Protein–RNA interactions for Protein: Q8N4P3

HDDC3, Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3Q8N4P3 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC3.05□□□□□ -1.92
HDDC3Q8N4P3 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.05□□□□□ -1.92
HDDC3Q8N4P3 ZYG11AP1-201ENST00000430329 837 ntBASIC3.05□□□□□ -1.92
HDDC3Q8N4P3 FTH1P1-201ENST00000437933 532 ntBASIC3.05□□□□□ -1.92
HDDC3Q8N4P3 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HDDC3Q8N4P3 DDX3P2-201ENST00000446138 111 ntBASIC3.05□□□□□ -1.92
HDDC3Q8N4P3 AL031313.1-201ENST00000448435 256 ntBASIC3.05□□□□□ -1.92
HDDC3Q8N4P3 AC092155.2-201ENST00000454675 477 ntBASIC3.05□□□□□ -1.92
HDDC3Q8N4P3 AC233702.1-201ENST00000482905 502 ntBASIC3.05□□□□□ -1.92
HDDC3Q8N4P3 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.05□□□□□ -1.92
HDDC3Q8N4P3 RNA5SP291-201ENST00000517222 105 ntBASIC3.05□□□□□ -1.92
HDDC3Q8N4P3 AC068657.1-201ENST00000520807 306 ntBASIC3.05□□□□□ -1.92
HDDC3Q8N4P3 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.05□□□□□ -1.92
HDDC3Q8N4P3 MTND2P7-201ENST00000521337 640 ntBASIC3.05□□□□□ -1.92
HDDC3Q8N4P3 MTND3P19-201ENST00000603825 345 ntBASIC3.05□□□□□ -1.92
HDDC3Q8N4P3 AL136363.1-201ENST00000605349 337 ntBASIC3.05□□□□□ -1.92
HDDC3Q8N4P3 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.05□□□□□ -1.92
HDDC3Q8N4P3 AC099654.9-201ENST00000637055 678 ntBASIC3.05□□□□□ -1.92
HDDC3Q8N4P3 AL445984.1-201ENST00000637834 659 ntBASIC3.05□□□□□ -1.92
HDDC3Q8N4P3 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HDDC3Q8N4P3 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
HDDC3Q8N4P3 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
HDDC3Q8N4P3 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.04□□□□□ -1.92
HDDC3Q8N4P3 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
HDDC3Q8N4P3 RNU4-68P-201ENST00000364314 141 ntBASIC3.04□□□□□ -1.92
HDDC3Q8N4P3 SNORA23-201ENST00000365128 182 ntBASIC3.04□□□□□ -1.92
HDDC3Q8N4P3 RNU6-744P-201ENST00000365557 107 ntBASIC3.04□□□□□ -1.92
HDDC3Q8N4P3 RNU6-1316P-201ENST00000384242 108 ntBASIC3.04□□□□□ -1.92
HDDC3Q8N4P3 MIR122-201ENST00000385044 85 ntBASIC3.04□□□□□ -1.92
HDDC3Q8N4P3 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HDDC3Q8N4P3 RNA5SP184-201ENST00000411071 108 ntBASIC3.04□□□□□ -1.92
HDDC3Q8N4P3 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.04□□□□□ -1.92
HDDC3Q8N4P3 RPS25P9-201ENST00000435591 252 ntBASIC3.04□□□□□ -1.92
HDDC3Q8N4P3 AC093156.1-201ENST00000440382 670 ntBASIC3.04□□□□□ -1.92
HDDC3Q8N4P3 RPS24P13-201ENST00000442520 397 ntBASIC3.04□□□□□ -1.92
HDDC3Q8N4P3 BMI1P1-201ENST00000445879 941 ntBASIC3.04□□□□□ -1.92
HDDC3Q8N4P3 Z96811.1-201ENST00000445880 108 ntBASIC3.04□□□□□ -1.92
HDDC3Q8N4P3 EXOSC3P1-201ENST00000448649 500 ntBASIC3.04□□□□□ -1.92
HDDC3Q8N4P3 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.04□□□□□ -1.92
HDDC3Q8N4P3 RPS20P20-201ENST00000460498 340 ntBASIC3.04□□□□□ -1.92
HDDC3Q8N4P3 AC083906.5-201ENST00000503722 328 ntBASIC3.04□□□□□ -1.92
HDDC3Q8N4P3 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.04□□□□□ -1.92
HDDC3Q8N4P3 AP003497.1-201ENST00000528472 562 ntBASIC3.04□□□□□ -1.92
HDDC3Q8N4P3 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.04□□□□□ -1.92
HDDC3Q8N4P3 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.04□□□□□ -1.92
HDDC3Q8N4P3 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC3.04□□□□□ -1.92
HDDC3Q8N4P3 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.04□□□□□ -1.92
HDDC3Q8N4P3 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.04□□□□□ -1.92
HDDC3Q8N4P3 AC013476.2-201ENST00000614456 459 ntBASIC3.04□□□□□ -1.92
HDDC3Q8N4P3 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HDDC3Q8N4P3 AC009269.6-201ENST00000621778 588 ntBASIC3.04□□□□□ -1.92
HDDC3Q8N4P3 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.04□□□□□ -1.92
HDDC3Q8N4P3 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.04□□□□□ -1.92
HDDC3Q8N4P3 AC008669.1-201ENST00000565823 2178 ntBASIC3.04□□□□□ -1.92
HDDC3Q8N4P3 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.04□□□□□ -1.92
HDDC3Q8N4P3 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.03□□□□□ -1.92
HDDC3Q8N4P3 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HDDC3Q8N4P3 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HDDC3Q8N4P3 SNORD56.3-201ENST00000363507 71 ntBASIC3.03□□□□□ -1.92
HDDC3Q8N4P3 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.03□□□□□ -1.92
HDDC3Q8N4P3 RPL32P35-201ENST00000415214 394 ntBASIC3.03□□□□□ -1.92
HDDC3Q8N4P3 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.03□□□□□ -1.92
HDDC3Q8N4P3 AC099548.1-201ENST00000421443 426 ntBASIC3.03□□□□□ -1.92
HDDC3Q8N4P3 AC007919.1-201ENST00000429380 217 ntBASIC3.03□□□□□ -1.92
HDDC3Q8N4P3 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.03□□□□□ -1.92
HDDC3Q8N4P3 UBE2V1P13-201ENST00000436983 439 ntBASIC3.03□□□□□ -1.92
HDDC3Q8N4P3 AC105272.1-201ENST00000438604 198 ntBASIC3.03□□□□□ -1.92
HDDC3Q8N4P3 Z82210.1-201ENST00000440037 231 ntBASIC3.03□□□□□ -1.92
HDDC3Q8N4P3 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.03□□□□□ -1.92
HDDC3Q8N4P3 CBWD4P-201ENST00000445695 655 ntBASIC3.03□□□□□ -1.92
HDDC3Q8N4P3 RN7SL432P-201ENST00000484057 298 ntBASIC3.03□□□□□ -1.92
HDDC3Q8N4P3 HMGB1P36-201ENST00000487709 576 ntBASIC3.03□□□□□ -1.92
HDDC3Q8N4P3 AP001025.2-201ENST00000490908 477 ntBASIC3.03□□□□□ -1.92
HDDC3Q8N4P3 RPS27P26-201ENST00000494583 239 ntBASIC3.03□□□□□ -1.92
HDDC3Q8N4P3 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.03□□□□□ -1.92
HDDC3Q8N4P3 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
HDDC3Q8N4P3 RNA5SP217-201ENST00000515959 91 ntBASIC3.03□□□□□ -1.92
HDDC3Q8N4P3 SCARNA20.6-201ENST00000517251 106 ntBASIC3.03□□□□□ -1.92
HDDC3Q8N4P3 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.03□□□□□ -1.92
HDDC3Q8N4P3 MTCO1P47-201ENST00000523889 1271 ntBASIC3.03□□□□□ -1.92
HDDC3Q8N4P3 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.03□□□□□ -1.92
HDDC3Q8N4P3 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.03□□□□□ -1.92
HDDC3Q8N4P3 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.03□□□□□ -1.92
HDDC3Q8N4P3 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.03□□□□□ -1.92
HDDC3Q8N4P3 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.03□□□□□ -1.92
HDDC3Q8N4P3 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.03□□□□□ -1.92
HDDC3Q8N4P3 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.03□□□□□ -1.92
HDDC3Q8N4P3 MIR4509-3-201ENST00000578671 94 ntBASIC3.03□□□□□ -1.92
HDDC3Q8N4P3 MIR4509-2-201ENST00000583920 94 ntBASIC3.03□□□□□ -1.92
HDDC3Q8N4P3 AC010620.2-201ENST00000600135 313 ntBASIC3.03□□□□□ -1.92
HDDC3Q8N4P3 AC091057.2-201ENST00000602594 792 ntBASIC3.03□□□□□ -1.92
HDDC3Q8N4P3 AL035413.2-201ENST00000604801 525 ntBASIC3.03□□□□□ -1.92
HDDC3Q8N4P3 AC090186.1-201ENST00000605991 572 ntBASIC3.03□□□□□ -1.92
HDDC3Q8N4P3 MIR4509-1-201ENST00000618224 94 ntBASIC3.03□□□□□ -1.92
HDDC3Q8N4P3 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.03□□□□□ -1.92
HDDC3Q8N4P3 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.03□□□□□ -1.92
HDDC3Q8N4P3 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.03□□□□□ -1.92
HDDC3Q8N4P3 AC010149.2-201ENST00000637608 315 ntBASIC3.03□□□□□ -1.92
HDDC3Q8N4P3 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.03□□□□□ -1.92
HDDC3Q8N4P3 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms