Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 RNU6-878P-201ENST00000384578 110 ntBASIC3.18□□□□□ -1.9
PTCH1Q13635 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.18□□□□□ -1.9
PTCH1Q13635 RAC1P8-201ENST00000427086 527 ntBASIC3.18□□□□□ -1.9
PTCH1Q13635 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.18□□□□□ -1.9
PTCH1Q13635 AC092427.1-202ENST00000430569 476 ntBASIC3.18□□□□□ -1.9
PTCH1Q13635 AC015908.1-201ENST00000478739 476 ntBASIC3.18□□□□□ -1.9
PTCH1Q13635 RNA5SP445-201ENST00000515889 115 ntBASIC3.18□□□□□ -1.9
PTCH1Q13635 AP003355.1-201ENST00000518956 587 ntBASIC3.18□□□□□ -1.9
PTCH1Q13635 AC087894.1-201ENST00000538359 518 ntBASIC3.18□□□□□ -1.9
PTCH1Q13635 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PTCH1Q13635 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.18□□□□□ -1.9
PTCH1Q13635 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.18□□□□□ -1.9
PTCH1Q13635 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.18□□□□□ -1.9
PTCH1Q13635 MIR4781-201ENST00000585250 76 ntBASIC3.18□□□□□ -1.9
PTCH1Q13635 AL160237.3-201ENST00000604114 1013 ntBASIC3.18□□□□□ -1.9
PTCH1Q13635 AC106900.2-201ENST00000604994 317 ntBASIC3.18□□□□□ -1.9
PTCH1Q13635 AP000240.1-201ENST00000609910 452 ntBASIC3.18□□□□□ -1.9
PTCH1Q13635 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.18□□□□□ -1.9
PTCH1Q13635 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PTCH1Q13635 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.18□□□□□ -1.9
PTCH1Q13635 AC090897.3-201ENST00000636973 1157 ntBASIC3.18□□□□□ -1.9
PTCH1Q13635 MFSD8-245ENST00000641743 948 ntBASIC3.18□□□□□ -1.9
PTCH1Q13635 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
PTCH1Q13635 AC090740.1-201ENST00000623193 2262 ntBASIC3.17□□□□□ -1.9
PTCH1Q13635 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.17□□□□□ -1.9
PTCH1Q13635 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
PTCH1Q13635 Y_RNA.40-201ENST00000362645 93 ntBASIC3.17□□□□□ -1.9
PTCH1Q13635 SNORA80E-201ENST00000384744 137 ntBASIC3.17□□□□□ -1.9
PTCH1Q13635 MCTS2P-201ENST00000394552 546 ntBASIC3.17□□□□□ -1.9
PTCH1Q13635 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.17□□□□□ -1.9
PTCH1Q13635 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.17□□□□□ -1.9
PTCH1Q13635 MTATP6P4-201ENST00000427725 675 ntBASIC3.17□□□□□ -1.9
PTCH1Q13635 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
PTCH1Q13635 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.17□□□□□ -1.9
PTCH1Q13635 RFC5P1-201ENST00000454419 874 ntBASIC3.17□□□□□ -1.9
PTCH1Q13635 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.17□□□□□ -1.9
PTCH1Q13635 RNA5SP310-201ENST00000459084 116 ntBASIC3.17□□□□□ -1.9
PTCH1Q13635 XKRY-201ENST00000510392 1100 ntBASIC3.17□□□□□ -1.9
PTCH1Q13635 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.17□□□□□ -1.9
PTCH1Q13635 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.17□□□□□ -1.9
PTCH1Q13635 AL583856.2-201ENST00000606298 543 ntBASIC3.17□□□□□ -1.9
PTCH1Q13635 AP000943.4-201ENST00000622912 357 ntBASIC3.17□□□□□ -1.9
PTCH1Q13635 AC109454.4-201ENST00000623411 649 ntBASIC3.17□□□□□ -1.9
PTCH1Q13635 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.17□□□□□ -1.9
PTCH1Q13635 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.17□□□□□ -1.9
PTCH1Q13635 AC087821.2-201ENST00000637086 450 ntBASIC3.17□□□□□ -1.9
PTCH1Q13635 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PTCH1Q13635 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.16□□□□□ -1.9
PTCH1Q13635 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.16□□□□□ -1.9
PTCH1Q13635 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PTCH1Q13635 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PTCH1Q13635 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
PTCH1Q13635 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.16□□□□□ -1.9
PTCH1Q13635 RNU5B-4P-201ENST00000363508 111 ntBASIC3.16□□□□□ -1.9
PTCH1Q13635 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.16□□□□□ -1.9
PTCH1Q13635 AC027644.1-201ENST00000419595 298 ntBASIC3.16□□□□□ -1.9
PTCH1Q13635 PTP4A1P7-201ENST00000423476 514 ntBASIC3.16□□□□□ -1.9
PTCH1Q13635 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.16□□□□□ -1.9
PTCH1Q13635 AL645638.1-201ENST00000440519 361 ntBASIC3.16□□□□□ -1.9
PTCH1Q13635 VN1R10P-201ENST00000447106 875 ntBASIC3.16□□□□□ -1.9
PTCH1Q13635 COX6CP18-201ENST00000448769 222 ntBASIC3.16□□□□□ -1.9
PTCH1Q13635 AC092757.1-201ENST00000467293 467 ntBASIC3.16□□□□□ -1.9
PTCH1Q13635 AC026414.1-201ENST00000504046 698 ntBASIC3.16□□□□□ -1.9
PTCH1Q13635 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.16□□□□□ -1.9
PTCH1Q13635 HMGB1P41-201ENST00000520234 440 ntBASIC3.16□□□□□ -1.9
PTCH1Q13635 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.16□□□□□ -1.9
PTCH1Q13635 AC104417.1-201ENST00000523974 751 ntBASIC3.16□□□□□ -1.9
PTCH1Q13635 AP001189.2-201ENST00000527320 189 ntBASIC3.16□□□□□ -1.9
PTCH1Q13635 AC007536.1-201ENST00000533382 349 ntBASIC3.16□□□□□ -1.9
PTCH1Q13635 OR4T1P-201ENST00000554933 911 ntBASIC3.16□□□□□ -1.9
PTCH1Q13635 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC3.16□□□□□ -1.9
PTCH1Q13635 AC135628.1-201ENST00000568867 534 ntBASIC3.16□□□□□ -1.9
PTCH1Q13635 AC105137.2-201ENST00000569073 466 ntBASIC3.16□□□□□ -1.9
PTCH1Q13635 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.16□□□□□ -1.9
PTCH1Q13635 AL133393.1-201ENST00000603277 287 ntBASIC3.16□□□□□ -1.9
PTCH1Q13635 AC073387.2-201ENST00000604797 784 ntBASIC3.16□□□□□ -1.9
PTCH1Q13635 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.16□□□□□ -1.9
PTCH1Q13635 AL158211.2-201ENST00000607282 395 ntBASIC3.16□□□□□ -1.9
PTCH1Q13635 AC024933.1-201ENST00000608472 348 ntBASIC3.16□□□□□ -1.9
PTCH1Q13635 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.16□□□□□ -1.9
PTCH1Q13635 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.16□□□□□ -1.9
PTCH1Q13635 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.15□□□□□ -1.91
PTCH1Q13635 SNORA63.3-201ENST00000362682 132 ntBASIC3.15□□□□□ -1.91
PTCH1Q13635 RNU6-236P-201ENST00000363886 106 ntBASIC3.15□□□□□ -1.91
PTCH1Q13635 SUGT1P1-201ENST00000379514 476 ntBASIC3.15□□□□□ -1.91
PTCH1Q13635 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
PTCH1Q13635 RNU6-657P-201ENST00000383904 107 ntBASIC3.15□□□□□ -1.91
PTCH1Q13635 RPS15AP38-201ENST00000413110 372 ntBASIC3.15□□□□□ -1.91
PTCH1Q13635 HSPE1P1-201ENST00000421494 318 ntBASIC3.15□□□□□ -1.91
PTCH1Q13635 DPRXP1-201ENST00000426312 460 ntBASIC3.15□□□□□ -1.91
PTCH1Q13635 AC092634.2-201ENST00000428146 1010 ntBASIC3.15□□□□□ -1.91
PTCH1Q13635 RPS15AP28-201ENST00000435088 386 ntBASIC3.15□□□□□ -1.91
PTCH1Q13635 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PTCH1Q13635 AC004866.2-201ENST00000438285 481 ntBASIC3.15□□□□□ -1.91
PTCH1Q13635 RPL39P40-201ENST00000445481 146 ntBASIC3.15□□□□□ -1.91
PTCH1Q13635 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.15□□□□□ -1.91
PTCH1Q13635 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.15□□□□□ -1.91
PTCH1Q13635 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.15□□□□□ -1.91
PTCH1Q13635 AC010460.2-201ENST00000509054 677 ntBASIC3.15□□□□□ -1.91
PTCH1Q13635 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms