Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SNX18Q96RF0 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.83□□□□□ -1.8
SNX18Q96RF0 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SNX18Q96RF0 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SNX18Q96RF0 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.82□□□□□ -1.8
SNX18Q96RF0 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SNX18Q96RF0 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.82□□□□□ -1.8
SNX18Q96RF0 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.82□□□□□ -1.8
SNX18Q96RF0 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SNX18Q96RF0 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.82□□□□□ -1.8
SNX18Q96RF0 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
SNX18Q96RF0 Y_RNA.142-201ENST00000363491 102 ntBASIC3.82□□□□□ -1.8
SNX18Q96RF0 RNU6-511P-201ENST00000363496 107 ntBASIC3.82□□□□□ -1.8
SNX18Q96RF0 Y_RNA.157-201ENST00000363638 102 ntBASIC3.82□□□□□ -1.8
SNX18Q96RF0 RNU4-48P-201ENST00000365559 182 ntBASIC3.82□□□□□ -1.8
SNX18Q96RF0 RNU6-767P-201ENST00000384132 107 ntBASIC3.82□□□□□ -1.8
SNX18Q96RF0 RNU6-754P-201ENST00000391166 107 ntBASIC3.82□□□□□ -1.8
SNX18Q96RF0 RN7SKP159-201ENST00000410657 292 ntBASIC3.82□□□□□ -1.8
SNX18Q96RF0 RNU6-373P-201ENST00000411247 98 ntBASIC3.82□□□□□ -1.8
SNX18Q96RF0 RNA5SP107-201ENST00000411358 122 ntBASIC3.82□□□□□ -1.8
SNX18Q96RF0 TMSB10P2-201ENST00000416049 131 ntBASIC3.82□□□□□ -1.8
SNX18Q96RF0 RPL23AP38-201ENST00000423801 469 ntBASIC3.82□□□□□ -1.8
SNX18Q96RF0 RPL36AP53-201ENST00000432891 316 ntBASIC3.82□□□□□ -1.8
SNX18Q96RF0 MTATP6P16-201ENST00000434543 526 ntBASIC3.82□□□□□ -1.8
SNX18Q96RF0 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.82□□□□□ -1.8
SNX18Q96RF0 RPL36AP13-201ENST00000457490 317 ntBASIC3.82□□□□□ -1.8
SNX18Q96RF0 AC010618.1-201ENST00000469924 477 ntBASIC3.82□□□□□ -1.8
SNX18Q96RF0 AL163973.1-201ENST00000484753 577 ntBASIC3.82□□□□□ -1.8
SNX18Q96RF0 RPS15AP36-201ENST00000492022 382 ntBASIC3.82□□□□□ -1.8
SNX18Q96RF0 RPL7P23-201ENST00000493874 747 ntBASIC3.82□□□□□ -1.8
SNX18Q96RF0 SNORA70.14-201ENST00000516205 110 ntBASIC3.82□□□□□ -1.8
SNX18Q96RF0 SNORD27.1-201ENST00000516319 72 ntBASIC3.82□□□□□ -1.8
SNX18Q96RF0 SNORD60.2-201ENST00000516883 86 ntBASIC3.82□□□□□ -1.8
SNX18Q96RF0 RNU6-64P-201ENST00000517119 105 ntBASIC3.82□□□□□ -1.8
SNX18Q96RF0 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.82□□□□□ -1.8
SNX18Q96RF0 SUB1P1-201ENST00000524415 382 ntBASIC3.82□□□□□ -1.8
SNX18Q96RF0 AC103843.2-201ENST00000530523 682 ntBASIC3.82□□□□□ -1.8
SNX18Q96RF0 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.82□□□□□ -1.8
SNX18Q96RF0 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
SNX18Q96RF0 ARL2BPP2-201ENST00000550907 489 ntBASIC3.82□□□□□ -1.8
SNX18Q96RF0 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.82□□□□□ -1.8
SNX18Q96RF0 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.82□□□□□ -1.8
SNX18Q96RF0 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.82□□□□□ -1.8
SNX18Q96RF0 MIR3939-201ENST00000582614 106 ntBASIC3.82□□□□□ -1.8
SNX18Q96RF0 AL020997.2-201ENST00000602607 184 ntBASIC3.82□□□□□ -1.8
SNX18Q96RF0 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.82□□□□□ -1.8
SNX18Q96RF0 AL603758.1-201ENST00000618654 241 ntBASIC3.82□□□□□ -1.8
SNX18Q96RF0 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.82□□□□□ -1.8
SNX18Q96RF0 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.82□□□□□ -1.8
SNX18Q96RF0 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.82□□□□□ -1.8
SNX18Q96RF0 AC112487.2-201ENST00000637950 304 ntBASIC3.82□□□□□ -1.8
SNX18Q96RF0 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SNX18Q96RF0 TNPO1P3-201ENST00000436471 2662 ntBASIC3.82□□□□□ -1.8
SNX18Q96RF0 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
SNX18Q96RF0 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
SNX18Q96RF0 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
SNX18Q96RF0 EXOC5P1-201ENST00000510543 1969 ntBASIC3.82□□□□□ -1.8
SNX18Q96RF0 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
SNX18Q96RF0 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
SNX18Q96RF0 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.81□□□□□ -1.8
SNX18Q96RF0 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
SNX18Q96RF0 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
SNX18Q96RF0 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SNX18Q96RF0 HSPE1P11-201ENST00000339579 310 ntBASIC3.81□□□□□ -1.8
SNX18Q96RF0 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SNX18Q96RF0 RNU6-641P-201ENST00000384006 107 ntBASIC3.81□□□□□ -1.8
SNX18Q96RF0 Y_RNA.529-201ENST00000384586 119 ntBASIC3.81□□□□□ -1.8
SNX18Q96RF0 MIR135A2-201ENST00000384854 100 ntBASIC3.81□□□□□ -1.8
SNX18Q96RF0 MIR124-3-201ENST00000384866 87 ntBASIC3.81□□□□□ -1.8
SNX18Q96RF0 AL109755.1-201ENST00000401791 649 ntBASIC3.81□□□□□ -1.8
SNX18Q96RF0 AL136116.1-201ENST00000403591 381 ntBASIC3.81□□□□□ -1.8
SNX18Q96RF0 AL583834.1-201ENST00000406943 343 ntBASIC3.81□□□□□ -1.8
SNX18Q96RF0 RNU2-36P-201ENST00000410361 191 ntBASIC3.81□□□□□ -1.8
SNX18Q96RF0 RNU4-65P-201ENST00000410473 140 ntBASIC3.81□□□□□ -1.8
SNX18Q96RF0 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.81□□□□□ -1.8
SNX18Q96RF0 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.81□□□□□ -1.8
SNX18Q96RF0 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.81□□□□□ -1.8
SNX18Q96RF0 OR2AS1P-201ENST00000427827 319 ntBASIC3.81□□□□□ -1.8
SNX18Q96RF0 MED13P1-201ENST00000428342 171 ntBASIC3.81□□□□□ -1.8
SNX18Q96RF0 AC011742.1-201ENST00000431448 434 ntBASIC3.81□□□□□ -1.8
SNX18Q96RF0 CBWD4P-201ENST00000445695 655 ntBASIC3.81□□□□□ -1.8
SNX18Q96RF0 AC073415.1-201ENST00000449240 153 ntBASIC3.81□□□□□ -1.8
SNX18Q96RF0 SNRPGP5-201ENST00000456003 220 ntBASIC3.81□□□□□ -1.8
SNX18Q96RF0 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.81□□□□□ -1.8
SNX18Q96RF0 AC026427.2-201ENST00000506228 536 ntBASIC3.81□□□□□ -1.8
SNX18Q96RF0 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SNX18Q96RF0 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.81□□□□□ -1.8
SNX18Q96RF0 RNU7-51P-201ENST00000516560 62 ntBASIC3.81□□□□□ -1.8
SNX18Q96RF0 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.81□□□□□ -1.8
SNX18Q96RF0 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.81□□□□□ -1.8
SNX18Q96RF0 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.81□□□□□ -1.8
SNX18Q96RF0 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.81□□□□□ -1.8
SNX18Q96RF0 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.81□□□□□ -1.8
SNX18Q96RF0 FAM60DP-201ENST00000524174 632 ntBASIC3.81□□□□□ -1.8
SNX18Q96RF0 PSMA2P1-201ENST00000526365 646 ntBASIC3.81□□□□□ -1.8
SNX18Q96RF0 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.81□□□□□ -1.8
SNX18Q96RF0 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.81□□□□□ -1.8
SNX18Q96RF0 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.81□□□□□ -1.8
SNX18Q96RF0 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.81□□□□□ -1.8
SNX18Q96RF0 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms