Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 AL592295.2-201ENST00000612578 206 ntBASIC4.4□□□□□ -1.71
COL23A1Q86Y22 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.4□□□□□ -1.71
COL23A1Q86Y22 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
COL23A1Q86Y22 AC099842.1-201ENST00000619919 596 ntBASIC4.4□□□□□ -1.71
COL23A1Q86Y22 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC4.4□□□□□ -1.71
COL23A1Q86Y22 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.4□□□□□ -1.71
COL23A1Q86Y22 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC4.4□□□□□ -1.71
COL23A1Q86Y22 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.4□□□□□ -1.71
COL23A1Q86Y22 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
COL23A1Q86Y22 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
COL23A1Q86Y22 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
COL23A1Q86Y22 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
COL23A1Q86Y22 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
COL23A1Q86Y22 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
COL23A1Q86Y22 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
COL23A1Q86Y22 MTND5P26-201ENST00000426018 1752 ntBASIC4.4□□□□□ -1.71
COL23A1Q86Y22 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
COL23A1Q86Y22 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
COL23A1Q86Y22 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
COL23A1Q86Y22 AC093536.2-201ENST00000565257 1406 ntBASIC4.39□□□□□ -1.71
COL23A1Q86Y22 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
COL23A1Q86Y22 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
COL23A1Q86Y22 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
COL23A1Q86Y22 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
COL23A1Q86Y22 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.39□□□□□ -1.71
COL23A1Q86Y22 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
COL23A1Q86Y22 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
COL23A1Q86Y22 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
COL23A1Q86Y22 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
COL23A1Q86Y22 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
COL23A1Q86Y22 MIR422A-201ENST00000362286 90 ntBASIC4.39□□□□□ -1.71
COL23A1Q86Y22 U3.15-201ENST00000365398 212 ntBASIC4.39□□□□□ -1.71
COL23A1Q86Y22 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
COL23A1Q86Y22 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
COL23A1Q86Y22 MTHFD2P2-201ENST00000407725 247 ntBASIC4.39□□□□□ -1.71
COL23A1Q86Y22 RN7SKP111-201ENST00000410349 271 ntBASIC4.39□□□□□ -1.71
COL23A1Q86Y22 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.39□□□□□ -1.71
COL23A1Q86Y22 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
COL23A1Q86Y22 AC063979.1-201ENST00000415539 377 ntBASIC4.39□□□□□ -1.71
COL23A1Q86Y22 MTCO3P12-201ENST00000416718 547 ntBASIC4.39□□□□□ -1.71
COL23A1Q86Y22 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.39□□□□□ -1.71
COL23A1Q86Y22 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.39□□□□□ -1.71
COL23A1Q86Y22 ARPC3P1-201ENST00000437218 533 ntBASIC4.39□□□□□ -1.71
COL23A1Q86Y22 AL359385.1-201ENST00000456509 365 ntBASIC4.39□□□□□ -1.71
COL23A1Q86Y22 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.39□□□□□ -1.71
COL23A1Q86Y22 RNU7-59P-201ENST00000459101 61 ntBASIC4.39□□□□□ -1.71
COL23A1Q86Y22 SRRM1P2-201ENST00000464531 1192 ntBASIC4.39□□□□□ -1.71
COL23A1Q86Y22 HMGB1P29-201ENST00000505659 499 ntBASIC4.39□□□□□ -1.71
COL23A1Q86Y22 VWA8P1-201ENST00000510889 176 ntBASIC4.39□□□□□ -1.71
COL23A1Q86Y22 AC010493.1-201ENST00000513479 292 ntBASIC4.39□□□□□ -1.71
COL23A1Q86Y22 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.39□□□□□ -1.71
COL23A1Q86Y22 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.39□□□□□ -1.71
COL23A1Q86Y22 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.39□□□□□ -1.71
COL23A1Q86Y22 AP003122.4-201ENST00000530980 758 ntBASIC4.39□□□□□ -1.71
COL23A1Q86Y22 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.39□□□□□ -1.71
COL23A1Q86Y22 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.39□□□□□ -1.71
COL23A1Q86Y22 AC136619.2-201ENST00000563361 631 ntBASIC4.39□□□□□ -1.71
COL23A1Q86Y22 AL391840.1-201ENST00000571144 367 ntBASIC4.39□□□□□ -1.71
COL23A1Q86Y22 AC099489.2-201ENST00000574976 260 ntBASIC4.39□□□□□ -1.71
COL23A1Q86Y22 MTND1P15-201ENST00000579262 949 ntBASIC4.39□□□□□ -1.71
COL23A1Q86Y22 COX6CP3-201ENST00000580869 223 ntBASIC4.39□□□□□ -1.71
COL23A1Q86Y22 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC4.39□□□□□ -1.71
COL23A1Q86Y22 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.39□□□□□ -1.71
COL23A1Q86Y22 UBE2L4-201ENST00000587688 464 ntBASIC4.39□□□□□ -1.71
COL23A1Q86Y22 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.39□□□□□ -1.71
COL23A1Q86Y22 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.39□□□□□ -1.71
COL23A1Q86Y22 HMGB1P50-201ENST00000605814 607 ntBASIC4.39□□□□□ -1.71
COL23A1Q86Y22 AL355472.4-201ENST00000610233 626 ntBASIC4.39□□□□□ -1.71
COL23A1Q86Y22 uc_338.12-201ENST00000616344 181 ntBASIC4.39□□□□□ -1.71
COL23A1Q86Y22 AL158801.5-201ENST00000623123 465 ntBASIC4.39□□□□□ -1.71
COL23A1Q86Y22 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.39□□□□□ -1.71
COL23A1Q86Y22 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
COL23A1Q86Y22 AC118273.1-201ENST00000525324 3006 ntBASIC4.39□□□□□ -1.71
COL23A1Q86Y22 IPO8P1-201ENST00000455509 3109 ntBASIC4.39□□□□□ -1.71
COL23A1Q86Y22 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.39□□□□□ -1.71
COL23A1Q86Y22 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
COL23A1Q86Y22 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
COL23A1Q86Y22 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
COL23A1Q86Y22 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.38□□□□□ -1.71
COL23A1Q86Y22 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL23A1Q86Y22 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL23A1Q86Y22 U8.3-201ENST00000363321 132 ntBASIC4.38□□□□□ -1.71
COL23A1Q86Y22 RNU6-1155P-201ENST00000363554 107 ntBASIC4.38□□□□□ -1.71
COL23A1Q86Y22 SNORA5B-201ENST00000363786 132 ntBASIC4.38□□□□□ -1.71
COL23A1Q86Y22 RNU5A-8P-201ENST00000364102 114 ntBASIC4.38□□□□□ -1.71
COL23A1Q86Y22 MIR181A1-201ENST00000385026 110 ntBASIC4.38□□□□□ -1.71
COL23A1Q86Y22 FCF1P9-201ENST00000412546 282 ntBASIC4.38□□□□□ -1.71
COL23A1Q86Y22 AC244098.2-201ENST00000422068 99 ntBASIC4.38□□□□□ -1.71
COL23A1Q86Y22 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.38□□□□□ -1.71
COL23A1Q86Y22 USP9YP15-201ENST00000442391 422 ntBASIC4.38□□□□□ -1.71
COL23A1Q86Y22 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.38□□□□□ -1.71
COL23A1Q86Y22 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.38□□□□□ -1.71
COL23A1Q86Y22 AC017037.2-201ENST00000513850 890 ntBASIC4.38□□□□□ -1.71
COL23A1Q86Y22 AC022483.1-201ENST00000514020 567 ntBASIC4.38□□□□□ -1.71
COL23A1Q86Y22 AC090281.1-201ENST00000523019 276 ntBASIC4.38□□□□□ -1.71
COL23A1Q86Y22 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.38□□□□□ -1.71
COL23A1Q86Y22 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.38□□□□□ -1.71
COL23A1Q86Y22 HMGN1P30-201ENST00000589286 268 ntBASIC4.38□□□□□ -1.71
COL23A1Q86Y22 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.38□□□□□ -1.71
COL23A1Q86Y22 AC107304.1-201ENST00000604229 296 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms