Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PRPF40BQ6NWY9 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.47□□□□□ -1.53
PRPF40BQ6NWY9 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
PRPF40BQ6NWY9 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
PRPF40BQ6NWY9 GABPAP-201ENST00000419271 1356 ntBASIC5.47□□□□□ -1.53
PRPF40BQ6NWY9 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.47□□□□□ -1.53
PRPF40BQ6NWY9 Y_RNA.187-201ENST00000363918 113 ntBASIC5.47□□□□□ -1.53
PRPF40BQ6NWY9 Y_RNA.197-201ENST00000364004 102 ntBASIC5.47□□□□□ -1.53
PRPF40BQ6NWY9 RNA5SP513-201ENST00000364648 118 ntBASIC5.47□□□□□ -1.53
PRPF40BQ6NWY9 SNORD115-7-201ENST00000365306 82 ntBASIC5.47□□□□□ -1.53
PRPF40BQ6NWY9 Y_RNA.576-201ENST00000384781 102 ntBASIC5.47□□□□□ -1.53
PRPF40BQ6NWY9 RPL30P3-201ENST00000424262 333 ntBASIC5.47□□□□□ -1.53
PRPF40BQ6NWY9 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC5.47□□□□□ -1.53
PRPF40BQ6NWY9 AC005094.1-201ENST00000440420 368 ntBASIC5.47□□□□□ -1.53
PRPF40BQ6NWY9 BX276092.4-201ENST00000452056 248 ntBASIC5.47□□□□□ -1.53
PRPF40BQ6NWY9 Y_RNA.653-201ENST00000459091 95 ntBASIC5.47□□□□□ -1.53
PRPF40BQ6NWY9 RPL23AP55-201ENST00000498163 452 ntBASIC5.47□□□□□ -1.53
PRPF40BQ6NWY9 CCDC34P1-201ENST00000507441 517 ntBASIC5.47□□□□□ -1.53
PRPF40BQ6NWY9 MTCO3P44-201ENST00000510977 541 ntBASIC5.47□□□□□ -1.53
PRPF40BQ6NWY9 RNU6-988P-201ENST00000519081 107 ntBASIC5.47□□□□□ -1.53
PRPF40BQ6NWY9 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC5.47□□□□□ -1.53
PRPF40BQ6NWY9 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.47□□□□□ -1.53
PRPF40BQ6NWY9 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
PRPF40BQ6NWY9 TVP23BP1-201ENST00000557500 617 ntBASIC5.47□□□□□ -1.53
PRPF40BQ6NWY9 MIR4286-201ENST00000580651 93 ntBASIC5.47□□□□□ -1.53
PRPF40BQ6NWY9 AC022893.3-201ENST00000607665 437 ntBASIC5.47□□□□□ -1.53
PRPF40BQ6NWY9 SNORD91B-202ENST00000608459 222 ntBASIC5.47□□□□□ -1.53
PRPF40BQ6NWY9 Z82243.1-201ENST00000609432 473 ntBASIC5.47□□□□□ -1.53
PRPF40BQ6NWY9 AC006329.2-201ENST00000611491 394 ntBASIC5.47□□□□□ -1.53
PRPF40BQ6NWY9 AP001486.3-201ENST00000615334 372 ntBASIC5.47□□□□□ -1.53
PRPF40BQ6NWY9 MIR6875-201ENST00000617506 72 ntBASIC5.47□□□□□ -1.53
PRPF40BQ6NWY9 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.47□□□□□ -1.53
PRPF40BQ6NWY9 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PRPF40BQ6NWY9 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PRPF40BQ6NWY9 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.47□□□□□ -1.53
PRPF40BQ6NWY9 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PRPF40BQ6NWY9 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.46□□□□□ -1.53
PRPF40BQ6NWY9 API5P2-201ENST00000397055 1498 ntBASIC5.46□□□□□ -1.53
PRPF40BQ6NWY9 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.53
PRPF40BQ6NWY9 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
PRPF40BQ6NWY9 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
PRPF40BQ6NWY9 MIR208A-201ENST00000362287 71 ntBASIC5.46□□□□□ -1.54
PRPF40BQ6NWY9 Y_RNA.395-201ENST00000383945 109 ntBASIC5.46□□□□□ -1.54
PRPF40BQ6NWY9 MIR3065-201ENST00000390137 79 ntBASIC5.46□□□□□ -1.54
PRPF40BQ6NWY9 RNU6-308P-201ENST00000390957 107 ntBASIC5.46□□□□□ -1.54
PRPF40BQ6NWY9 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.46□□□□□ -1.54
PRPF40BQ6NWY9 AC114491.1-201ENST00000416095 246 ntBASIC5.46□□□□□ -1.54
PRPF40BQ6NWY9 AC005517.2-201ENST00000424673 553 ntBASIC5.46□□□□□ -1.54
PRPF40BQ6NWY9 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.46□□□□□ -1.54
PRPF40BQ6NWY9 RPL7P2-201ENST00000427639 268 ntBASIC5.46□□□□□ -1.54
PRPF40BQ6NWY9 AC008065.1-201ENST00000428525 348 ntBASIC5.46□□□□□ -1.54
PRPF40BQ6NWY9 RPL21P91-201ENST00000429231 479 ntBASIC5.46□□□□□ -1.54
PRPF40BQ6NWY9 GEMIN8P3-201ENST00000445417 720 ntBASIC5.46□□□□□ -1.54
PRPF40BQ6NWY9 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.46□□□□□ -1.54
PRPF40BQ6NWY9 AL162151.2-201ENST00000448875 158 ntBASIC5.46□□□□□ -1.54
PRPF40BQ6NWY9 AC012671.1-201ENST00000451912 203 ntBASIC5.46□□□□□ -1.54
PRPF40BQ6NWY9 AC005008.1-201ENST00000456151 612 ntBASIC5.46□□□□□ -1.54
PRPF40BQ6NWY9 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC5.46□□□□□ -1.54
PRPF40BQ6NWY9 AC135721.1-201ENST00000497954 479 ntBASIC5.46□□□□□ -1.54
PRPF40BQ6NWY9 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.46□□□□□ -1.54
PRPF40BQ6NWY9 AC005798.1-201ENST00000513715 387 ntBASIC5.46□□□□□ -1.54
PRPF40BQ6NWY9 RNA5SP49-201ENST00000516450 115 ntBASIC5.46□□□□□ -1.54
PRPF40BQ6NWY9 RNU6-1046P-201ENST00000516538 107 ntBASIC5.46□□□□□ -1.54
PRPF40BQ6NWY9 RNU6-1092P-201ENST00000516955 87 ntBASIC5.46□□□□□ -1.54
PRPF40BQ6NWY9 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.46□□□□□ -1.54
PRPF40BQ6NWY9 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.46□□□□□ -1.54
PRPF40BQ6NWY9 RN7SL703P-201ENST00000578485 302 ntBASIC5.46□□□□□ -1.54
PRPF40BQ6NWY9 AC100830.2-201ENST00000581636 240 ntBASIC5.46□□□□□ -1.54
PRPF40BQ6NWY9 RPL7P50-201ENST00000600588 727 ntBASIC5.46□□□□□ -1.54
PRPF40BQ6NWY9 AC024220.1-201ENST00000603675 484 ntBASIC5.46□□□□□ -1.54
PRPF40BQ6NWY9 AC012443.1-201ENST00000605605 231 ntBASIC5.46□□□□□ -1.54
PRPF40BQ6NWY9 AC133104.2-201ENST00000615272 193 ntBASIC5.46□□□□□ -1.54
PRPF40BQ6NWY9 MIR6075-201ENST00000620782 95 ntBASIC5.46□□□□□ -1.54
PRPF40BQ6NWY9 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC5.46□□□□□ -1.54
PRPF40BQ6NWY9 AL357559.1-201ENST00000622228 274 ntBASIC5.46□□□□□ -1.54
PRPF40BQ6NWY9 AC138305.3-201ENST00000624988 240 ntBASIC5.46□□□□□ -1.54
PRPF40BQ6NWY9 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
PRPF40BQ6NWY9 AC007823.1-201ENST00000569932 1566 ntBASIC5.46□□□□□ -1.54
PRPF40BQ6NWY9 AC121333.1-201ENST00000567488 2709 ntBASIC5.46□□□□□ -1.54
PRPF40BQ6NWY9 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
PRPF40BQ6NWY9 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
PRPF40BQ6NWY9 MAPK10-303ENST00000641324 3959 ntBASIC5.45□□□□□ -1.54
PRPF40BQ6NWY9 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
PRPF40BQ6NWY9 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
PRPF40BQ6NWY9 RNU6-82P-201ENST00000363970 107 ntBASIC5.45□□□□□ -1.54
PRPF40BQ6NWY9 RNU6-61P-201ENST00000365528 109 ntBASIC5.45□□□□□ -1.54
PRPF40BQ6NWY9 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PRPF40BQ6NWY9 MIR195-201ENST00000385194 87 ntBASIC5.45□□□□□ -1.54
PRPF40BQ6NWY9 MT-TC-201ENST00000387405 66 ntBASIC5.45□□□□□ -1.54
PRPF40BQ6NWY9 RNU11-4P-201ENST00000391149 133 ntBASIC5.45□□□□□ -1.54
PRPF40BQ6NWY9 RNU6-387P-201ENST00000411331 105 ntBASIC5.45□□□□□ -1.54
PRPF40BQ6NWY9 OFD1P1Y-201ENST00000411756 1225 ntBASIC5.45□□□□□ -1.54
PRPF40BQ6NWY9 POLHP1-201ENST00000411806 470 ntBASIC5.45□□□□□ -1.54
PRPF40BQ6NWY9 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC5.45□□□□□ -1.54
PRPF40BQ6NWY9 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC5.45□□□□□ -1.54
PRPF40BQ6NWY9 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC5.45□□□□□ -1.54
PRPF40BQ6NWY9 RPL7P46-201ENST00000425129 740 ntBASIC5.45□□□□□ -1.54
PRPF40BQ6NWY9 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC5.45□□□□□ -1.54
PRPF40BQ6NWY9 AC234775.1-201ENST00000454247 670 ntBASIC5.45□□□□□ -1.54
PRPF40BQ6NWY9 RPL30P15-201ENST00000457129 321 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms