Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.49□□□□□ -2.01
CDX2Q99626 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CDX2Q99626 AC016717.2-201ENST00000609089 5141 ntBASIC2.49□□□□□ -2.01
CDX2Q99626 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CDX2Q99626 MIR378A-201ENST00000362177 66 ntBASIC2.49□□□□□ -2.01
CDX2Q99626 RNA5SP456-201ENST00000364002 114 ntBASIC2.49□□□□□ -2.01
CDX2Q99626 SNORA14A-201ENST00000364773 135 ntBASIC2.49□□□□□ -2.01
CDX2Q99626 RNU6-657P-201ENST00000383904 107 ntBASIC2.49□□□□□ -2.01
CDX2Q99626 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.49□□□□□ -2.01
CDX2Q99626 AL133264.1-201ENST00000407157 562 ntBASIC2.49□□□□□ -2.01
CDX2Q99626 RNU6-712P-201ENST00000410558 100 ntBASIC2.49□□□□□ -2.01
CDX2Q99626 RN7SKP140-201ENST00000411196 284 ntBASIC2.49□□□□□ -2.01
CDX2Q99626 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.49□□□□□ -2.01
CDX2Q99626 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC2.49□□□□□ -2.01
CDX2Q99626 AC099677.1-201ENST00000420575 175 ntBASIC2.49□□□□□ -2.01
CDX2Q99626 SAR1AP4-201ENST00000429225 591 ntBASIC2.49□□□□□ -2.01
CDX2Q99626 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC2.49□□□□□ -2.01
CDX2Q99626 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.49□□□□□ -2.01
CDX2Q99626 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.49□□□□□ -2.01
CDX2Q99626 MTND2P19-201ENST00000449129 1012 ntBASIC2.49□□□□□ -2.01
CDX2Q99626 snoU109.4-201ENST00000458953 143 ntBASIC2.49□□□□□ -2.01
CDX2Q99626 RPS23P3-201ENST00000470993 430 ntBASIC2.49□□□□□ -2.01
CDX2Q99626 RPL36AP51-201ENST00000487216 318 ntBASIC2.49□□□□□ -2.01
CDX2Q99626 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CDX2Q99626 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.49□□□□□ -2.01
CDX2Q99626 BOLA3P3-201ENST00000505182 232 ntBASIC2.49□□□□□ -2.01
CDX2Q99626 AC112673.1-201ENST00000513168 575 ntBASIC2.49□□□□□ -2.01
CDX2Q99626 SNORA31.1-201ENST00000515993 133 ntBASIC2.49□□□□□ -2.01
CDX2Q99626 SNORA31.5-201ENST00000516190 133 ntBASIC2.49□□□□□ -2.01
CDX2Q99626 MTND1P36-201ENST00000522384 936 ntBASIC2.49□□□□□ -2.01
CDX2Q99626 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC2.49□□□□□ -2.01
CDX2Q99626 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.49□□□□□ -2.01
CDX2Q99626 AC087897.1-201ENST00000550134 156 ntBASIC2.49□□□□□ -2.01
CDX2Q99626 EEF1B2P4-201ENST00000551398 348 ntBASIC2.49□□□□□ -2.01
CDX2Q99626 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2.49□□□□□ -2.01
CDX2Q99626 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.49□□□□□ -2.01
CDX2Q99626 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.49□□□□□ -2.01
CDX2Q99626 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.49□□□□□ -2.01
CDX2Q99626 AC122134.1-202ENST00000569111 1201 ntBASIC2.49□□□□□ -2.01
CDX2Q99626 AP001029.3-201ENST00000588063 596 ntBASIC2.49□□□□□ -2.01
CDX2Q99626 AC008507.2-201ENST00000588402 1176 ntBASIC2.49□□□□□ -2.01
CDX2Q99626 AC091057.2-201ENST00000602594 792 ntBASIC2.49□□□□□ -2.01
CDX2Q99626 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.49□□□□□ -2.01
CDX2Q99626 AP003973.1-201ENST00000604639 691 ntBASIC2.49□□□□□ -2.01
CDX2Q99626 MIR6845-201ENST00000613182 61 ntBASIC2.49□□□□□ -2.01
CDX2Q99626 AC253576.2-201ENST00000618815 580 ntBASIC2.49□□□□□ -2.01
CDX2Q99626 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.49□□□□□ -2.01
CDX2Q99626 AC006249.1-201ENST00000621223 471 ntBASIC2.49□□□□□ -2.01
CDX2Q99626 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC2.49□□□□□ -2.01
CDX2Q99626 AC040168.1-201ENST00000623594 991 ntBASIC2.49□□□□□ -2.01
CDX2Q99626 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.48□□□□□ -2.01
CDX2Q99626 HMGB1P5-201ENST00000255320 642 ntBASIC2.48□□□□□ -2.01
CDX2Q99626 SNORD82-201ENST00000365530 70 ntBASIC2.48□□□□□ -2.01
CDX2Q99626 RNU6-1176P-201ENST00000390955 107 ntBASIC2.48□□□□□ -2.01
CDX2Q99626 SNORA17.3-201ENST00000391159 129 ntBASIC2.48□□□□□ -2.01
CDX2Q99626 TMSB4XP8-201ENST00000402089 135 ntBASIC2.48□□□□□ -2.01
CDX2Q99626 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.48□□□□□ -2.01
CDX2Q99626 RNA5SP344-201ENST00000411081 104 ntBASIC2.48□□□□□ -2.01
CDX2Q99626 TMSB4XP6-201ENST00000415187 135 ntBASIC2.48□□□□□ -2.01
CDX2Q99626 SSXP9-201ENST00000417503 292 ntBASIC2.48□□□□□ -2.01
CDX2Q99626 TMSB4XP1-201ENST00000424567 135 ntBASIC2.48□□□□□ -2.01
CDX2Q99626 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.48□□□□□ -2.01
CDX2Q99626 EZH2P1-201ENST00000431167 291 ntBASIC2.48□□□□□ -2.01
CDX2Q99626 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.48□□□□□ -2.01
CDX2Q99626 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.48□□□□□ -2.01
CDX2Q99626 PTGES3P1-201ENST00000439531 483 ntBASIC2.48□□□□□ -2.01
CDX2Q99626 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.48□□□□□ -2.01
CDX2Q99626 RPL38P4-201ENST00000502376 214 ntBASIC2.48□□□□□ -2.01
CDX2Q99626 AC093767.1-201ENST00000504523 156 ntBASIC2.48□□□□□ -2.01
CDX2Q99626 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.48□□□□□ -2.01
CDX2Q99626 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC2.48□□□□□ -2.01
CDX2Q99626 CKS1BP7-201ENST00000522230 235 ntBASIC2.48□□□□□ -2.01
CDX2Q99626 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC2.48□□□□□ -2.01
CDX2Q99626 LARP7P2-201ENST00000575306 125 ntBASIC2.48□□□□□ -2.01
CDX2Q99626 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC2.48□□□□□ -2.01
CDX2Q99626 VN1R80P-201ENST00000597126 338 ntBASIC2.48□□□□□ -2.01
CDX2Q99626 AC012669.1-201ENST00000603209 283 ntBASIC2.48□□□□□ -2.01
CDX2Q99626 AL592148.2-201ENST00000612210 372 ntBASIC2.48□□□□□ -2.01
CDX2Q99626 AC018926.1-201ENST00000616335 435 ntBASIC2.48□□□□□ -2.01
CDX2Q99626 AL360181.4-201ENST00000621752 134 ntBASIC2.48□□□□□ -2.01
CDX2Q99626 AP003122.6-201ENST00000623831 495 ntBASIC2.48□□□□□ -2.01
CDX2Q99626 MTCO1P23-201ENST00000415223 1526 ntBASIC2.47□□□□□ -2.01
CDX2Q99626 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CDX2Q99626 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CDX2Q99626 AC069528.2-201ENST00000624849 1991 ntBASIC2.47□□□□□ -2.01
CDX2Q99626 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.47□□□□□ -2.01
CDX2Q99626 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CDX2Q99626 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.47□□□□□ -2.01
CDX2Q99626 RNY1P10-201ENST00000363268 113 ntBASIC2.47□□□□□ -2.01
CDX2Q99626 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
CDX2Q99626 MTCO1P56-201ENST00000401674 224 ntBASIC2.47□□□□□ -2.01
CDX2Q99626 AL079342.2-201ENST00000403367 482 ntBASIC2.47□□□□□ -2.01
CDX2Q99626 RNU6-1140P-201ENST00000410517 106 ntBASIC2.47□□□□□ -2.01
CDX2Q99626 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.47□□□□□ -2.01
CDX2Q99626 AL451074.5-201ENST00000415894 435 ntBASIC2.47□□□□□ -2.01
CDX2Q99626 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.47□□□□□ -2.01
CDX2Q99626 C1DP1-201ENST00000426049 402 ntBASIC2.47□□□□□ -2.01
CDX2Q99626 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC2.47□□□□□ -2.01
CDX2Q99626 AC004866.2-201ENST00000438285 481 ntBASIC2.47□□□□□ -2.01
CDX2Q99626 RABEPKP1-201ENST00000440529 1026 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms