Protein–RNA interactions for Protein: Q8IXZ2

ZC3H3, Zinc finger CCCH domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H3Q8IXZ2 MTCO1P39-201ENST00000426148 480 ntBASIC3.18□□□□□ -1.9
ZC3H3Q8IXZ2 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.18□□□□□ -1.9
ZC3H3Q8IXZ2 AC004866.2-201ENST00000438285 481 ntBASIC3.18□□□□□ -1.9
ZC3H3Q8IXZ2 AC093156.1-201ENST00000440382 670 ntBASIC3.18□□□□□ -1.9
ZC3H3Q8IXZ2 AL662791.1-201ENST00000441992 928 ntBASIC3.18□□□□□ -1.9
ZC3H3Q8IXZ2 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.18□□□□□ -1.9
ZC3H3Q8IXZ2 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.18□□□□□ -1.9
ZC3H3Q8IXZ2 ARPC3P2-201ENST00000457786 533 ntBASIC3.18□□□□□ -1.9
ZC3H3Q8IXZ2 AP001486.1-201ENST00000463339 476 ntBASIC3.18□□□□□ -1.9
ZC3H3Q8IXZ2 RPL30P6-201ENST00000475925 342 ntBASIC3.18□□□□□ -1.9
ZC3H3Q8IXZ2 AC072039.1-201ENST00000477611 581 ntBASIC3.18□□□□□ -1.9
ZC3H3Q8IXZ2 AC021382.1-201ENST00000483523 359 ntBASIC3.18□□□□□ -1.9
ZC3H3Q8IXZ2 AC092185.1-201ENST00000491371 97 ntBASIC3.18□□□□□ -1.9
ZC3H3Q8IXZ2 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.18□□□□□ -1.9
ZC3H3Q8IXZ2 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.18□□□□□ -1.9
ZC3H3Q8IXZ2 AC034159.1-201ENST00000513885 583 ntBASIC3.18□□□□□ -1.9
ZC3H3Q8IXZ2 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.18□□□□□ -1.9
ZC3H3Q8IXZ2 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.18□□□□□ -1.9
ZC3H3Q8IXZ2 RNA5SP468-201ENST00000516782 93 ntBASIC3.18□□□□□ -1.9
ZC3H3Q8IXZ2 AC093331.1-201ENST00000521474 169 ntBASIC3.18□□□□□ -1.9
ZC3H3Q8IXZ2 AC007834.2-201ENST00000536310 343 ntBASIC3.18□□□□□ -1.9
ZC3H3Q8IXZ2 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.18□□□□□ -1.9
ZC3H3Q8IXZ2 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.18□□□□□ -1.9
ZC3H3Q8IXZ2 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.18□□□□□ -1.9
ZC3H3Q8IXZ2 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.18□□□□□ -1.9
ZC3H3Q8IXZ2 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.18□□□□□ -1.9
ZC3H3Q8IXZ2 AP001004.1-201ENST00000582468 324 ntBASIC3.18□□□□□ -1.9
ZC3H3Q8IXZ2 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.18□□□□□ -1.9
ZC3H3Q8IXZ2 AL353778.1-201ENST00000603149 408 ntBASIC3.18□□□□□ -1.9
ZC3H3Q8IXZ2 AL355810.1-201ENST00000614629 552 ntBASIC3.18□□□□□ -1.9
ZC3H3Q8IXZ2 AL590099.1-201ENST00000615276 138 ntBASIC3.18□□□□□ -1.9
ZC3H3Q8IXZ2 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.18□□□□□ -1.9
ZC3H3Q8IXZ2 MIR6130-201ENST00000619419 109 ntBASIC3.18□□□□□ -1.9
ZC3H3Q8IXZ2 AL603755.1-201ENST00000619504 163 ntBASIC3.18□□□□□ -1.9
ZC3H3Q8IXZ2 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.18□□□□□ -1.9
ZC3H3Q8IXZ2 PCMTD1P7-201ENST00000634506 357 ntBASIC3.18□□□□□ -1.9
ZC3H3Q8IXZ2 AC007256.1-201ENST00000392253 2765 ntBASIC3.17□□□□□ -1.9
ZC3H3Q8IXZ2 AC118273.1-201ENST00000525324 3006 ntBASIC3.17□□□□□ -1.9
ZC3H3Q8IXZ2 AC012321.1-201ENST00000561622 1588 ntBASIC3.17□□□□□ -1.9
ZC3H3Q8IXZ2 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
ZC3H3Q8IXZ2 RNU6-173P-201ENST00000364215 104 ntBASIC3.17□□□□□ -1.9
ZC3H3Q8IXZ2 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
ZC3H3Q8IXZ2 SNORD116-8-201ENST00000384365 95 ntBASIC3.17□□□□□ -1.9
ZC3H3Q8IXZ2 AL590004.2-201ENST00000404787 371 ntBASIC3.17□□□□□ -1.9
ZC3H3Q8IXZ2 RNU4-72P-201ENST00000410754 173 ntBASIC3.17□□□□□ -1.9
ZC3H3Q8IXZ2 AC012498.1-201ENST00000424037 437 ntBASIC3.17□□□□□ -1.9
ZC3H3Q8IXZ2 RSU1P2-202ENST00000437884 485 ntBASIC3.17□□□□□ -1.9
ZC3H3Q8IXZ2 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.17□□□□□ -1.9
ZC3H3Q8IXZ2 AC112653.1-201ENST00000443851 386 ntBASIC3.17□□□□□ -1.9
ZC3H3Q8IXZ2 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.17□□□□□ -1.9
ZC3H3Q8IXZ2 ART2BP-201ENST00000453501 499 ntBASIC3.17□□□□□ -1.9
ZC3H3Q8IXZ2 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.17□□□□□ -1.9
ZC3H3Q8IXZ2 AL049873.1-201ENST00000480540 376 ntBASIC3.17□□□□□ -1.9
ZC3H3Q8IXZ2 AC010486.2-201ENST00000505572 483 ntBASIC3.17□□□□□ -1.9
ZC3H3Q8IXZ2 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.17□□□□□ -1.9
ZC3H3Q8IXZ2 AC017037.2-201ENST00000513850 890 ntBASIC3.17□□□□□ -1.9
ZC3H3Q8IXZ2 AC022483.1-201ENST00000514020 567 ntBASIC3.17□□□□□ -1.9
ZC3H3Q8IXZ2 MTCO2P32-201ENST00000514865 403 ntBASIC3.17□□□□□ -1.9
ZC3H3Q8IXZ2 RNU6-528P-201ENST00000516926 100 ntBASIC3.17□□□□□ -1.9
ZC3H3Q8IXZ2 AP000857.1-201ENST00000532151 543 ntBASIC3.17□□□□□ -1.9
ZC3H3Q8IXZ2 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.17□□□□□ -1.9
ZC3H3Q8IXZ2 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.17□□□□□ -1.9
ZC3H3Q8IXZ2 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.17□□□□□ -1.9
ZC3H3Q8IXZ2 AC008088.1-201ENST00000580993 280 ntBASIC3.17□□□□□ -1.9
ZC3H3Q8IXZ2 AC135507.2-201ENST00000612443 309 ntBASIC3.17□□□□□ -1.9
ZC3H3Q8IXZ2 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.17□□□□□ -1.9
ZC3H3Q8IXZ2 AC007671.2-201ENST00000637344 619 ntBASIC3.17□□□□□ -1.9
ZC3H3Q8IXZ2 TAB3P1-202ENST00000452645 1634 ntBASIC3.17□□□□□ -1.9
ZC3H3Q8IXZ2 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ZC3H3Q8IXZ2 AL136164.4-201ENST00000625013 2135 ntBASIC3.17□□□□□ -1.9
ZC3H3Q8IXZ2 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.17□□□□□ -1.9
ZC3H3Q8IXZ2 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
ZC3H3Q8IXZ2 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ZC3H3Q8IXZ2 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
ZC3H3Q8IXZ2 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ZC3H3Q8IXZ2 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
ZC3H3Q8IXZ2 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.16□□□□□ -1.9
ZC3H3Q8IXZ2 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
ZC3H3Q8IXZ2 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ZC3H3Q8IXZ2 RNY4P24-201ENST00000362735 96 ntBASIC3.16□□□□□ -1.9
ZC3H3Q8IXZ2 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.16□□□□□ -1.9
ZC3H3Q8IXZ2 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
ZC3H3Q8IXZ2 MIR135A2-201ENST00000384854 100 ntBASIC3.16□□□□□ -1.9
ZC3H3Q8IXZ2 RNU6-882P-201ENST00000391025 103 ntBASIC3.16□□□□□ -1.9
ZC3H3Q8IXZ2 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.16□□□□□ -1.9
ZC3H3Q8IXZ2 AL136372.1-201ENST00000403060 228 ntBASIC3.16□□□□□ -1.9
ZC3H3Q8IXZ2 AL138885.1-201ENST00000405921 675 ntBASIC3.16□□□□□ -1.9
ZC3H3Q8IXZ2 RNU2-43P-201ENST00000410306 190 ntBASIC3.16□□□□□ -1.9
ZC3H3Q8IXZ2 HMGB1P11-201ENST00000413899 637 ntBASIC3.16□□□□□ -1.9
ZC3H3Q8IXZ2 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.16□□□□□ -1.9
ZC3H3Q8IXZ2 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.16□□□□□ -1.9
ZC3H3Q8IXZ2 AC011233.1-201ENST00000422812 283 ntBASIC3.16□□□□□ -1.9
ZC3H3Q8IXZ2 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.16□□□□□ -1.9
ZC3H3Q8IXZ2 UBE2D3P1-201ENST00000436669 444 ntBASIC3.16□□□□□ -1.9
ZC3H3Q8IXZ2 LSM1P1-201ENST00000438629 273 ntBASIC3.16□□□□□ -1.9
ZC3H3Q8IXZ2 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.16□□□□□ -1.9
ZC3H3Q8IXZ2 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.16□□□□□ -1.9
ZC3H3Q8IXZ2 MTND2P22-201ENST00000444325 1033 ntBASIC3.16□□□□□ -1.9
ZC3H3Q8IXZ2 AP000542.1-201ENST00000448473 371 ntBASIC3.16□□□□□ -1.9
ZC3H3Q8IXZ2 AL133217.1-201ENST00000450980 425 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms