPS25Q9BRG1 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.35□□□□□ -2.19
VPS25Q9BRG1 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
VPS25Q9BRG1 RNU1-72P-201ENST00000362976 153 ntBASIC1.35□□□□□ -2.19
VPS25Q9BRG1 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC1.35□□□□□ -2.19
VPS25Q9BRG1 SNORA56-201ENST00000383966 129 ntBASIC1.35□□□□□ -2.19
VPS25Q9BRG1 MIR9-1-201ENST00000385198 89 ntBASIC1.35□□□□□ -2.19
VPS25Q9BRG1 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC1.35□□□□□ -2.19
VPS25Q9BRG1 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC1.35□□□□□ -2.19
VPS25Q9BRG1 OR4K6P-201ENST00000416478 897 ntBASIC1.35□□□□□ -2.19
VPS25Q9BRG1 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.35□□□□□ -2.19
VPS25Q9BRG1 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.35□□□□□ -2.19
VPS25Q9BRG1 AL590383.1-201ENST00000428602 75 ntBASIC1.35□□□□□ -2.19
VPS25Q9BRG1 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC1.35□□□□□ -2.19
VPS25Q9BRG1 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC1.35□□□□□ -2.19
VPS25Q9BRG1 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
VPS25Q9BRG1 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
VPS25Q9BRG1 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.35□□□□□ -2.19
VPS25Q9BRG1 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.35□□□□□ -2.19
VPS25Q9BRG1 MRPS17P3-201ENST00000465453 385 ntBASIC1.35□□□□□ -2.19
VPS25Q9BRG1 RN7SL807P-201ENST00000470923 297 ntBASIC1.35□□□□□ -2.19
VPS25Q9BRG1 RPL23AP63-201ENST00000498752 471 ntBASIC1.35□□□□□ -2.19
VPS25Q9BRG1 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC1.35□□□□□ -2.19
VPS25Q9BRG1 AC021146.2-201ENST00000504736 556 ntBASIC1.35□□□□□ -2.19
VPS25Q9BRG1 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
VPS25Q9BRG1 AC098591.2-201ENST00000510152 315 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms