Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 DHFRP6-201ENST00000401776 268 ntBASIC2.95□□□□□ -1.94
LMO4P61968 RNA5SP39-201ENST00000411245 120 ntBASIC2.95□□□□□ -1.94
LMO4P61968 MTCO1P17-201ENST00000411522 491 ntBASIC2.95□□□□□ -1.94
LMO4P61968 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
LMO4P61968 SPA17P1-201ENST00000416656 452 ntBASIC2.95□□□□□ -1.94
LMO4P61968 AC012065.2-201ENST00000421295 375 ntBASIC2.95□□□□□ -1.94
LMO4P61968 AL158156.1-201ENST00000422509 473 ntBASIC2.95□□□□□ -1.94
LMO4P61968 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
LMO4P61968 MTCO1P20-201ENST00000425366 358 ntBASIC2.95□□□□□ -1.94
LMO4P61968 RPL21P66-201ENST00000426566 466 ntBASIC2.95□□□□□ -1.94
LMO4P61968 ISCA1P6-201ENST00000427740 390 ntBASIC2.95□□□□□ -1.94
LMO4P61968 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.95□□□□□ -1.94
LMO4P61968 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC2.95□□□□□ -1.94
LMO4P61968 RPL23AP74-201ENST00000437246 471 ntBASIC2.95□□□□□ -1.94
LMO4P61968 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.95□□□□□ -1.94
LMO4P61968 U3.44-201ENST00000458938 192 ntBASIC2.95□□□□□ -1.94
LMO4P61968 RPL9P32-201ENST00000464118 620 ntBASIC2.95□□□□□ -1.94
LMO4P61968 AC008155.2-201ENST00000464337 397 ntBASIC2.95□□□□□ -1.94
LMO4P61968 AP000852.1-201ENST00000472460 573 ntBASIC2.95□□□□□ -1.94
LMO4P61968 AC025518.1-201ENST00000479856 347 ntBASIC2.95□□□□□ -1.94
LMO4P61968 MTND1P3-201ENST00000484956 952 ntBASIC2.95□□□□□ -1.94
LMO4P61968 MTCYBP18-201ENST00000501056 747 ntBASIC2.95□□□□□ -1.94
LMO4P61968 TMEM251P1-201ENST00000503717 318 ntBASIC2.95□□□□□ -1.94
LMO4P61968 KCTD9P5-201ENST00000504141 1170 ntBASIC2.95□□□□□ -1.94
LMO4P61968 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.95□□□□□ -1.94
LMO4P61968 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.95□□□□□ -1.94
LMO4P61968 RNU6-875P-201ENST00000516488 106 ntBASIC2.95□□□□□ -1.94
LMO4P61968 RNU2-46P-201ENST00000517038 113 ntBASIC2.95□□□□□ -1.94
LMO4P61968 RNU6-1073P-201ENST00000517182 106 ntBASIC2.95□□□□□ -1.94
LMO4P61968 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.95□□□□□ -1.94
LMO4P61968 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.95□□□□□ -1.94
LMO4P61968 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.95□□□□□ -1.94
LMO4P61968 OR4P1P-201ENST00000530808 1136 ntBASIC2.95□□□□□ -1.94
LMO4P61968 AC109635.4-202ENST00000531666 412 ntBASIC2.95□□□□□ -1.94
LMO4P61968 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
LMO4P61968 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.95□□□□□ -1.94
LMO4P61968 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC2.95□□□□□ -1.94
LMO4P61968 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.95□□□□□ -1.94
LMO4P61968 AL157687.1-201ENST00000554853 619 ntBASIC2.95□□□□□ -1.94
LMO4P61968 NCAPGP2-201ENST00000557911 754 ntBASIC2.95□□□□□ -1.94
LMO4P61968 AL157394.1-201ENST00000562983 1224 ntBASIC2.95□□□□□ -1.94
LMO4P61968 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.95□□□□□ -1.94
LMO4P61968 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.95□□□□□ -1.94
LMO4P61968 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.95□□□□□ -1.94
LMO4P61968 LARP7P2-201ENST00000575306 125 ntBASIC2.95□□□□□ -1.94
LMO4P61968 AC060780.3-201ENST00000589464 80 ntBASIC2.95□□□□□ -1.94
LMO4P61968 AL117336.2-201ENST00000602435 335 ntBASIC2.95□□□□□ -1.94
LMO4P61968 RPL23AP92-201ENST00000603609 255 ntBASIC2.95□□□□□ -1.94
LMO4P61968 AC011816.2-201ENST00000607089 556 ntBASIC2.95□□□□□ -1.94
LMO4P61968 AL020991.1-201ENST00000612314 373 ntBASIC2.95□□□□□ -1.94
LMO4P61968 U4.6-201ENST00000621618 127 ntBASIC2.95□□□□□ -1.94
LMO4P61968 AC009033.1-201ENST00000624279 431 ntBASIC2.95□□□□□ -1.94
LMO4P61968 U6.101-201ENST00000637707 76 ntBASIC2.95□□□□□ -1.94
LMO4P61968 MTND4P12-201ENST00000498999 1377 ntBASIC2.95□□□□□ -1.94
LMO4P61968 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
LMO4P61968 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
LMO4P61968 AC008725.1-201ENST00000605123 2263 ntBASIC2.95□□□□□ -1.94
LMO4P61968 AC004925.1-201ENST00000624256 2706 ntBASIC2.95□□□□□ -1.94
LMO4P61968 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
LMO4P61968 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC2.95□□□□□ -1.94
LMO4P61968 STK31-205ENST00000433467 3085 ntTSL 2 BASIC2.94□□□□□ -1.94
LMO4P61968 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.94□□□□□ -1.94
LMO4P61968 AL022578.1-201ENST00000439330 1433 ntBASIC2.94□□□□□ -1.94
LMO4P61968 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
LMO4P61968 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC2.94□□□□□ -1.94
LMO4P61968 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.94□□□□□ -1.94
LMO4P61968 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC2.94□□□□□ -1.94
LMO4P61968 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
LMO4P61968 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
LMO4P61968 Y_RNA.1-201ENST00000352915 104 ntBASIC2.94□□□□□ -1.94
LMO4P61968 RNU4-35P-201ENST00000362588 141 ntBASIC2.94□□□□□ -1.94
LMO4P61968 RNU6-878P-201ENST00000384578 110 ntBASIC2.94□□□□□ -1.94
LMO4P61968 SNORD115.1-201ENST00000391109 76 ntBASIC2.94□□□□□ -1.94
LMO4P61968 RNU6-952P-201ENST00000391164 108 ntBASIC2.94□□□□□ -1.94
LMO4P61968 U3.29-201ENST00000391296 212 ntBASIC2.94□□□□□ -1.94
LMO4P61968 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.94□□□□□ -1.94
LMO4P61968 RN7SKP285-201ENST00000410137 318 ntBASIC2.94□□□□□ -1.94
LMO4P61968 RNU2-37P-201ENST00000410695 177 ntBASIC2.94□□□□□ -1.94
LMO4P61968 USP9YP27-201ENST00000418455 438 ntBASIC2.94□□□□□ -1.94
LMO4P61968 TOMM22P1-201ENST00000418578 312 ntBASIC2.94□□□□□ -1.94
LMO4P61968 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC2.94□□□□□ -1.94
LMO4P61968 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC2.94□□□□□ -1.94
LMO4P61968 AL356535.1-201ENST00000440335 398 ntBASIC2.94□□□□□ -1.94
LMO4P61968 MTND5P14-201ENST00000441481 1267 ntBASIC2.94□□□□□ -1.94
LMO4P61968 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.94□□□□□ -1.94
LMO4P61968 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.94□□□□□ -1.94
LMO4P61968 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.94□□□□□ -1.94
LMO4P61968 C1DP4-201ENST00000455429 424 ntBASIC2.94□□□□□ -1.94
LMO4P61968 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.94□□□□□ -1.94
LMO4P61968 RPL21P10-201ENST00000463521 490 ntBASIC2.94□□□□□ -1.94
LMO4P61968 RPL21P104-201ENST00000464143 478 ntBASIC2.94□□□□□ -1.94
LMO4P61968 RPS4XP10-201ENST00000465034 731 ntBASIC2.94□□□□□ -1.94
LMO4P61968 AC010285.1-201ENST00000470580 392 ntBASIC2.94□□□□□ -1.94
LMO4P61968 AC023598.1-201ENST00000472521 361 ntBASIC2.94□□□□□ -1.94
LMO4P61968 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
LMO4P61968 RBM43P1-201ENST00000476891 1081 ntBASIC2.94□□□□□ -1.94
LMO4P61968 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
LMO4P61968 RPL32P34-201ENST00000486380 400 ntBASIC2.94□□□□□ -1.94
LMO4P61968 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2.94□□□□□ -1.94
LMO4P61968 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms