Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.42□□□□□ -1.7
CDPF1Q6NVV7 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC4.42□□□□□ -1.7
CDPF1Q6NVV7 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC4.42□□□□□ -1.7
CDPF1Q6NVV7 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC4.42□□□□□ -1.7
CDPF1Q6NVV7 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC4.42□□□□□ -1.7
CDPF1Q6NVV7 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.42□□□□□ -1.7
CDPF1Q6NVV7 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC4.42□□□□□ -1.7
CDPF1Q6NVV7 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.42□□□□□ -1.7
CDPF1Q6NVV7 AC022968.1-201ENST00000567372 442 ntBASIC4.42□□□□□ -1.7
CDPF1Q6NVV7 AC090617.3-201ENST00000573670 475 ntBASIC4.42□□□□□ -1.7
CDPF1Q6NVV7 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.42□□□□□ -1.7
CDPF1Q6NVV7 AC023575.1-201ENST00000580510 358 ntBASIC4.42□□□□□ -1.7
CDPF1Q6NVV7 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.42□□□□□ -1.7
CDPF1Q6NVV7 AC008121.1-201ENST00000603244 268 ntBASIC4.42□□□□□ -1.7
CDPF1Q6NVV7 AL139395.1-201ENST00000603662 160 ntBASIC4.42□□□□□ -1.7
CDPF1Q6NVV7 B3GNTL1P2-201ENST00000603673 288 ntBASIC4.42□□□□□ -1.7
CDPF1Q6NVV7 AC093799.2-201ENST00000610062 578 ntBASIC4.42□□□□□ -1.7
CDPF1Q6NVV7 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC4.42□□□□□ -1.7
CDPF1Q6NVV7 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
CDPF1Q6NVV7 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.42□□□□□ -1.7
CDPF1Q6NVV7 LINC01613-201ENST00000561476 2780 ntBASIC4.42□□□□□ -1.7
CDPF1Q6NVV7 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CDPF1Q6NVV7 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.41□□□□□ -1.7
CDPF1Q6NVV7 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC4.41□□□□□ -1.7
CDPF1Q6NVV7 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.41□□□□□ -1.7
CDPF1Q6NVV7 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDPF1Q6NVV7 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDPF1Q6NVV7 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.41□□□□□ -1.7
CDPF1Q6NVV7 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC4.41□□□□□ -1.7
CDPF1Q6NVV7 HAUS6P2-201ENST00000433254 2404 ntBASIC4.41□□□□□ -1.7
CDPF1Q6NVV7 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CDPF1Q6NVV7 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDPF1Q6NVV7 RNU6-858P-201ENST00000362436 107 ntBASIC4.41□□□□□ -1.7
CDPF1Q6NVV7 RNU6-1301P-201ENST00000362724 104 ntBASIC4.41□□□□□ -1.7
CDPF1Q6NVV7 RNU1-65P-201ENST00000363919 148 ntBASIC4.41□□□□□ -1.7
CDPF1Q6NVV7 RNA5SP232-201ENST00000364144 119 ntBASIC4.41□□□□□ -1.7
CDPF1Q6NVV7 RNA5SP485-201ENST00000365053 119 ntBASIC4.41□□□□□ -1.7
CDPF1Q6NVV7 RNU6-326P-201ENST00000365480 107 ntBASIC4.41□□□□□ -1.7
CDPF1Q6NVV7 RNU6-47P-201ENST00000383866 107 ntBASIC4.41□□□□□ -1.7
CDPF1Q6NVV7 Y_RNA.504-201ENST00000384481 104 ntBASIC4.41□□□□□ -1.7
CDPF1Q6NVV7 SNORA53-201ENST00000391141 249 ntBASIC4.41□□□□□ -1.7
CDPF1Q6NVV7 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDPF1Q6NVV7 RPL21P40-201ENST00000428586 483 ntBASIC4.41□□□□□ -1.7
CDPF1Q6NVV7 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.41□□□□□ -1.7
CDPF1Q6NVV7 AL627311.1-201ENST00000431514 115 ntBASIC4.41□□□□□ -1.7
CDPF1Q6NVV7 CYCSP6-201ENST00000434498 302 ntBASIC4.41□□□□□ -1.7
CDPF1Q6NVV7 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC4.41□□□□□ -1.7
CDPF1Q6NVV7 RPL23AP28-201ENST00000448062 470 ntBASIC4.41□□□□□ -1.7
CDPF1Q6NVV7 RPL21P104-201ENST00000464143 478 ntBASIC4.41□□□□□ -1.7
CDPF1Q6NVV7 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.41□□□□□ -1.7
CDPF1Q6NVV7 AC022133.1-201ENST00000490961 571 ntBASIC4.41□□□□□ -1.7
CDPF1Q6NVV7 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.41□□□□□ -1.7
CDPF1Q6NVV7 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.41□□□□□ -1.7
CDPF1Q6NVV7 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.41□□□□□ -1.7
CDPF1Q6NVV7 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CDPF1Q6NVV7 AC005476.1-201ENST00000554427 397 ntBASIC4.41□□□□□ -1.7
CDPF1Q6NVV7 AC025884.1-201ENST00000556034 378 ntBASIC4.41□□□□□ -1.7
CDPF1Q6NVV7 AP001485.1-201ENST00000604799 199 ntBASIC4.41□□□□□ -1.7
CDPF1Q6NVV7 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.41□□□□□ -1.7
CDPF1Q6NVV7 AL133481.2-203ENST00000607558 139 ntBASIC4.41□□□□□ -1.7
CDPF1Q6NVV7 AL589743.6-201ENST00000611025 117 ntBASIC4.41□□□□□ -1.7
CDPF1Q6NVV7 U6.106-201ENST00000636360 105 ntBASIC4.41□□□□□ -1.7
CDPF1Q6NVV7 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
CDPF1Q6NVV7 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.41□□□□□ -1.7
CDPF1Q6NVV7 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC4.41□□□□□ -1.7
CDPF1Q6NVV7 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CDPF1Q6NVV7 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC4.41□□□□□ -1.7
CDPF1Q6NVV7 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDPF1Q6NVV7 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.41□□□□□ -1.7
CDPF1Q6NVV7 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
CDPF1Q6NVV7 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CDPF1Q6NVV7 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.4□□□□□ -1.7
CDPF1Q6NVV7 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
CDPF1Q6NVV7 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.4□□□□□ -1.7
CDPF1Q6NVV7 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
CDPF1Q6NVV7 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CDPF1Q6NVV7 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CDPF1Q6NVV7 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.4□□□□□ -1.7
CDPF1Q6NVV7 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CDPF1Q6NVV7 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CDPF1Q6NVV7 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CDPF1Q6NVV7 COX6B1P3-201ENST00000312310 260 ntBASIC4.4□□□□□ -1.71
CDPF1Q6NVV7 RNA5SP140-201ENST00000364524 92 ntBASIC4.4□□□□□ -1.71
CDPF1Q6NVV7 Y_RNA.292-201ENST00000364904 97 ntBASIC4.4□□□□□ -1.71
CDPF1Q6NVV7 RNA5SP85-201ENST00000365378 119 ntBASIC4.4□□□□□ -1.71
CDPF1Q6NVV7 RNU6ATAC15P-201ENST00000408279 121 ntBASIC4.4□□□□□ -1.71
CDPF1Q6NVV7 MIR1271-201ENST00000408537 86 ntBASIC4.4□□□□□ -1.71
CDPF1Q6NVV7 Y_RNA.623-201ENST00000411128 95 ntBASIC4.4□□□□□ -1.71
CDPF1Q6NVV7 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.4□□□□□ -1.71
CDPF1Q6NVV7 AC099782.1-201ENST00000425889 474 ntBASIC4.4□□□□□ -1.71
CDPF1Q6NVV7 AL590128.1-201ENST00000433407 286 ntBASIC4.4□□□□□ -1.71
CDPF1Q6NVV7 COL11A2P1-205ENST00000441798 676 ntBASIC4.4□□□□□ -1.71
CDPF1Q6NVV7 PFN1P11-201ENST00000445829 389 ntBASIC4.4□□□□□ -1.71
CDPF1Q6NVV7 AL359073.1-201ENST00000448036 403 ntBASIC4.4□□□□□ -1.71
CDPF1Q6NVV7 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.4□□□□□ -1.71
CDPF1Q6NVV7 RN7SL362P-201ENST00000494228 267 ntBASIC4.4□□□□□ -1.71
CDPF1Q6NVV7 AC022206.1-201ENST00000495947 347 ntBASIC4.4□□□□□ -1.71
CDPF1Q6NVV7 AC093870.1-201ENST00000506837 213 ntBASIC4.4□□□□□ -1.71
CDPF1Q6NVV7 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC4.4□□□□□ -1.71
CDPF1Q6NVV7 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 139 ms