Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 RNU6-500P-201ENST00000362349 107 ntBASIC2.6□□□□□ -1.99
RAI1Q7Z5J4 RNU6-621P-201ENST00000364752 109 ntBASIC2.6□□□□□ -1.99
RAI1Q7Z5J4 SNORD116-9-201ENST00000384000 95 ntBASIC2.6□□□□□ -1.99
RAI1Q7Z5J4 SNORD116-3-201ENST00000384287 95 ntBASIC2.6□□□□□ -1.99
RAI1Q7Z5J4 SNORD116-7-201ENST00000384404 95 ntBASIC2.6□□□□□ -1.99
RAI1Q7Z5J4 SNORD116-5-201ENST00000384462 95 ntBASIC2.6□□□□□ -1.99
RAI1Q7Z5J4 DHFRP6-201ENST00000401776 268 ntBASIC2.6□□□□□ -1.99
RAI1Q7Z5J4 AC098592.1-201ENST00000419352 333 ntBASIC2.6□□□□□ -1.99
RAI1Q7Z5J4 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.6□□□□□ -1.99
RAI1Q7Z5J4 MTCO1P39-201ENST00000426148 480 ntBASIC2.6□□□□□ -1.99
RAI1Q7Z5J4 Z83846.1-201ENST00000446798 265 ntBASIC2.6□□□□□ -1.99
RAI1Q7Z5J4 AC234775.1-201ENST00000454247 670 ntBASIC2.6□□□□□ -1.99
RAI1Q7Z5J4 MTCO1P42-201ENST00000457379 726 ntBASIC2.6□□□□□ -1.99
RAI1Q7Z5J4 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.6□□□□□ -1.99
RAI1Q7Z5J4 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.6□□□□□ -1.99
RAI1Q7Z5J4 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.6□□□□□ -1.99
RAI1Q7Z5J4 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.6□□□□□ -1.99
RAI1Q7Z5J4 Y_RNA.688-201ENST00000516565 95 ntBASIC2.6□□□□□ -1.99
RAI1Q7Z5J4 RN7SKP282-201ENST00000516824 299 ntBASIC2.6□□□□□ -1.99
RAI1Q7Z5J4 RNU6-1231P-201ENST00000517185 103 ntBASIC2.6□□□□□ -1.99
RAI1Q7Z5J4 AC009812.2-201ENST00000517657 457 ntBASIC2.6□□□□□ -1.99
RAI1Q7Z5J4 AC104027.1-201ENST00000521887 300 ntBASIC2.6□□□□□ -1.99
RAI1Q7Z5J4 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RAI1Q7Z5J4 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.6□□□□□ -1.99
RAI1Q7Z5J4 SETP7-201ENST00000552169 453 ntBASIC2.6□□□□□ -1.99
RAI1Q7Z5J4 ROCK1P1-201ENST00000573767 549 ntBASIC2.6□□□□□ -1.99
RAI1Q7Z5J4 MIR3921-201ENST00000577308 85 ntBASIC2.6□□□□□ -1.99
RAI1Q7Z5J4 MIR5697-201ENST00000578045 78 ntBASIC2.6□□□□□ -1.99
RAI1Q7Z5J4 AP001029.3-201ENST00000588063 596 ntBASIC2.6□□□□□ -1.99
RAI1Q7Z5J4 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC2.6□□□□□ -1.99
RAI1Q7Z5J4 AC024153.1-201ENST00000603103 365 ntBASIC2.6□□□□□ -1.99
RAI1Q7Z5J4 AL670379.6-201ENST00000603753 252 ntBASIC2.6□□□□□ -1.99
RAI1Q7Z5J4 AL670379.11-201ENST00000604059 253 ntBASIC2.6□□□□□ -1.99
RAI1Q7Z5J4 AC008162.1-201ENST00000604718 254 ntBASIC2.6□□□□□ -1.99
RAI1Q7Z5J4 AL670379.1-201ENST00000604752 252 ntBASIC2.6□□□□□ -1.99
RAI1Q7Z5J4 AL670379.5-201ENST00000605253 252 ntBASIC2.6□□□□□ -1.99
RAI1Q7Z5J4 AL670379.12-201ENST00000605291 253 ntBASIC2.6□□□□□ -1.99
RAI1Q7Z5J4 AL670379.8-201ENST00000605353 252 ntBASIC2.6□□□□□ -1.99
RAI1Q7Z5J4 AL670379.7-201ENST00000605823 252 ntBASIC2.6□□□□□ -1.99
RAI1Q7Z5J4 AC107214.2-201ENST00000608204 634 ntBASIC2.6□□□□□ -1.99
RAI1Q7Z5J4 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.6□□□□□ -1.99
RAI1Q7Z5J4 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.6□□□□□ -1.99
RAI1Q7Z5J4 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
RAI1Q7Z5J4 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.59□□□□□ -1.99
RAI1Q7Z5J4 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
RAI1Q7Z5J4 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
RAI1Q7Z5J4 MIR22-201ENST00000362190 85 ntBASIC2.59□□□□□ -1.99
RAI1Q7Z5J4 RNU6-343P-201ENST00000364709 104 ntBASIC2.59□□□□□ -1.99
RAI1Q7Z5J4 RNU6-1197P-201ENST00000391183 107 ntBASIC2.59□□□□□ -1.99
RAI1Q7Z5J4 RPL7P25-201ENST00000404151 721 ntBASIC2.59□□□□□ -1.99
RAI1Q7Z5J4 Y_RNA.598-201ENST00000410480 95 ntBASIC2.59□□□□□ -1.99
RAI1Q7Z5J4 RNU2-37P-201ENST00000410695 177 ntBASIC2.59□□□□□ -1.99
RAI1Q7Z5J4 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC2.59□□□□□ -1.99
RAI1Q7Z5J4 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
RAI1Q7Z5J4 MTND1P20-201ENST00000430341 950 ntBASIC2.59□□□□□ -1.99
RAI1Q7Z5J4 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC2.59□□□□□ -1.99
RAI1Q7Z5J4 AC004866.2-201ENST00000438285 481 ntBASIC2.59□□□□□ -1.99
RAI1Q7Z5J4 MTND5P2-201ENST00000442927 1142 ntBASIC2.59□□□□□ -1.99
RAI1Q7Z5J4 RPL7P36-201ENST00000444633 681 ntBASIC2.59□□□□□ -1.99
RAI1Q7Z5J4 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.59□□□□□ -1.99
RAI1Q7Z5J4 COX6CP12-201ENST00000446748 202 ntBASIC2.59□□□□□ -1.99
RAI1Q7Z5J4 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.59□□□□□ -1.99
RAI1Q7Z5J4 AL033528.1-201ENST00000453780 140 ntBASIC2.59□□□□□ -1.99
RAI1Q7Z5J4 AP1S2P1-201ENST00000457344 379 ntBASIC2.59□□□□□ -1.99
RAI1Q7Z5J4 snoU13.8-201ENST00000458890 104 ntBASIC2.59□□□□□ -1.99
RAI1Q7Z5J4 HMGB1P36-201ENST00000487709 576 ntBASIC2.59□□□□□ -1.99
RAI1Q7Z5J4 AC022447.3-201ENST00000506865 495 ntBASIC2.59□□□□□ -1.99
RAI1Q7Z5J4 KLHL2P1-201ENST00000508691 521 ntBASIC2.59□□□□□ -1.99
RAI1Q7Z5J4 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC2.59□□□□□ -1.99
RAI1Q7Z5J4 MTND5P13-201ENST00000513046 1079 ntBASIC2.59□□□□□ -1.99
RAI1Q7Z5J4 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.59□□□□□ -1.99
RAI1Q7Z5J4 RNU2-58P-201ENST00000516403 183 ntBASIC2.59□□□□□ -1.99
RAI1Q7Z5J4 RN7SKP244-201ENST00000516513 307 ntBASIC2.59□□□□□ -1.99
RAI1Q7Z5J4 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.59□□□□□ -1.99
RAI1Q7Z5J4 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.59□□□□□ -1.99
RAI1Q7Z5J4 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.59□□□□□ -1.99
RAI1Q7Z5J4 MIR4319-201ENST00000577285 85 ntBASIC2.59□□□□□ -1.99
RAI1Q7Z5J4 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.59□□□□□ -1.99
RAI1Q7Z5J4 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.59□□□□□ -1.99
RAI1Q7Z5J4 AC007687.1-201ENST00000602704 304 ntBASIC2.59□□□□□ -1.99
RAI1Q7Z5J4 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.59□□□□□ -1.99
RAI1Q7Z5J4 AC116312.1-201ENST00000606841 314 ntBASIC2.59□□□□□ -1.99
RAI1Q7Z5J4 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.59□□□□□ -1.99
RAI1Q7Z5J4 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
RAI1Q7Z5J4 AC099506.2-201ENST00000623074 221 ntBASIC2.59□□□□□ -1.99
RAI1Q7Z5J4 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.59□□□□□ -1.99
RAI1Q7Z5J4 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.59□□□□□ -1.99
RAI1Q7Z5J4 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.59□□□□□ -2
RAI1Q7Z5J4 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.58□□□□□ -2
RAI1Q7Z5J4 UBE2L2-201ENST00000254302 429 ntBASIC2.58□□□□□ -2
RAI1Q7Z5J4 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
RAI1Q7Z5J4 RNU6-223P-201ENST00000362830 107 ntBASIC2.58□□□□□ -2
RAI1Q7Z5J4 Y_RNA.77-201ENST00000362962 107 ntBASIC2.58□□□□□ -2
RAI1Q7Z5J4 NFIB-202ENST00000380924 840 ntTSL 5 BASIC2.58□□□□□ -2
RAI1Q7Z5J4 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.58□□□□□ -2
RAI1Q7Z5J4 SNORA48.8-201ENST00000391324 134 ntBASIC2.58□□□□□ -2
RAI1Q7Z5J4 MIR1305-201ENST00000408300 86 ntBASIC2.58□□□□□ -2
RAI1Q7Z5J4 RNA5SP56-201ENST00000410277 118 ntBASIC2.58□□□□□ -2
RAI1Q7Z5J4 PIGPP2-201ENST00000411569 458 ntBASIC2.58□□□□□ -2
RAI1Q7Z5J4 AC078974.1-201ENST00000411597 223 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms