Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.51□□□□□ -2.01
CDKL3Q8IVW4 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.51□□□□□ -2.01
CDKL3Q8IVW4 AC006023.1-201ENST00000603944 259 ntBASIC2.51□□□□□ -2.01
CDKL3Q8IVW4 AC097504.2-201ENST00000608088 454 ntBASIC2.51□□□□□ -2.01
CDKL3Q8IVW4 AC010975.3-201ENST00000618727 978 ntBASIC2.51□□□□□ -2.01
CDKL3Q8IVW4 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.51□□□□□ -2.01
CDKL3Q8IVW4 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.51□□□□□ -2.01
CDKL3Q8IVW4 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CDKL3Q8IVW4 FRG1BP-201ENST00000278882 761 ntBASIC2.5□□□□□ -2.01
CDKL3Q8IVW4 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.5□□□□□ -2.01
CDKL3Q8IVW4 RNU6-224P-201ENST00000384055 107 ntBASIC2.5□□□□□ -2.01
CDKL3Q8IVW4 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
CDKL3Q8IVW4 RNU6-1000P-201ENST00000391066 106 ntBASIC2.5□□□□□ -2.01
CDKL3Q8IVW4 UBE2V1P2-201ENST00000397758 440 ntBASIC2.5□□□□□ -2.01
CDKL3Q8IVW4 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.5□□□□□ -2.01
CDKL3Q8IVW4 RNA5SP184-201ENST00000411071 108 ntBASIC2.5□□□□□ -2.01
CDKL3Q8IVW4 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.5□□□□□ -2.01
CDKL3Q8IVW4 NUP35P1-201ENST00000422734 947 ntBASIC2.5□□□□□ -2.01
CDKL3Q8IVW4 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.5□□□□□ -2.01
CDKL3Q8IVW4 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.5□□□□□ -2.01
CDKL3Q8IVW4 AC009296.1-201ENST00000443146 155 ntBASIC2.5□□□□□ -2.01
CDKL3Q8IVW4 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.5□□□□□ -2.01
CDKL3Q8IVW4 KC877373.1-201ENST00000479066 408 ntBASIC2.5□□□□□ -2.01
CDKL3Q8IVW4 AC010460.2-201ENST00000509054 677 ntBASIC2.5□□□□□ -2.01
CDKL3Q8IVW4 AC093752.1-206ENST00000511823 336 ntBASIC2.5□□□□□ -2.01
CDKL3Q8IVW4 RNU6-1261P-201ENST00000517194 104 ntBASIC2.5□□□□□ -2.01
CDKL3Q8IVW4 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.5□□□□□ -2.01
CDKL3Q8IVW4 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.5□□□□□ -2.01
CDKL3Q8IVW4 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC2.5□□□□□ -2.01
CDKL3Q8IVW4 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.5□□□□□ -2.01
CDKL3Q8IVW4 SETP7-201ENST00000552169 453 ntBASIC2.5□□□□□ -2.01
CDKL3Q8IVW4 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.5□□□□□ -2.01
CDKL3Q8IVW4 HMGB1P6-201ENST00000569046 646 ntBASIC2.5□□□□□ -2.01
CDKL3Q8IVW4 AC010546.1-201ENST00000569391 485 ntBASIC2.5□□□□□ -2.01
CDKL3Q8IVW4 MIR4672-201ENST00000583126 81 ntBASIC2.5□□□□□ -2.01
CDKL3Q8IVW4 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.5□□□□□ -2.01
CDKL3Q8IVW4 NRBF2P5-201ENST00000603087 788 ntBASIC2.5□□□□□ -2.01
CDKL3Q8IVW4 AL645944.1-201ENST00000603857 493 ntBASIC2.5□□□□□ -2.01
CDKL3Q8IVW4 AC025588.4-201ENST00000615802 908 ntBASIC2.5□□□□□ -2.01
CDKL3Q8IVW4 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.5□□□□□ -2.01
CDKL3Q8IVW4 MKKS-204ENST00000639674 192 ntBASIC2.5□□□□□ -2.01
CDKL3Q8IVW4 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CDKL3Q8IVW4 AC010680.1-201ENST00000590024 3590 ntBASIC2.5□□□□□ -2.01
CDKL3Q8IVW4 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.5□□□□□ -2.01
CDKL3Q8IVW4 PABPC1P9-201ENST00000426076 1612 ntBASIC2.5□□□□□ -2.01
CDKL3Q8IVW4 AP005901.5-201ENST00000545779 1796 ntBASIC2.49□□□□□ -2.01
CDKL3Q8IVW4 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
CDKL3Q8IVW4 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CDKL3Q8IVW4 MIR518C-201ENST00000384822 101 ntBASIC2.49□□□□□ -2.01
CDKL3Q8IVW4 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CDKL3Q8IVW4 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.49□□□□□ -2.01
CDKL3Q8IVW4 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.49□□□□□ -2.01
CDKL3Q8IVW4 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.49□□□□□ -2.01
CDKL3Q8IVW4 AC234781.2-201ENST00000426370 994 ntBASIC2.49□□□□□ -2.01
CDKL3Q8IVW4 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.49□□□□□ -2.01
CDKL3Q8IVW4 OR4K11P-201ENST00000431829 904 ntBASIC2.49□□□□□ -2.01
CDKL3Q8IVW4 FCF1P1-201ENST00000432690 571 ntBASIC2.49□□□□□ -2.01
CDKL3Q8IVW4 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.49□□□□□ -2.01
CDKL3Q8IVW4 AC129850.1-201ENST00000436203 508 ntBASIC2.49□□□□□ -2.01
CDKL3Q8IVW4 GTF2IP7-202ENST00000436677 309 ntBASIC2.49□□□□□ -2.01
CDKL3Q8IVW4 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.49□□□□□ -2.01
CDKL3Q8IVW4 RPS15AP7-201ENST00000439294 405 ntBASIC2.49□□□□□ -2.01
CDKL3Q8IVW4 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
CDKL3Q8IVW4 RPS27P26-201ENST00000494583 239 ntBASIC2.49□□□□□ -2.01
CDKL3Q8IVW4 AC135721.1-201ENST00000497954 479 ntBASIC2.49□□□□□ -2.01
CDKL3Q8IVW4 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.49□□□□□ -2.01
CDKL3Q8IVW4 AC113155.1-201ENST00000511141 769 ntBASIC2.49□□□□□ -2.01
CDKL3Q8IVW4 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.49□□□□□ -2.01
CDKL3Q8IVW4 AC087808.1-201ENST00000520501 361 ntBASIC2.49□□□□□ -2.01
CDKL3Q8IVW4 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.49□□□□□ -2.01
CDKL3Q8IVW4 MTND2P7-201ENST00000521337 640 ntBASIC2.49□□□□□ -2.01
CDKL3Q8IVW4 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.49□□□□□ -2.01
CDKL3Q8IVW4 MIR3921-201ENST00000577308 85 ntBASIC2.49□□□□□ -2.01
CDKL3Q8IVW4 AC061975.8-201ENST00000587058 721 ntBASIC2.49□□□□□ -2.01
CDKL3Q8IVW4 OR1M4P-201ENST00000589199 287 ntBASIC2.49□□□□□ -2.01
CDKL3Q8IVW4 AL035411.2-201ENST00000604022 421 ntBASIC2.49□□□□□ -2.01
CDKL3Q8IVW4 AC112220.2-201ENST00000605513 533 ntBASIC2.49□□□□□ -2.01
CDKL3Q8IVW4 AP000254.1-201ENST00000609934 520 ntBASIC2.49□□□□□ -2.01
CDKL3Q8IVW4 AC009237.15-201ENST00000610252 501 ntBASIC2.49□□□□□ -2.01
CDKL3Q8IVW4 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
CDKL3Q8IVW4 AC007998.5-201ENST00000622938 237 ntBASIC2.49□□□□□ -2.01
CDKL3Q8IVW4 AC027309.3-201ENST00000623419 351 ntBASIC2.49□□□□□ -2.01
CDKL3Q8IVW4 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.49□□□□□ -2.01
CDKL3Q8IVW4 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CDKL3Q8IVW4 OR4G11P-202ENST00000642116 1414 ntBASIC2.49□□□□□ -2.01
CDKL3Q8IVW4 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
CDKL3Q8IVW4 AC008568.2-201ENST00000623862 2313 ntBASIC2.48□□□□□ -2.01
CDKL3Q8IVW4 Z82209.1-201ENST00000422141 2135 ntBASIC2.48□□□□□ -2.01
CDKL3Q8IVW4 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CDKL3Q8IVW4 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CDKL3Q8IVW4 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
CDKL3Q8IVW4 Y_RNA.25-201ENST00000362528 102 ntBASIC2.48□□□□□ -2.01
CDKL3Q8IVW4 RNU1-105P-201ENST00000363470 161 ntBASIC2.48□□□□□ -2.01
CDKL3Q8IVW4 SNORD114-30-201ENST00000364448 72 ntBASIC2.48□□□□□ -2.01
CDKL3Q8IVW4 RNU6-198P-201ENST00000384258 104 ntBASIC2.48□□□□□ -2.01
CDKL3Q8IVW4 AL359511.1-201ENST00000402970 211 ntBASIC2.48□□□□□ -2.01
CDKL3Q8IVW4 MIR1290-201ENST00000408735 78 ntBASIC2.48□□□□□ -2.01
CDKL3Q8IVW4 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.48□□□□□ -2.01
CDKL3Q8IVW4 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.48□□□□□ -2.01
CDKL3Q8IVW4 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms