Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.54□□□□□ -2
LINC01006Q8NI28 AL391813.2-201ENST00000609113 322 ntBASIC2.54□□□□□ -2
LINC01006Q8NI28 uc_338.1-201ENST00000612113 180 ntBASIC2.54□□□□□ -2
LINC01006Q8NI28 AC011939.3-201ENST00000613686 466 ntBASIC2.54□□□□□ -2
LINC01006Q8NI28 AC092140.2-201ENST00000618027 521 ntBASIC2.54□□□□□ -2
LINC01006Q8NI28 AC009509.4-201ENST00000619202 509 ntBASIC2.54□□□□□ -2
LINC01006Q8NI28 SNORD39.4-201ENST00000620099 78 ntBASIC2.54□□□□□ -2
LINC01006Q8NI28 AC012150.2-201ENST00000621300 544 ntBASIC2.54□□□□□ -2
LINC01006Q8NI28 AL356585.4-201ENST00000623078 1229 ntBASIC2.54□□□□□ -2
LINC01006Q8NI28 AC092656.1-203ENST00000624134 423 ntBASIC2.54□□□□□ -2
LINC01006Q8NI28 AL603839.4-201ENST00000624658 1005 ntBASIC2.54□□□□□ -2
LINC01006Q8NI28 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC2.54□□□□□ -2
LINC01006Q8NI28 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
LINC01006Q8NI28 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
LINC01006Q8NI28 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.54□□□□□ -2
LINC01006Q8NI28 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.54□□□□□ -2
LINC01006Q8NI28 AC058791.1-201ENST00000608412 3198 ntBASIC2.53□□□□□ -2
LINC01006Q8NI28 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
LINC01006Q8NI28 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC2.53□□□□□ -2
LINC01006Q8NI28 MTND5P33-201ENST00000571250 1450 ntBASIC2.53□□□□□ -2
LINC01006Q8NI28 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC2.53□□□□□ -2
LINC01006Q8NI28 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC2.53□□□□□ -2
LINC01006Q8NI28 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.53□□□□□ -2
LINC01006Q8NI28 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC2.53□□□□□ -2
LINC01006Q8NI28 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
LINC01006Q8NI28 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.53□□□□□ -2
LINC01006Q8NI28 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC2.53□□□□□ -2
LINC01006Q8NI28 SNORA44-201ENST00000384584 132 ntBASIC2.53□□□□□ -2
LINC01006Q8NI28 MIR135A2-201ENST00000384854 100 ntBASIC2.53□□□□□ -2
LINC01006Q8NI28 DEFB108C-201ENST00000400154 252 ntBASIC2.53□□□□□ -2
LINC01006Q8NI28 RPL7P25-201ENST00000404151 721 ntBASIC2.53□□□□□ -2
LINC01006Q8NI28 MIR1289-1-201ENST00000408836 144 ntBASIC2.53□□□□□ -2
LINC01006Q8NI28 AC078974.1-201ENST00000411597 223 ntBASIC2.53□□□□□ -2
LINC01006Q8NI28 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC2.53□□□□□ -2
LINC01006Q8NI28 USP9YP13-201ENST00000417797 480 ntBASIC2.53□□□□□ -2
LINC01006Q8NI28 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.53□□□□□ -2
LINC01006Q8NI28 OR4K11P-201ENST00000431829 904 ntBASIC2.53□□□□□ -2
LINC01006Q8NI28 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.53□□□□□ -2
LINC01006Q8NI28 VDAC1P3-201ENST00000434069 851 ntBASIC2.53□□□□□ -2
LINC01006Q8NI28 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.53□□□□□ -2
LINC01006Q8NI28 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.53□□□□□ -2
LINC01006Q8NI28 AL592447.1-201ENST00000447592 540 ntBASIC2.53□□□□□ -2
LINC01006Q8NI28 TPT1P7-201ENST00000458300 517 ntBASIC2.53□□□□□ -2
LINC01006Q8NI28 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.53□□□□□ -2
LINC01006Q8NI28 AC010285.1-201ENST00000470580 392 ntBASIC2.53□□□□□ -2
LINC01006Q8NI28 UBE2DNL-203ENST00000474922 222 ntBASIC2.53□□□□□ -2
LINC01006Q8NI28 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.53□□□□□ -2
LINC01006Q8NI28 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.53□□□□□ -2
LINC01006Q8NI28 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.53□□□□□ -2
LINC01006Q8NI28 AC079140.3-201ENST00000511111 550 ntBASIC2.53□□□□□ -2
LINC01006Q8NI28 RPL23AP94-201ENST00000512518 302 ntBASIC2.53□□□□□ -2
LINC01006Q8NI28 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.53□□□□□ -2
LINC01006Q8NI28 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.53□□□□□ -2
LINC01006Q8NI28 Y_RNA.655-201ENST00000515919 96 ntBASIC2.53□□□□□ -2
LINC01006Q8NI28 RNU6-1095P-201ENST00000516148 108 ntBASIC2.53□□□□□ -2
LINC01006Q8NI28 RN7SKP244-201ENST00000516513 307 ntBASIC2.53□□□□□ -2
LINC01006Q8NI28 RNU6-528P-201ENST00000516926 100 ntBASIC2.53□□□□□ -2
LINC01006Q8NI28 RNU6-1073P-201ENST00000517182 106 ntBASIC2.53□□□□□ -2
LINC01006Q8NI28 PSMA2P1-201ENST00000526365 646 ntBASIC2.53□□□□□ -2
LINC01006Q8NI28 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.53□□□□□ -2
LINC01006Q8NI28 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.53□□□□□ -2
LINC01006Q8NI28 CR383656.7-201ENST00000548164 174 ntBASIC2.53□□□□□ -2
LINC01006Q8NI28 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.53□□□□□ -2
LINC01006Q8NI28 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC2.53□□□□□ -2
LINC01006Q8NI28 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.53□□□□□ -2
LINC01006Q8NI28 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.53□□□□□ -2
LINC01006Q8NI28 MIR2682-201ENST00000580305 110 ntBASIC2.53□□□□□ -2
LINC01006Q8NI28 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC2.53□□□□□ -2
LINC01006Q8NI28 AC060771.1-201ENST00000582031 164 ntBASIC2.53□□□□□ -2
LINC01006Q8NI28 AC146944.4-201ENST00000602697 718 ntBASIC2.53□□□□□ -2
LINC01006Q8NI28 AC015871.2-201ENST00000603605 948 ntBASIC2.53□□□□□ -2
LINC01006Q8NI28 SEPT7P9-203ENST00000604116 343 ntBASIC2.53□□□□□ -2
LINC01006Q8NI28 AC087752.4-201ENST00000605911 462 ntBASIC2.53□□□□□ -2
LINC01006Q8NI28 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.53□□□□□ -2
LINC01006Q8NI28 AC108747.1-201ENST00000609508 535 ntBASIC2.53□□□□□ -2
LINC01006Q8NI28 AC006023.2-201ENST00000609916 167 ntBASIC2.53□□□□□ -2
LINC01006Q8NI28 AL353748.2-201ENST00000622148 471 ntBASIC2.53□□□□□ -2
LINC01006Q8NI28 AC048347.1-201ENST00000624621 427 ntBASIC2.53□□□□□ -2
LINC01006Q8NI28 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.53□□□□□ -2
LINC01006Q8NI28 AC244205.2-202ENST00000635781 342 ntBASIC2.53□□□□□ -2
LINC01006Q8NI28 AC099654.13-201ENST00000639774 207 ntBASIC2.53□□□□□ -2
LINC01006Q8NI28 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
LINC01006Q8NI28 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
LINC01006Q8NI28 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2.01
LINC01006Q8NI28 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
LINC01006Q8NI28 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC2.52□□□□□ -2.01
LINC01006Q8NI28 RNU6-1155P-201ENST00000363554 107 ntBASIC2.52□□□□□ -2.01
LINC01006Q8NI28 Y_RNA.194-201ENST00000363985 102 ntBASIC2.52□□□□□ -2.01
LINC01006Q8NI28 RNU6-359P-201ENST00000365466 108 ntBASIC2.52□□□□□ -2.01
LINC01006Q8NI28 OR5H15-201ENST00000383696 930 ntBASIC2.52□□□□□ -2.01
LINC01006Q8NI28 SNORA7.4-201ENST00000384249 137 ntBASIC2.52□□□□□ -2.01
LINC01006Q8NI28 RNU6-348P-201ENST00000384386 107 ntBASIC2.52□□□□□ -2.01
LINC01006Q8NI28 Y_RNA.559-201ENST00000384686 107 ntBASIC2.52□□□□□ -2.01
LINC01006Q8NI28 SNORD116-4-201ENST00000384733 96 ntBASIC2.52□□□□□ -2.01
LINC01006Q8NI28 Y_RNA.608-201ENST00000410647 95 ntBASIC2.52□□□□□ -2.01
LINC01006Q8NI28 RNU2-71P-201ENST00000411395 189 ntBASIC2.52□□□□□ -2.01
LINC01006Q8NI28 HMGN1P14-201ENST00000412459 517 ntBASIC2.52□□□□□ -2.01
LINC01006Q8NI28 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC2.52□□□□□ -2.01
LINC01006Q8NI28 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.52□□□□□ -2.01
LINC01006Q8NI28 AL356968.1-201ENST00000416622 474 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms