Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 MTND4P25-201ENST00000441039 533 ntBASIC3.96□□□□□ -1.78
NKX6-1P78426 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.96□□□□□ -1.78
NKX6-1P78426 ISCUP1-201ENST00000454451 448 ntBASIC3.96□□□□□ -1.78
NKX6-1P78426 SNORA84-201ENST00000459229 133 ntBASIC3.96□□□□□ -1.78
NKX6-1P78426 AC116533.1-201ENST00000459748 321 ntBASIC3.96□□□□□ -1.78
NKX6-1P78426 RPL21P126-201ENST00000470049 478 ntBASIC3.96□□□□□ -1.78
NKX6-1P78426 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.96□□□□□ -1.78
NKX6-1P78426 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.96□□□□□ -1.78
NKX6-1P78426 VWA8P1-201ENST00000510889 176 ntBASIC3.96□□□□□ -1.78
NKX6-1P78426 RNU6-927P-201ENST00000516199 100 ntBASIC3.96□□□□□ -1.78
NKX6-1P78426 SCARNA15.2-201ENST00000516409 127 ntBASIC3.96□□□□□ -1.78
NKX6-1P78426 Y_RNA.689-201ENST00000516589 107 ntBASIC3.96□□□□□ -1.78
NKX6-1P78426 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.96□□□□□ -1.78
NKX6-1P78426 MRPL49P2-201ENST00000521066 465 ntBASIC3.96□□□□□ -1.78
NKX6-1P78426 SUB1P1-201ENST00000524415 382 ntBASIC3.96□□□□□ -1.78
NKX6-1P78426 AP005435.4-201ENST00000529514 284 ntBASIC3.96□□□□□ -1.78
NKX6-1P78426 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.96□□□□□ -1.78
NKX6-1P78426 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.96□□□□□ -1.78
NKX6-1P78426 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.96□□□□□ -1.78
NKX6-1P78426 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.96□□□□□ -1.78
NKX6-1P78426 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.96□□□□□ -1.78
NKX6-1P78426 AC034105.4-201ENST00000568304 277 ntBASIC3.96□□□□□ -1.78
NKX6-1P78426 AL670379.4-201ENST00000605279 254 ntBASIC3.96□□□□□ -1.78
NKX6-1P78426 AC007619.2-201ENST00000605743 379 ntBASIC3.96□□□□□ -1.78
NKX6-1P78426 AC012409.4-201ENST00000612923 249 ntBASIC3.96□□□□□ -1.78
NKX6-1P78426 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.96□□□□□ -1.78
NKX6-1P78426 AC092794.2-201ENST00000620933 563 ntBASIC3.96□□□□□ -1.78
NKX6-1P78426 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.96□□□□□ -1.78
NKX6-1P78426 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
NKX6-1P78426 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NKX6-1P78426 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC3.96□□□□□ -1.78
NKX6-1P78426 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
NKX6-1P78426 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NKX6-1P78426 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NKX6-1P78426 MFSD8-242ENST00000641690 4199 ntBASIC3.95□□□□□ -1.78
NKX6-1P78426 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.95□□□□□ -1.78
NKX6-1P78426 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NKX6-1P78426 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
NKX6-1P78426 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NKX6-1P78426 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
NKX6-1P78426 RNU1-20P-201ENST00000363314 162 ntBASIC3.95□□□□□ -1.78
NKX6-1P78426 HSPE1P8-201ENST00000406997 288 ntBASIC3.95□□□□□ -1.78
NKX6-1P78426 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.95□□□□□ -1.78
NKX6-1P78426 RNA5SP104-201ENST00000410989 118 ntBASIC3.95□□□□□ -1.78
NKX6-1P78426 RPL21P111-201ENST00000418453 477 ntBASIC3.95□□□□□ -1.78
NKX6-1P78426 RPL7P46-201ENST00000425129 740 ntBASIC3.95□□□□□ -1.78
NKX6-1P78426 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.95□□□□□ -1.78
NKX6-1P78426 RPS29P17-201ENST00000430795 166 ntBASIC3.95□□□□□ -1.78
NKX6-1P78426 AL121601.2-201ENST00000438019 707 ntBASIC3.95□□□□□ -1.78
NKX6-1P78426 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.95□□□□□ -1.78
NKX6-1P78426 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.95□□□□□ -1.78
NKX6-1P78426 AL118520.1-201ENST00000450770 291 ntBASIC3.95□□□□□ -1.78
NKX6-1P78426 SNRPGP5-201ENST00000456003 220 ntBASIC3.95□□□□□ -1.78
NKX6-1P78426 RPL21P8-201ENST00000465083 535 ntBASIC3.95□□□□□ -1.78
NKX6-1P78426 AC139783.2-201ENST00000504847 1145 ntBASIC3.95□□□□□ -1.78
NKX6-1P78426 AC091885.1-201ENST00000506658 268 ntBASIC3.95□□□□□ -1.78
NKX6-1P78426 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.95□□□□□ -1.78
NKX6-1P78426 SNORA31.3-201ENST00000516029 96 ntBASIC3.95□□□□□ -1.78
NKX6-1P78426 RNU6-123P-201ENST00000516163 102 ntBASIC3.95□□□□□ -1.78
NKX6-1P78426 Y_RNA.702-201ENST00000516843 96 ntBASIC3.95□□□□□ -1.78
NKX6-1P78426 CENPUP1-201ENST00000526649 1202 ntBASIC3.95□□□□□ -1.78
NKX6-1P78426 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.95□□□□□ -1.78
NKX6-1P78426 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.95□□□□□ -1.78
NKX6-1P78426 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.95□□□□□ -1.78
NKX6-1P78426 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.95□□□□□ -1.78
NKX6-1P78426 AC015912.2-201ENST00000571053 181 ntBASIC3.95□□□□□ -1.78
NKX6-1P78426 AC008521.1-201ENST00000587471 187 ntBASIC3.95□□□□□ -1.78
NKX6-1P78426 AL138889.2-201ENST00000603883 242 ntBASIC3.95□□□□□ -1.78
NKX6-1P78426 AL357078.3-201ENST00000607528 618 ntBASIC3.95□□□□□ -1.78
NKX6-1P78426 AC063943.3-201ENST00000615562 356 ntBASIC3.95□□□□□ -1.78
NKX6-1P78426 AC006504.8-201ENST00000621046 635 ntBASIC3.95□□□□□ -1.78
NKX6-1P78426 AC010338.1-201ENST00000621823 717 ntBASIC3.95□□□□□ -1.78
NKX6-1P78426 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.95□□□□□ -1.78
NKX6-1P78426 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.95□□□□□ -1.78
NKX6-1P78426 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NKX6-1P78426 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NKX6-1P78426 AC103710.2-202ENST00000641454 2853 ntBASIC3.95□□□□□ -1.78
NKX6-1P78426 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC3.95□□□□□ -1.78
NKX6-1P78426 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
NKX6-1P78426 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NKX6-1P78426 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NKX6-1P78426 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NKX6-1P78426 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
NKX6-1P78426 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
NKX6-1P78426 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NKX6-1P78426 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
NKX6-1P78426 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NKX6-1P78426 RNU1-83P-201ENST00000363426 164 ntBASIC3.94□□□□□ -1.78
NKX6-1P78426 RNU6-288P-201ENST00000363690 104 ntBASIC3.94□□□□□ -1.78
NKX6-1P78426 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
NKX6-1P78426 RNA5SP129-201ENST00000410276 118 ntBASIC3.94□□□□□ -1.78
NKX6-1P78426 RNA5SP111-201ENST00000411386 101 ntBASIC3.94□□□□□ -1.78
NKX6-1P78426 CRYBB2P1-203ENST00000415709 538 ntBASIC3.94□□□□□ -1.78
NKX6-1P78426 AC009161.1-201ENST00000417306 376 ntBASIC3.94□□□□□ -1.78
NKX6-1P78426 AC004552.1-201ENST00000419089 348 ntBASIC3.94□□□□□ -1.78
NKX6-1P78426 RPL7AP25-201ENST00000423357 805 ntBASIC3.94□□□□□ -1.78
NKX6-1P78426 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.94□□□□□ -1.78
NKX6-1P78426 AC098614.3-201ENST00000438957 440 ntBASIC3.94□□□□□ -1.78
NKX6-1P78426 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.94□□□□□ -1.78
NKX6-1P78426 RPL7P19-201ENST00000469948 618 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms