Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 AC008427.1-201ENST00000503102 655 ntBASIC2.08□□□□□ -2.08
SMARCD3Q6STE5 AC234781.5-201ENST00000508429 271 ntBASIC2.08□□□□□ -2.08
SMARCD3Q6STE5 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.08□□□□□ -2.08
SMARCD3Q6STE5 snoZ278.1-201ENST00000517059 112 ntBASIC2.08□□□□□ -2.08
SMARCD3Q6STE5 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.08□□□□□ -2.08
SMARCD3Q6STE5 AC104417.1-201ENST00000523974 751 ntBASIC2.08□□□□□ -2.08
SMARCD3Q6STE5 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.08□□□□□ -2.08
SMARCD3Q6STE5 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC2.08□□□□□ -2.08
SMARCD3Q6STE5 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.08□□□□□ -2.08
SMARCD3Q6STE5 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.08□□□□□ -2.08
SMARCD3Q6STE5 ISCA1P3-201ENST00000577104 373 ntBASIC2.08□□□□□ -2.08
SMARCD3Q6STE5 MIR5007-201ENST00000583098 95 ntBASIC2.08□□□□□ -2.08
SMARCD3Q6STE5 VN1R87P-201ENST00000596706 487 ntBASIC2.08□□□□□ -2.08
SMARCD3Q6STE5 AL606834.3-201ENST00000602615 496 ntBASIC2.08□□□□□ -2.08
SMARCD3Q6STE5 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.08□□□□□ -2.08
SMARCD3Q6STE5 AL158050.2-201ENST00000605336 568 ntBASIC2.08□□□□□ -2.08
SMARCD3Q6STE5 AL583856.2-201ENST00000606298 543 ntBASIC2.08□□□□□ -2.08
SMARCD3Q6STE5 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SMARCD3Q6STE5 AC018645.2-201ENST00000609151 472 ntBASIC2.08□□□□□ -2.08
SMARCD3Q6STE5 AP005137.2-201ENST00000609238 400 ntBASIC2.08□□□□□ -2.08
SMARCD3Q6STE5 AC046143.2-201ENST00000609789 160 ntBASIC2.08□□□□□ -2.08
SMARCD3Q6STE5 AC025588.4-201ENST00000615802 908 ntBASIC2.08□□□□□ -2.08
SMARCD3Q6STE5 MIR6766-201ENST00000622641 72 ntBASIC2.08□□□□□ -2.08
SMARCD3Q6STE5 AC027309.3-201ENST00000623419 351 ntBASIC2.08□□□□□ -2.08
SMARCD3Q6STE5 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.08□□□□□ -2.08
SMARCD3Q6STE5 AC010872.1-201ENST00000624225 675 ntBASIC2.08□□□□□ -2.08
SMARCD3Q6STE5 AC131280.1-202ENST00000624067 4211 ntBASIC2.08□□□□□ -2.08
SMARCD3Q6STE5 MTND4P35-201ENST00000604257 1375 ntBASIC2.08□□□□□ -2.08
SMARCD3Q6STE5 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
SMARCD3Q6STE5 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SMARCD3Q6STE5 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
SMARCD3Q6STE5 SNORD82-201ENST00000365530 70 ntBASIC2.07□□□□□ -2.08
SMARCD3Q6STE5 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SMARCD3Q6STE5 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SMARCD3Q6STE5 RNU1-52P-201ENST00000384190 164 ntBASIC2.07□□□□□ -2.08
SMARCD3Q6STE5 RNU6-549P-201ENST00000384433 107 ntBASIC2.07□□□□□ -2.08
SMARCD3Q6STE5 MIR122-201ENST00000385044 85 ntBASIC2.07□□□□□ -2.08
SMARCD3Q6STE5 MIR620-201ENST00000385232 95 ntBASIC2.07□□□□□ -2.08
SMARCD3Q6STE5 U3.29-201ENST00000391296 212 ntBASIC2.07□□□□□ -2.08
SMARCD3Q6STE5 RPL7P27-201ENST00000403775 720 ntBASIC2.07□□□□□ -2.08
SMARCD3Q6STE5 AL591416.1-201ENST00000404015 867 ntBASIC2.07□□□□□ -2.08
SMARCD3Q6STE5 AL449283.1-202ENST00000418249 604 ntBASIC2.07□□□□□ -2.08
SMARCD3Q6STE5 AL354692.1-201ENST00000423044 315 ntBASIC2.07□□□□□ -2.08
SMARCD3Q6STE5 AC233981.1-201ENST00000423224 461 ntBASIC2.07□□□□□ -2.08
SMARCD3Q6STE5 PTP4A1P7-201ENST00000423476 514 ntBASIC2.07□□□□□ -2.08
SMARCD3Q6STE5 NANOGP5-201ENST00000424456 877 ntBASIC2.07□□□□□ -2.08
SMARCD3Q6STE5 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.07□□□□□ -2.08
SMARCD3Q6STE5 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SMARCD3Q6STE5 WARS2P1-201ENST00000429678 537 ntBASIC2.07□□□□□ -2.08
SMARCD3Q6STE5 RPL31P54-201ENST00000429803 370 ntBASIC2.07□□□□□ -2.08
SMARCD3Q6STE5 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC2.07□□□□□ -2.08
SMARCD3Q6STE5 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.07□□□□□ -2.08
SMARCD3Q6STE5 snoU13.28-201ENST00000459235 104 ntBASIC2.07□□□□□ -2.08
SMARCD3Q6STE5 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC2.07□□□□□ -2.08
SMARCD3Q6STE5 AC104435.1-201ENST00000483483 166 ntBASIC2.07□□□□□ -2.08
SMARCD3Q6STE5 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
SMARCD3Q6STE5 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SMARCD3Q6STE5 AC118282.2-201ENST00000508739 374 ntBASIC2.07□□□□□ -2.08
SMARCD3Q6STE5 SNORA70.16-201ENST00000516390 95 ntBASIC2.07□□□□□ -2.08
SMARCD3Q6STE5 RNU6-885P-201ENST00000516607 104 ntBASIC2.07□□□□□ -2.08
SMARCD3Q6STE5 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.07□□□□□ -2.08
SMARCD3Q6STE5 AC023632.1-201ENST00000518463 375 ntBASIC2.07□□□□□ -2.08
SMARCD3Q6STE5 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.07□□□□□ -2.08
SMARCD3Q6STE5 RPL7P20-201ENST00000520308 745 ntBASIC2.07□□□□□ -2.08
SMARCD3Q6STE5 NDUFS5P6-201ENST00000529136 295 ntBASIC2.07□□□□□ -2.08
SMARCD3Q6STE5 AC118942.1-201ENST00000529674 1035 ntBASIC2.07□□□□□ -2.08
SMARCD3Q6STE5 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.07□□□□□ -2.08
SMARCD3Q6STE5 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.07□□□□□ -2.08
SMARCD3Q6STE5 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.07□□□□□ -2.08
SMARCD3Q6STE5 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.07□□□□□ -2.08
SMARCD3Q6STE5 AC044913.1-201ENST00000557200 430 ntBASIC2.07□□□□□ -2.08
SMARCD3Q6STE5 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.07□□□□□ -2.08
SMARCD3Q6STE5 SNORD39.3-201ENST00000584451 71 ntBASIC2.07□□□□□ -2.08
SMARCD3Q6STE5 BNIP3P39-201ENST00000601077 554 ntBASIC2.07□□□□□ -2.08
SMARCD3Q6STE5 AL022067.1-201ENST00000602426 454 ntBASIC2.07□□□□□ -2.08
SMARCD3Q6STE5 AL445435.1-201ENST00000604232 665 ntBASIC2.07□□□□□ -2.08
SMARCD3Q6STE5 AL121652.1-201ENST00000608851 448 ntBASIC2.07□□□□□ -2.08
SMARCD3Q6STE5 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.07□□□□□ -2.08
SMARCD3Q6STE5 AC245884.12-201ENST00000615364 59 ntBASIC2.07□□□□□ -2.08
SMARCD3Q6STE5 HMGB1P24-202ENST00000615653 685 ntBASIC2.07□□□□□ -2.08
SMARCD3Q6STE5 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.07□□□□□ -2.08
SMARCD3Q6STE5 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.07□□□□□ -2.08
SMARCD3Q6STE5 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
SMARCD3Q6STE5 AC087359.1-201ENST00000508335 1740 ntBASIC2.07□□□□□ -2.08
SMARCD3Q6STE5 AC008669.1-201ENST00000565823 2178 ntBASIC2.07□□□□□ -2.08
SMARCD3Q6STE5 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
SMARCD3Q6STE5 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SMARCD3Q6STE5 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SMARCD3Q6STE5 FTLP6-201ENST00000355274 422 ntBASIC2.06□□□□□ -2.08
SMARCD3Q6STE5 RNU6-582P-201ENST00000362989 107 ntBASIC2.06□□□□□ -2.08
SMARCD3Q6STE5 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.06□□□□□ -2.08
SMARCD3Q6STE5 SNORD116-23-201ENST00000384645 92 ntBASIC2.06□□□□□ -2.08
SMARCD3Q6STE5 MIR767-201ENST00000390228 109 ntBASIC2.06□□□□□ -2.08
SMARCD3Q6STE5 RPS4XP8-201ENST00000402039 771 ntBASIC2.06□□□□□ -2.08
SMARCD3Q6STE5 AL513331.1-201ENST00000411908 397 ntBASIC2.06□□□□□ -2.08
SMARCD3Q6STE5 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.06□□□□□ -2.08
SMARCD3Q6STE5 AL136133.1-201ENST00000413694 376 ntBASIC2.06□□□□□ -2.08
SMARCD3Q6STE5 USP9YP21-201ENST00000420603 432 ntBASIC2.06□□□□□ -2.08
SMARCD3Q6STE5 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC2.06□□□□□ -2.08
SMARCD3Q6STE5 NDUFB4P6-201ENST00000436819 366 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms